Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq1458 150 5e-32 seq2599 87.8 5e-13 >seq1458 Length=11418 Score = 150 bits (166), Expect = 5e-32 Identities = 199/276 (72%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACC 26985 || |||||| ||||| || || || |||||| |||||||||||| ||| | | Sbjct 11160 GACTTCAGTCGTGTAACGATCCTGACCACTCTGATCCTGCCATTTACGGGTCTGCAAAGC 11101 Query 26986 GCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTT 27045 ||||| || | |||| |||||| |||||||| |||||||||| ||| ||||| || Sbjct 11100 ACCTTCGATATAGACCTGAGAGCCTTTACGCAGGTACTCACCAGCGACTTCTGCCAGTTT 11041 Query 27046 GCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATC 27105 ||||| ||||| || ||||||||||| || | |||| | || || || |||||| Sbjct 11040 ACCGAACATGACCACTCGGTGCCATTCGGTTTTCTCTCTCATCTCACCGGTTTGCTTATC 10981 Query 27106 TTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTA 27165 ||| | |||| ||||| | | | ||||||||||| ||||| |||||| || Sbjct 10980 ACGCCAGCTCTCGGACGTGGCCAGAGTAATGTTGGCAACTGCTCCACCATTCGGCATATA 10921 Query 27166 GCGCACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 ||| ||||| ||||| | || |||||||| | ||| Sbjct 10920 GCGAACTTCCGGATCCTGCCCCAAATTACCCACTAA 10885 >seq2599 Length=15424 Score = 87.8 bits (96), Expect = 5e-13 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 26987 CCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTG 27046 || ||||| | | || ||||||||| | ||| |||||||| || | ||| ||||| || Sbjct 114 CCCTCAATATAAATCTGGCTGCCTTTCCTCAGATATTCACCGGCAACTTCTGCCAGTTTT 173 Query 27047 CCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCT 27106 ||||| | || || ||||||||||| || | || | | || |||| ||| ||| Sbjct 174 CCGAACAGAACCACACGGTGCCATTCTGTTTTTTCCCTCAGCTCACCTGATTGCTTGTCT 233 Query 27107 TTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAG 27166 ||||| ||| | || || | ||| ||||| ||||||||||| || ||| Sbjct 234 TTCCATGCTTCAGAGGTAGCCAGTGTGATATTGGTGACTGCGCCACCATTGGGTGAGTAA 293 Query 27167 CGCACTTCTGGATCGTTGCCTAAATTACCGA 27197 || ||||| || || | ||||| | ||||| Sbjct 294 CGTACTTCCGGGTCTTGACCTAAGTGACCGA 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134011442115840