Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq2814 762 0.0 seq2599 84.2 6e-12 >seq2814 Length=35408 Score = 762 bits (844), Expect = 0.0 Identities = 1610/2367 (68%), Gaps = 70/2367 (3%) Strand=Plus/Minus Query 9153 GGGGTGAGTGATGGCTTCTGTTGTCGAGATCTGCAACCGCGCGCT--GTCGAATATCGGC 9210 ||||||| | ||||| || | | || ||||| ||| ||||| | || ||| || Sbjct 12962 GGGGTGAATAATGGCCTCAGAAATTGAAATCTGTAACTTAGCGCTTAGCCG--TATTGGT 12905 Query 9211 AACAGCCGCAGCATTAACAGCCTGACGGAAGCCAGCAAAGAGGCGGGGGAGTGCTCCCTG 9270 || ||||| |||||||||||| | ||| |||||||| |||| | | ||| | Sbjct 12904 AATAGCCGATTCATTAACAGCCTTAGCGAAAAGAGCAAAGAAGCGGAGCAATGCAATTTA 12845 Query 9271 CATTTCGATGCTTGCCGCGATTCTGTTCTGTCAGACTTTGACTGGAACTTTGCCACCAAA 9330 || ||| || |||||||||| || || || || ||| ||||||||||||| || Sbjct 12844 CACTTCAATCATTGCCGCGATACTACGCTATCTGATTTTCCGTGGAACTTTGCCAGTAAG 12785 Query 9331 CGCCTGGCGCTTGCCGATACGAATAACCCGCCGCCTGACTGGGCGTATGCGTACCAGTAT 9390 ||| | || | || ||||| || ||||| ||||| |||||| || ||| ||| || Sbjct 12784 CGCGTTGCTTTGGCTGATACCAACAACCCACCGCCAGACTGGAAGTTTGCCTACAGCTAC 12725 Query 9391 CCGTCTGATTGTCTGC--GCATCACTGA--AATCATGCTTCCCGG---TGTGCGAAACCC 9443 || | || ||| | ||| | | | ||| || || | | | | | || Sbjct 12724 CCAACCGACTGTTTAAAGGCAATAGCCATTATTCAATCTGGCCAGAAATATCCTCAGCCA 12665 Query 9444 AACTTCTGCAATGCGTGTTCAGTATGAAGTGGGTGCAGATGCAGACGGCACAGGGAAACT 9503 | | |||||| | ||| || |||||| | ||||| ||||| ||||| ||||| Sbjct 12664 CA-TAATGCAATTAAT-TTCT---TG--GTGGGTTCGGATGCTGACGGTACAGGAAAACT 12612 Query 9504 GATTTACACAGACCAGGCGCAGGCATGGCTCAAATATGTAACGCG-CATT-ACTGACGTG 9561 ||||||| |||||| |||| |||||||| |||| | ||| || | || || || Sbjct 12611 GATTTACTGCGACCAGCCGCAAGCATGGCTTCAATAC--ACTGCGTCAGTCACCGATGTA 12554 Query 9562 AATATGTTCGATTCCATTTTCATGGAGGCGCTGGCGTGGCGTCTGGCGGCCGCCATCAAC 9621 ||||| || || || | ||||| || |||||||| |||||| | || | || | | | Sbjct 12553 AATATATTTGACTCATTATTCATTGATGCGCTGGCATGGCGTTTAGCTGGCGAACT-AGC 12495 Query 9622 ATGGCGCTGACCGGC----AATGCTGATCTCGGCACATTTGCCCTCAACATGTACAACCG 9677 | ||| | ||| ||||||| | || | | || | | ||||||| | Sbjct 12494 A---CGCCCATTGGCTTCTAATGCTGGTATCAGTAGTGAAGCATTTCAGATGTACA-CAA 12439 Query 9678 CGT-GATCCTTAGCGCTGGCTCCCATAGCCAGAACGAATCACAGGAGCCGCA-GCCGCCA 9735 || ||| || ||||| | ||| || | |||||| ||||| | | || Sbjct 12438 TGTCGATTGCTAATGCTGGTGCGCATTCCCTTGATGAATCATCAGAGCCTAACGATTACA 12379 Query 9736 GTGGATGAATTTACTGTAGCGAGGTTGTCCTGATGGCTATCAGTTGGATCCAGCCCAGCT 9795 |||| ||| || | ||||||||| || | |||||| || || || || || | Sbjct 12378 -TGGACCCATTCACCGAAGCGAGGTTATCGTAATGGCTTATAGCATCATTCAACCGAGTT 12320 Query 9796 TTGCCGGTGGCGAAATTGGCCCGTCGCTGTACGGGCGTATCGACATGGCGAAATACCAGG 9855 || | ||||||||||| | || || || |||||||| || | || |||||| Sbjct 12319 TTTCTGGTGGCGAAATCGCACCTAGCCTTTATGGGCGTATTGATCTAGCAAAATACTCTA 12260 Query 9856 TGGCATTGCGCAAATGCGATAACTTTATCGTGCGTCAGTATGGCGGCGTGGAGAATCGCC 9915 || || || || || || |||||| | |||||||| ||||||||| | || ||| | | Sbjct 12259 CCGCTTTACGTAAGTGTGAAAACTTTCTTGTGCGTCAATATGGCGGCATTGAAAATAGAC 12200 Query 9916 