Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 105 1e-17 >seq4 Length=195412 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 46622 ACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAA 46681 |||| | || ||||| |||| |||||||||||||| | ||| | |||||| Sbjct 71386 ACATGAGGCAGGCAAAGTCACGGTGAAGGCCTTCATCGCGGGAAATCAGTTCGTTGCTGT 71327 Query 46682 ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG 46741 ||||| |||||||| || || ||||| ||||||||||| || || ||||| || |||| Sbjct 71326 GAGTGAGTCCAGGCATGAGGCCTCGCTTCTTGAGCCAAAAGATGGCAGCGAACGACCCAG 71267 Query 46742 AAAAGAATATGCCTTCTACAGCCGCGAATGCGACAA 46777 | ||||| || ||||| || || ||||| |||| || Sbjct 71266 AGAAGAAGATTCCTTCAACGGCGGCGAACGCGATAA 71231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712908876948480