Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq2766 113 1e-20 >seq2766 Length=35022 Score = 113 bits (124), Expect = 1e-20 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 4584 ATCAACCTGCACATCCACTCCCCGGGCGGCGACGTCTTCGAGGGGACGGCGATCTATAAC 4643 |||||||| || || || || || || || || || || ||||||| || || || || Sbjct 17921 ATCAACCTTCATATTCATTCACCAGGAGGTGAGGTTTTTGAGGGGATCGCTATTTACAAT 17862 Query 4644 CTGCTGCGCAACCACCCGGCCAGCGTCGACGTGTACATCGATGGCTTGGCTGCCTCGATG 4703 | ||| || ||| |||| | | || || |||||||| || || || |||||| Sbjct 17861 CAGCTCAAAAATCACAATGCCAACATTACGGTTTATATCGATGGGTTAGCAGCTTCGATG 17802 Query 4704 GCCTCGGTCATCGCCATGGCCGGCGACACCATCTACATGCCCGAGAACGCCATGATGATG 4763 || || ||||| ||||||| || || || | ||||| | || |||||||||||| Sbjct 17801 GCGTCAGTCATTGCCATGGTAGGTGATGAAGTCAAAATGCCAAAAAATGCCATGATGATG 17742 Query 4764 GTGCATAAGCCCTGGGGCATCCAGGGCGGCGATGCGGACGACATGCGCCGCTATGCCGAA 4823 | ||||| || |||||| | | | || ||||| | || |||||| ||||| || Sbjct 17741 ATCCATAAACCTTGGGGCGTGTCGTGGGGTGATGCTAATGATATGCGCGATTATGCTGAT 17682 Query 4824 CTGCTCGACAAGGTCGA 4840 ||||| || || ||||| Sbjct 17681 CTGCTTGATAAAGTCGA 17665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138360094213152