CGGGGACGCGTTTTGTCGGTGCCGCAAAATATGCTAACCGCAAATGCCGACTGATCCCGT 9975 | || || ||| | | || |||||||| ||||| |||||||| ||||||||| Sbjct 12199 CAGGAACTAAGTTTATTGCGGCGGCAAAATACCCTAACAAGAAATGCCGCTTGATCCCGT 12140 Query 9976 TCCAGTTCTCTACTGTTCAGACCTATGCGCTGGAGTTCGGTCACCAGTACATGCGCGTTA 10035 |||||||| || || || || || || || || | ||| | ||||||||||||| | Sbjct 12139 TCCAGTTCAGCACCGTGCAAACTTACGCCCTTGAAATGGGTGATAAGTACATGCGCGTGA 12080 Query 10036 TCAAAGATGGCGCGCTGGTGCTGAA--CAG-CAG------CAA---CGTTATTTATGAGA 10083 |||| || || | || |||||| | ||| ||| ||| || || | || Sbjct 12079 TCAAGGACGGTGGGCAGGTGCTTTATGCAGACAGTGAGCACAAGGGCGAAATATTCGAAC 12020 Query 10084 TCGCTACGCCATACGCTGAAGCCGATCTCTTTCGCATCAAGTTCACCCAGAGCGCTGACG 10143 | || || || || ||| | ||||| || | || || || ||| || |||| Sbjct 12019 TTGCAACACCTTATAACGAATCTGATCTATTCAATTTAAAATTTACACAGTCAGCAGACG 11960 Query 10144 TTCTGACGCTGGTACACCCGTCTTACCCTCCAAAAGAATTGCGCCGCTACGCTCATGACA 10203 | |||| | ||||| | ||| || || | ||| | | ||||| | ||||||| Sbjct 11959 TAATGACTATCGTACATGCTGATTATCCACCGATGGAACTACAGCGCTATGATCATGACG 11900 Query 10204 ACTGGCAACTCGTCGATGTAACGACGAAGAATGGTCCGTTTGAAGATATCAACGTTGATG 10263 | ||| |||| || ||| ||| ||||| || || |||||||||||| ||| Sbjct 11899 ATTGGAAACTAGTTCCTGTTGAAACGCGCAATGGCCCATTCGAAGATATCAACACGGATA 11840 Query 10264 A-GTCTGTAACTGTGTATGCCAGTGCCAGCACCGGGACAATAACGCTGACGGCGAGCTCT 10322 | | |||| | |||| || ||||| || || ||||||||||||| | | Sbjct 11839 AAGAGCGTAAGC-TATATGTTAGCGCCAGTACAGGTGATGTAACGCTGACGGCAACGCAT 11781 Query 10323 GCTATCTTCGGCGCTGAGCAGGTGGGGAAATTATTCTACCTTGAGCAGCCAGCGGTTGAT 10382 |||||| || ||||| ||| || ||| | | || ||||||||| ||| ||||| Sbjct 11780 AATATCTTTGGTGCTGAATTGGTTGGCAAACAAATTTATATTGAGCAGCAAGCAATTGAT 11721 Query 10383 TCAGTTCCGGTATGGGAAACTGATAAGACAACTGCAATTAATGATATTCGCCGCGCTGAC 10442 | || || || ||||||||||| ||||||||| |||||||| ||||| || | Sbjct 11720 GCTGTACCAGTTTGGGAAACTGACAAGACAACTAACGTTAATGATCAACGCCGTGCAGGT 11661 Query 10443 AGCAACTACTATCGTGCGAACACTGCCGGTAAAACCGGGACACTTCGACCATCTCACACT 10502 || ||||| || || || ||||| ||||||| ||| ||| | | ||||| ||||| Sbjct 11660 GCTAATTACTACCGAGCTAATACTGCAGGTAAAAGCGGAACATTAAGGCCATCACACACA 11601 Query 10503 GAAGGTATGGCGTGGGATGGGTGGGGAGGTGATACAGGTATCCAGTGGGAATACCTGCAT 10562 ||||||||| |||||||||||||| ||||| | ||||| |||||||||||||| ||| Sbjct 11600 GAAGGTATGAGCTGGGATGGGTGGGGCGGTGACGCTGGTATTCAGTGGGAATACCTTCAT 11541 Query 10563 AGTGGTTTTGGTATCGTCCGCATTACGGCCGCCAGCGGAACAACGGC--AACAGCCACGG 10620 |||||||| || ||||| || | | | ||| | |||| |||||| |||| Sbjct 11540 AGTGGTTTCGGCATCGTTAAAATCAATTCTGTTAGC--ACTGACGGTTTAACAGCTACGG 11483 Query 10621 ------TACTTTATTACATTCCATCACAAGTAGTTGGATCCGCTAATGCCAGCTACAAGT 10674 | ||| |||||||||||| | | ||||| | || || | ||||||| Sbjct 11482 GTAAAGTTGTTTCATACATTCCATCAAATGCCGTTGGTGAAGAAAACGCTACGTACAAGT 11423 Query 10675 GGGCAAAGTACGCATGGAACAGCGTTAACGGCTACCCTGGCACTGTCGTCTATTATCAGC 10734 |||| | | ||||| || |||||||||| ||||||| | |||||||||| Sbjct 11422 GGGCTCGTTCGGTTTGGAATGATGTAGACGGCTACCCAAGCACTGTTATGTATTATCAGC 11363 Query 10735 AGCGTCTGTATTTCGCTGCCTCGACAGCATTCCCGCAGACAATCTGGGCGAGTCGTACCG 10794 |||| | | ||| |||| ||| || | || || || || ||||||||||||| | Sbjct 11362 AGCGGTTATTTTTTGCTGGCTCTCGTGCTTATCCTCAAACGATTTGGGCGAGTCGTAGTG 11303 Query 10795 GTGACTATAAAGACTTCGGCAAGAGCAATCCGACGCAGGACGATGACCGGATCATTTACA 10854 | |||||||||||||| || |||| || || | || || |||||||| ||||| |||| Sbjct 11302 GGGACTATAAAGACTTTGGTAAGAATAACCCCATACAAGATGATGACCGTATCATCTACA 11243 Query 10855 CCTATGCCGGTCGTCAGGTTAACGAGATCCGCCACCTTATTGATATTGGTACGTTGGTGG 10914 ||||||| || || || ||||| || || || ||| | |||||| | ||| || |||||| Sbjct 11242 CCTATGCAGGGCGCCAAGTTAATGAAATTCGTCACTTAATTGATGTGGGTTCGCTGGTGG 11183 Query 10915 CGCTGACATCTGGTGGCGAGTACGTCATTACCGGCGATCAGAATAAAGTGCTTACTCCGT 10974 | | || |||||||| ||||| || || || |||||||| ||||| | || || Sbjct 11182 CCTTAACGTCTGGTGGTGAGTATCAAATCACTGGGGATCAGAACAAAGTATTAACGCCAA 11123 Query 10975 CTGCA--TTCGCTTTCAGTTCTCAGGGTTCCAACGGTTGCAGCAACGTACCTCCCATCGC 11032 ||| ||| |||| ||| || ||| | || || || || |||| || || || || Sbjct 11122 --GCAGTTTCTCTTTTTCTTCGCAAGGTGCTAATGGCTGTAGTGACGTTCCACCTATTGC 11065 Query 11033 CGTTGCTAACATCGCTCTGTTTGTCCAGGAAAAGGGCAGCGTGGTCCGTGATCTCGCCTA 11092 |||||| || || || ||| |||||||||| || |||| || ||||| ||||| || Sbjct 11064 CGTTGCCAATATTGCCTTGTACATCCAGGAAAAAGGTAGCGCAGTGCGTGACCTCGCATA 11005 Query 11093 TTCATTTGATGTCGACGGATATCAGGGTAATGACCTGACCATTCTGGCTAACCATCTTTT 11152 |||||| || || ||||| || || |||| || | ||||| ||||||| || || || Sbjct 11004 TTCATTCGACGTTGACGGGTACCAAGGTACCGATTTAACCATCATGGCTAATCACCTATT 10945 Query 11153 CCA--GAAACGCAGCATTGTTGACTGGTGTTTCTCTATCGTTCCGTACTCCAGCGCCTTT 11210 || | || ||| ||| |||| ||| || ||||||||||| ||||| | |||| Sbjct 10944 TCAACGCCAC-CAG-ATTATTGATTGGGCGTTTTCTATCGTTCCTTACTCAATAGCCTGG 10887 Query 11211 TGCATTCGTGATGATGGAAAGTTGCTGGTGATGACCTATCTGCGTGATCAGCAGGTGTTT 11270 || |||||||||||||| || ||||| |||| || ||| | || ||||| |||||| Sbjct 10886 TGTATTCGTGATGATGGTAAATTGCTTTCATTGACGTACCTGAGAGAGCAGCAAGTGTTT 10827 Query 11271 GCATGGGCGCCACAGTCCAGCGCCGGGAAATACGAAAGCACATGCAGCATCAGTGAAGGG 11330 || ||||||||||| | | |||| ||| ||| || ||||| ||||||||||| Sbjct 10826 GCTTGGGCGCCACAAGAAACTGACGGGCAATTTGAATCAACTTGCAGTATCAGTGAAGGC 10767 Query 11331 AATGAAGATGCGGTGTATTTCATCGTCAACCGCACAATCAACGGTCAGGTA--GTCAGAT 11388 |||||||||||||| || ||||| || ||| | | | || |||| || | | Sbjct 10766 AATGAAGATGCGGTTTACTTCATTGTGTGCCGTAAAGTTGGTGG--CGGTACCGTACGTT 10709 Query 11389 ACATCGAGCGACTTTCGAGTCGCATGTTTACCAACGATGAAGATGCGTTCTTTGTTGATT 11448 |||| ||||| | ||||| | |||||||| || ||||| ||||||||||||| Sbjct 10708 ACATAGAGCGTTTAAGTAGTCGTCTATTTACCAAAACAGAGGATGCTTTCTTTGTTGATT 10649 Query 11449 CAGGGCTGAGTTATGACGGGCGTAACA 11475 |||| || || |||||||| | |||| Sbjct 10648 CAGGCCTTAGCTATGACGGAAGAAACA 10622 Score = 524 bits (580), Expect = 2e-144 Identities = 956/1383 (69%), Gaps = 30/1383 (2%) Strand=Plus/Minus Query 526 TCAAGAAAATAAAATGGCCTGACAAGGTGAAGAACCTCGAACTCATTGGTAAGCACGTCG 585 |||||||| | || | | ||||||||||||| | || || | ||||||||||| | Sbjct 19816 TCAAGAAAGTTAAGTTACTCGACAAGGTGAAGATATTAGAGCTTGTCGGTAAGCACGTTG 19757 Query 586 ACATCAACGCTTTCAAAGAGCGCCTGGAGGTTTCAGGTAC-TGTCACGATTGCCGACCGC 644 || | ||||| ||| |||||| | |||||| ||| || ||| || | Sbjct 19756 ACGTTAACGCATTCCGTGAGCGC-------TATCAGGTCGATGTAACTATTTCC-----C 19709 Query 645 ATGGCGA-AAGCCCGCCGCCGC--GTTAAAGAGCAGGCTGGTGGTGAAGAATGACGGACG 701 || || ||| || || || || | | || |||||||||| ||||| || | Sbjct 19708 TTGCTGATAAGTTGGCAGCAGCCCGTAAGCGTGCCA-CTGGTGGTGAGCAATGATTGAAG 19650 Query 702 CCGCTATGTCGCCGGAAGAGCAACTCGTCGAGGATATCG-CATCATTCACGTATGACCCA 760 || ||||| || ||||| ||||| | | ||||||| ||| || ||| ||||||| Sbjct 19649 CC---ATGTCACCAGAAGAACAACTGATTAACGATATCGGCATGTTT-ACGCATGACCCG 19594 Query 761 CTGGGCTATGCGCTGTATGCATTTCCTTGGGGCGAGGATGGTACAGAACTGGCACACGCC 820 | ||||||| || ||||| ||||||||||| || | |||||| ||||| | | | || Sbjct 19593 TTAAGCTATGCACTATATGCTTTTCCTTGGGGGGAAGCTGGTACCGAACTTGAAAATGCA 19534 Query 821 ACCGGACCACGCAAGTGGCAGGCTGATGCATTCCGCGAGATACGTGATCACCTCCAGAAT 880 | || || || | ||||| || ||| | || || ||| |||| || | | ||| Sbjct 19533 AGTGGGCCTCGTCAATGGCAAGCCGATACGTTAAATGAAATAGGTGAACATTTACGTAAT 19474 Query 881 CCTGCTACCCGTCACCAGCCGCTGATGCTGGCCCGAGCATCCGGACACGGTATCGGTAAA 940 |||| || || ||||| | || | | ||||| || |||||||| || ||| Sbjct 19473 CCTGAAACGCGATTTCAGCCATTATTGATATCTGTCGCATCAGGTCACGGTATTGGGAAA 19414 Query 941 TCAGCGTTTATCTCGATGCTGATCAACTGGGGCATGTCCACCTGCGAGGACTGCAAGGTA 1000 ||| || |||||| | ||||| ||||||||| ||||||||| || || ||||| Sbjct 19413 AGTGCGAACATATCGATGATCATCAAGTGGGGCATGGACACCTGCGAAGATTGTAAGGTG 19354 Query 1001 GTGGTCACCGCGAACACCGACAATCAGTTGCGTACAAAAACATGGCCTGAAATCATCAAG 1060 || ||||| || |||||||| || ||| | || || ||||||||||| ||||| ||| Sbjct 19353 GTTGTCACTGCTAACACCGAAAACCAGCTACGAACTAAAACATGGCCAGAAATTGCGAAG 19294 Query 1061 TGGTCGAACCTTGCTATCACGAAAGAGTGGTTTACCTGCACCGCCACAGCGATGTACAGC 1120 ||| ||| ||||||| || || |||||||||||||| ||||| || ||| | Sbjct 19293 TGGCAACGCCTATCTATCACCAAGGACTGGTTTACCTGCACAAAAACAGCTATCTACTCC 19234 Query 1121 AACGATCCGGGACACGATAAACGCTGGCGCGCTGACGCTATTCCATGGTCTGAGCACAAC 1180 || || || |||| ||| ||||| ||||| ||| | || ||||| ||| ||||| Sbjct 19233 AATGACCCAAATCACGCTAATGCATGGCGTGCTGATGCTGTGCCGTGGTCAGAGAACAAC 19174 Query 1181 ACTGAAGCATTCGCCGGGCTGCACAACGAGCGCAAGCGCATCATCGTGGTATTCGACGAA 1240 || || |||||||| |||||||| || || ||||||||||||| | | ||||| || Sbjct 19173 ACAGAGGCATTCGCAGGGCTGCATAATCAGGGCAAGCGCATCATTCTAATTTTCGATGAG 19114 Query 1241 GCCTCAAACATTGCCGATCTGGTGTGGGAGGTTGCCGAGGGTGCGCTGACGGACGAGGAC 1300 || ||||||||||| ||||| |||||||| || || |||||||| |||| || ||| | Sbjct 19113 GCTTCAAACATTGCGGATCTTGTGTGGGAAGTCGCTGAGGGTGCTTTGACAGATGAGAAT 19054 Query 1301 ACCGAAATCATCTGGGTGGCGTTCGGTAACCCGACGCGTAACACCGGGCGTTTCCGCGAG 1360 || |||||||||||| | ||||| ||||||||||| |||||||| ||||||||||||||| Sbjct 19053 ACAGAAATCATCTGGATAGCGTTTGGTAACCCGACACGTAACACAGGGCGTTTCCGCGAG 18994 Query 1361 TGCTTCCGCAAATACCGGCATCGCTGGAAGTGCGCGCAGATTGACAGCCGCACCGTTGAG 1420 || ||||| || | ||| |||||||| ||||||||| ||||| || ||||| Sbjct 18993 TGTTTCCGTAAGTTTAAGCACCGCTGGAAAACTAAGCAGATTGATAGCCGTACGGTTGAA 18934 Query 1421 GGCACCAACAAAGAGCAACTGCAAAAGTGGGTGGACGACTACGGCGAAGACAGCGACTTC 1480 ||||| |||||||| || | | || ||| | || ||| ||||| || |||||||| Sbjct 18933 GGCACGAACAAAGAACAGATTGATAAATGGATTGAAGACCGGGGCGAGGATAGCGACTTT 18874 Query 1481 GTGAAGGTGCGTGTACGCGGCATCTTCCCTGACGCGTCTGAAAACCAGTTTATTCCGTCA 1540 || || || ||||| ||||| |||||||| | ||||||| || || || || | Sbjct 18873 GTTAAAGTTCGTGTGCGCGGTATCTTCCCATCAACCTCTGAAACTCAATTCATACCTACT 18814 Query 1541 GGCCTGACACAGCCTGCTGTGGGTCGGGTGATTACTCCGGCACAGGT-TCAGCATGCGGC 1599 ||| | || | | || || || | || | || | || ||| || || | Sbjct 18813 GGCTTAACTGATGCAGCCATGAAGCGCACAGTAACGCAAGCCGAAGTATCA-CACGCACC 18755 Query 1600 TGTAGTGCTTGGCGTTGACCCTTCGCACCAGGGTAAAGACCCGGCGGTGATTTATCTTCG 1659 | | | |||||||||||| | || ||| | || ||||| |||||| | || Sbjct 18754 AATTATCATAGGCGTTGACCCTGCATACTCCGGTGATGATGATGCGGTTATTTATTTACG 18695 Query 1660 TCAGGGGCTGCACTGCAAGAAGCTG-GGA-GAGTACCCGCGCACAACTGATGATGTCTGG 1717 || || |||||| |||| ||| ||| | ||| | || ||||| ||| || | Sbjct 18694 CCAAGGACTGCACAGCAAATGCCTGTGGACGGGTAAC--AAAACTACTGACGATATC-GT 18638 Query 1718 TTTGCCAAGGTG-ATCGCCGACTTCGAAGATCAGTATCACGCTGACGCTGTGTTTATCGA 1776 | || ||| | | || || |||| || ||||||||||| ||||| ||||| |||||| Sbjct 18637 TATGGCAAAGCGTATTGCTGACTATGAGGATCAGTATCAGGCTGATGCTGTACATATCGA 18578 Query 1777 CTATGGATACGGGACTGGCCTGAAGTCAGTCGGTGATAACTGGGGGCGCTCATGGACGCT 1836 || ||| || || || || | | || || ||| | |||||||| ||| ||| Sbjct 18577 CTTTGGCTATGGTACGGGTATTTATTCTGTTGGTATGAGTTGGGGGCGTGATTGGCAGCT 18518 Query 1837 GATACTGTTCGGCGGCGGAACGGCAGATCCTGAGATGGGTAACAAGCGCGGGGAGATGTA 1896 | | ||| |||| | | | || || | ||| ||||||||||| || ||||| Sbjct 18517 TGTGCAATTCAATGGCGCATCAACTGACCCACAAATGCAAAACAAGCGCGGTGAAATGTA 18458 Query 1897 CAA 1899 || Sbjct 18457 TAA 18455 Score = 480 bits (532), Expect = 2e-131 Identities = 907/1324 (69%), Gaps = 10/1324 (1%) Strand=Plus/Minus Query 4325 AAACAGTTCGCACAGCTTGAAAGCGAGCGCCAGTCGTTCGAGCCACACTGGCGAGAGTTG 4384 ||||| || | |||||| | | |||||||| || || ||||| |||||| |||| | Sbjct 17748 AAACAACTCTCGCAGCTTAAGAATGAGCGCCAATCATTTGAGCCGCACTGGAAAGAGCTT 17689 Query 4385 AGTGATTACATCAATCCTCGTGGTTCCCGCTTCCTGACATCAGAGGCAAACCGTAACGAC 4444 || || | |||||| | | || || |||||||| | || || || Sbjct 17688 GCAGAGTATACGCGCCCTCGTAGCACTCGTTTTAACACATCAGAAGTTAATCGCGGTGAT 17629 Query 4445 CGCCGAAACACGCGGATCATCGACTCAACCGGCA-CTATGGCGGCGCGTACTCTTGCCAG 4503 | || || ||| ||||| ||| ||| || ||| | | ||||||| | | || Sbjct 17628 AGACGTAATACGAAAATCATTGAC-CAAGAAGCGGCTAAATCAGAGCGTACTTTATCAAG 17570 Query 4504 TGGCATGATGTCAGGCATCACCAGCCCTGCGCGTCCGTGGTTCCGCCTGGCGACACCTGA 4563 ||||||||||||||| || |||||||| || ||| |||||||| | || ||||| || Sbjct 17569 TGGCATGATGTCAGGGATAACCAGCCCCGCCCGTAAATGGTTCCGTTTAGCTACACCAGA 17510 Query 4564 TCCGGATATGATGGATTATGGCCCGGTCAAGTTGTGGCTGGAGACGGTACAGAACCGCAT 4623 ||| || |||||| | ||| |||| ||||| ||||||| || ||| || | ||||| Sbjct 17509 TCCTGACATGATGAACTATAGCCCTGTCAAAATGTGGCTTGAAGTGGTTGAGCAGCGCAT 17450 Query 4624 GAACGATATGTTCAACAAGTCGAATCTGTACCAGTCACTGCCTCAGCTTTACGGCAGTCT 4683 ||| || |||||||| || ||| | || |||||||| || || ||| | | | Sbjct 17449 GAATGAAGTGTTCAACCGTTCCAATATCTATCAGTCACTACCGCAAACTTATTCCGATAT 17390 Query 4684 TGGCACATACAGCACCGGCGCAATGGCGGTACTGGATGACGAAGAAGACATTATCCGCAC 4743 ||||| | |||| ||||| | || |||||||| || | || |||| ||||| Sbjct 17389 CGGCACCTTTGCCACCAGCGCATTAGCTGTACTGGAAGATAACGAGCGAGTTATTCGCAC 17330 Query 4744 GATGCCTTTTCCGATCGGCAGTTACTACCTGGCTAACTCCCC-GCGCGGAAGCGTTGATA 4802 |||||||||| | || || || ||| | ||||| || | | || ||||||| Sbjct 17329 TGTGCCTTTTCCAGTAGGTAGCTATTACATTGCTAATGGGCCTGATCTGACA-GTTGATA 17271 Query 4803 CCTGTTTCCGTAAGTTCTCCATGACTGTGCGCCAGCTTGTGCAGGAATTTGGCCTGGACA 4862 ||||||||||| | ||| |||||| ||||||||| | || ||| || || || |||| Sbjct 17270 CCTGTTTCCGTGAATTCAGCATGACGGTGCGCCAGTTGGTTATGGAGTTCGGGCTAGACA 17211 Query 4863 ACGTCAGCGAATCCGTGAAGGGCATGTGGGAAAGCGGCACGTATGAGAAGTGGGTTGAAG 4922 | || || || || || || | ||||| |||| ||| ||||| | | Sbjct 17210 AAGTGAGTGAGCAGGTTAAAAGCCTATGGGACTCTGGCAGCTATAGCCAGTGGATCACCG 17151 Query 4923 TGATGCACTCGGTGTATCCGAACATCAACCGCGATA-CGGCGAAGCTGGACAGCAAGAAC 4981 | || || || || || || || | || ||| | |||| ||||||||| |||||| Sbjct 17150 TCATTCATTCAGTCTACCCAAATTTAAATCGCATCAGCGGC-AAGCTGGACGCTAAGAAC 17092 Query 4982 AAGCCGTATAAATCCGTTTATTACGAGGTCGGCGGCGATAACGATAAGTTGCTGCGCGAA 5041 |||| || |||||||||||| | || | ||||| |||| || | || |||||| Sbjct 17091 AAGCTGTTTAAATCCGTTTACTTTGAAATGGGCGGTGATAGTGAACGCGTTCTACGCGAA 17032 Query 5042 TCCGGCTTCGATGAATTCCCGATCATGGCGCCACGCTGGGAAGTGAACGGTGAAGATGTC 5101 || ||||| ||||||||||| || ||||||||||| |||||||||||||| || || ||| Sbjct 17031 TCTGGCTTTGATGAATTCCCTATTATGGCGCCACGTTGGGAAGTGAACGGCGAGGACGTC 16972 Query 5102 TATGGCTCATCGTGTCCTGGCATGCTGGCGCTTGGTCCGGTTAAAGCGCTGCAACTTCTC 5161 || ||||||||||| || || ||| | ||| | ||| || ||||| |||| || | Sbjct 16971 TACGGCTCATCGTGCCCCGGTATGATTGCGTTAGGTAGCGTGAAAGCATTGCAGCTATTG 16912 Query 5162 CAGAAACGCAAATCTCAGCTGATTGATAAAGCCACTAATCCGCCGATGGTTGGGCCTACT 5221 || || ||| | |||| ||||||||||| ||| ||||| || ||| | |||| | Sbjct 16911 CAACGCCGTAAAGCACAGCAGATTGATAAAGTCACCAATCCACCTATGCAGGCGCCTGCC 16852 Query 5222 TCTCTCAAGAATCAGCGCGTTTCACTCCTCCCTGGTGATATCACCTACATCGACCA--GG 5279 || ||||||||||||| |||| || | ||||||| || || ||| | |||| || Sbjct 16851 TCAATCAAGAATCAGCGTATTTCCCTTGTGCCTGGTGGAATAACTTACTT--ACCAATGG 16794 Query 5280 TGACCGGTCAGGACGGTTTTAAACCCGCATACCTGGTAACTCCCAGCACTGGCGATTTAA 5339 || | | | ||||||| || || ||| || || | || || | Sbjct 16793 CTGGCGCTGACCAAATGATTAAACCGATATTCCAAGTACAGGCCGACATTAACGGCTTGA 16734 Query 5340 TAACCGACATTCAGGACACGCGCCAGACCATCAACAGCGCCTACTTCGTCGATCTGTTCA 5399 | | || ||| || | || | ||||| ||||| ||| || || |||| Sbjct 16733 TTGCTGATATTGGTGATGCTCGTAATCAAATCAAAGAAGCCTATTTCTCTGACCTTTTCA 16674 Query 5400 TGATGCTTCAGAACATCAATACCCGCTCAATGCCGGTGGAAGCGGTGATCGAGATGAAGG 5459 ||||||| ||||||||||| || ||||||||||| |||||||| || ||||| ||||||| Sbjct 16673 TGATGCTACAGAACATCAACACTCGCTCAATGCCAGTGGAAGCAGTTATCGAAATGAAGG 16614 Query 5460 AAGAAAAGCTCCTGATGCTGGGGCCGGTACTGGAACGCCTGAACGACGAATGCCTGAACC 5519 |||||||||| || ||| | ||||| || | | || | | ||| || | Sbjct 16613 AAGAAAAGCTTCTCATGTTAGGGCCTGTCTTACAGCGTTTAGATTCTGAACTACTAGATA 16554 Query 5520 CACTGATTGACCGTGCATTCTCGATGATGGTGCGTAAGAACATGCTGCCACCGCCGCCGG 5579 | ||| | ||| | ||| | || |||| |||||| ||| | | ||| |||||| | Sbjct 16553 AGTTAATTAATCGTACGTTCGCAATCATGGCGCGTAAAAACCTATTACCAGTGCCGCCAG 16494 Query 5580 ACGTGATGGAAGGTATGCCTCTGAAAGTGGAATACATCTCCGTCATGGCTCAGGCGCAGA 5639 | | ||| | ||||||| || ||||| |||||||| ||||||||||| |||||||||| Sbjct 16493 AAGAAATGCAGGGTATGCAGCTTAAAGTTGAATACATTTCCGTCATGGCGCAGGCGCAGA 16434 Query 5640 AGTC 5643 | || Sbjct 16433 AATC 16430 Score = 275 bits (304), Expect = 2e-69 Identities = 624/932 (67%), Gaps = 35/932 (4%) Strand=Plus/Minus Query 6780 GATCAGTTCGGTACGCCGGAACTCAAGACATATCTGAACGATACCGGGCTGGGGAATCAC 6839 ||||||||||||||||| || ||||| |||| | || ||| | ||| | || ||||| Sbjct 15335 GATCAGTTCGGTACGCCAGAGCTCAAACAATATTTAAATGATTCAGGGTTAGGTAATCAT 15276 Query 6840 CCTGATCTGGTTAAGGCGTTCGTG----AAAATCGGTAAGGCCATGTCTGAAGACGGCAT 6895 ||||| |||| ||| | ||||| || ||||||||||| || || || | Sbjct 15275 CCTGA----GTTATTCCGTATTTTTTCAAAAATTGGCAAGGCCATGTCAGAGGATGGTTT 15220 Query 6896 GGTCACCGGTAGTAATGATGGCCAGCGTAGTGCGGCCGAAGTGCTCTATGGCAAATAAGA 6955 || | || || | ||| | || ||| ||| || || |||| ||| || Sbjct 15219 TGTTAGTGGCAGCAGTGAAAACACCCGCAGTATGGCGGATGTTCTCTTCGGC------GA 15166 Query 6956 GAGGAAATAACCA-TGGCTGTTAAA----GGCTTAACTGCGCTGACGCTGGCAGACTGGG 7010 || |||||| | | | |||| | || || ||||| || | | || |||| Sbjct 15165 TAGCAAATAAGGTGTAGGGGATAAATTATGTCTAAA--GCGCTAACTTTAACTGATTGGG 15108 Query 7011 GTAAGCGCATCGACCCAAACGGGAAAGTCGATAAAATCATCGAACTTCTCGCACAAACAA 7070 |||||| ||||| ||| | || | ||| || | || || ||| || || | Sbjct 15107 CTAAGCGTCAAGACCCGAACAGTAAGCAAGCTAAGATTGTTGAGCTACTCAATCAGACCA 15048 Query 7071 ACCCGATCCTTCAGGACATGCTGATTGTTGAAGGTAACCTGCCGACCGGACACAAAACAA 7130 | | | || | |||||| | |||| || || ||| |||| || || ||| |||| Sbjct 15047 ATGAGGTTCTGGATGACATGGTATTTGTAGAGGGCAACTTGCCAACAGGCCACCGCACAA 14988 Query 7131 CTGTTCGTTCCGGTCTTCCGTCGGCAACCTGGCGTTTGCTGAACTACGGCGTGCAGCCAA 7190 | ||||| | ||||| || || || || |||||||| ||||||| || || ||||| | Sbjct 14987 CGGTTCGCACTGGTCTGCCATCAGCTACTTGGCGTTTATTGAACTATGGTGTTCAGCCTA 14928 Query 7191 GTAAATCGACTACCGTCCAGGTTACTGACGCTGTCGGCATGCTGGAAACCTACGCTGAAA 7250 ||||||| ||||||| ||| |||||||| || |||||| | ||| | ||| | || Sbjct 14927 GTAAATCAACTACCGCCCAAGTTACTGATGCGACAGGCATGTTAGAAGCTTACTCAGAGG 14868 Query 7251 TCGATAAATCTCTGGCTGATCTGAACGGCAATACTGCTGAATTCCGCCTGTCTGAAGACC 7310 | || ||| || |||||| | ||||| ||||| || || | || ||| | Sbjct 14867 TTGACAAAAAACTAGCTGATTTAAACGGTAATACAAACGAGTTTTTATTATCAGAATCAC 14808 Query 7311 GTGCATTTATCGAAGCGATGAATCAGCAGATGGCGCAGACGCTTTTTTATGGCGACTCCA 7370 | || || || | ||||||||| | ||||| |||| ||||| ||||| ||| | Sbjct 14807 AGCCTTTCATTGAGTCAATGAATCAGGAAATGGCAGAGACTCTTTTCTATGGTGACACGT 14748 Query 7371 GCGTAAATCCTCAGCAGTTTATGGGCCTTTCATCTCGCTATTCCAGTCTGTCTGCTG-GC 7429 ||| | ||||||| |||| || |||| |||||| | || || | || Sbjct 14747 CTGTACACCCTCAGCGATTTACTGGTTTTTCTGCTCGCTTTAATGATC-----GCAGTGC 14693 Query 7430 AACGCGCAG----AACATTATCGATGCAGGCGGTACCGGTACAGA--TAACACCTCTATC 7483 || | || | ||||||||||||||||| ||||| || | | ||||| ||| || Sbjct 14692 AAAGAGCGGTGCAAACATTATCGATGCAGGTGGTACAGGAAGTAACTTAACA--TCTGTC 14635 Query 7484 TGGCTGGTTGTTTGGGGTGAAAATACTGTTCACGGCATTTTCCCGAAAGGCCAGAAAGCT 7543 ||| | ||||| ||||| ||||||||| ||||| |||| |||||||| |||| | Sbjct 14634 TGGTTAGTTGTCTGGGGACAAAATACTGCACACGGTATTTATCCGAAAGGGTCTAAAGTT 14575 Query 7544 GGTTTGCAGATGGAAGATAAAGGGCAGCAGACACTGAAAGATGCCGCTGGTGGTCAGTAC 7603 || | || || | ||||| || || |||| |||| ||||| ||| | || Sbjct 14574 GGACTACATCAAGAGCACAAAGGCCAAGTTACTCTGACGGATGAAGCTGGCGGTAAATAT 14515 Query 7604 GAAGGCTACCGTACCCATTACAAGTGGGATAACGGTCTTTCCCTTCGTGACTGGCGTTAC 7663 ||||||||||| || |||||| | |||||||||||| | | |||| ||||||||||| Sbjct 14514 GAAGGCTACCGAACTCATTACCAATGGGATAACGGTTTAACTGTTCGCGACTGGCGTTAT 14455 Query 7664 GTTGTGCGCATTGCAAACATCGATGTCAGCAA 7695 || || || ||||||| || ||| |||| || Sbjct 14454 GTAGTACGTGTTGCAAATATTGATATCAGTAA 14423 Score = 120 bits (132), Expect = 8e-23 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29642 ACTGCCAGCACGCTGTTGCATGAAGCTGGCTATCCATCAGACTGGATTGAAAAGGCGCTG 29701 || |||||||| | |||||||| ||||||| | || |||||||| || ||| | Sbjct 34120 ACAGCCAGCACATTATTGCATGAGGCTGGCTTTAATTCTGACTGGATAGAGAAGTGTTTA 34061 Query 29702 GCGCATGAACAGAAGGGCGTGCGTGCGGTGTACAACAAAGCGGAGTACGCCAGGCAGCGC 29761 || || ||||| || ||||| ||||| || || |||||||| ||||| || ||||||| Sbjct 34060 GCCCACGAACAAAAAGGCGTACGTGCTGTTTATAACAAAGCAGAGTATGCAGAGCAGCGC 34001 Query 29762 GCCTACATGTTGCAGCAGTGGGCGAATATGGTTGATTGCTGGAT 29805 | | ||||| ||||||||||| |||||||| ||| | ||||| Sbjct 34000 CGCGATATGTTACAGCAGTGGGCTAATATGGTGGATGGTTGGAT 33957 Score = 86.0 bits (94), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 9/180 (5%) Strand=Plus/Minus Query 6149 CATTTAACGAAGGGCAGCGCAATCTGGCGCTGGAGTTGTTTCAGCGA-GTAATGACGCAC 6207 |||| || ||||| |||||| || | ||||||||| | ||| ||||||| Sbjct 15939 CATTCAATGAAGGTAGACGCAATAAGGGATTAGAGTTGTTTAA-CGATGTAATGAGTGTT 15881 Query 6208 TGCCCTGATCAGTATCTGAAGATGGCCGCAGAGGCCAGTGAACAGGAGTGAACA-----T 6262 |||||||||| ||| || ||||| | ||| |||| ||||||||| |||| | Sbjct 15880 TGCCCTGATCTCTATTTGGTCATGGCAGAAGAAGCCAAAGAACAGGAG--AACAATCAAT 15823 Query 6263 GAATTTATTTGAGCGTTTGCTGTATCGCCGCCTTTGCAATGAGCAATCAGTTGATGGTGG 6322 |||||||||| | || ||| ||| ||| |||||||| |||||| |||| ||||||| Sbjct 15822 GAATTTATTTCAACGCTTGGTGTTTCGTCGCCTTTGTAATGAGGTTTCAGAGCATGGTGG 15763 >seq2599 Length=15424 Score = 84.2 bits (92), Expect = 6e-12 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 36638 GCAAAGCAGCAGTGGATCGCCGCATTCGCCGAAGGTGGTATCCGTACCCGTGAGCAGGTC 36697 || || ||||| ||||||||||| ||||| || ||| | || ||| || || | Sbjct 7490 GCTAAACAGCAATGGATCGCCGCCTTCGCTGAGAACGGTGTTCGCACCAAGGAACAAATT 7549 Query 36698 TCTGCCGGAATGCGTCATGCCAGAGCCAGTGAATCACCGTTCTGGCCTTCACCTGG 36753 ||||| || |||||||| ||| | |||||||| || |||||||||||||| || || Sbjct 7550 TCTGCGGGTATGCGTCAGGCCCGTGCCAGTGAGTCCCCGTTCTGGCCTTCGCCGGG 7605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133505859311296