Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq2629 80.6 8e-11 >seq2629 Length=15125 Score = 80.6 bits (88), Expect = 8e-11 Identities = 167/245 (68%), Gaps = 9/245 (4%) Strand=Plus/Minus Query 36387 TGAGGTTGTTGGCCTGATTGCTGGCGCGGTTGCTGACCGGAGTCATCACGTTTACCACCA 36446 ||||||||| | ||| |||||||| || ||| || || | |||| |||||| Sbjct 12642 TGAGGTTGTCGCGCTGGTTGCTGGC----TTCCTG-CCTGATTGCCGCCGTT-ACCACCT 12589 Query 36447 AGCATCTGCATCACGCCGCCCATCTGCGGAATGACAATCTCTGTGGTGTATCTGTCTATT 36506 ||||| ||||| ||||| || | | || | || || ||||||| |||| Sbjct 12588 AGCATTTGCATTGACCCGCCGATATTT---ACTACCACTTCCGTTGTGTATCGGTCTTGA 12532 Query 36507 CCGTTGCTGTCAGTCCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTGCGAACCT 36566 ||| | ||| ||||||||| || | || |||||||||||| ||||| ||| Sbjct 12531 CCGCTTTGGTCTTGCCATTTACGCGTTTGCAGAGAGCCTTCGATGTATACCTGGCTTCCT 12472 Query 36567 TTTCGAAGGTATTCTCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACGATGCCAC 36626 ||| || ||||| ||||||||||| || | || ||||| || || | |||||||| Sbjct 12471 TTTTTCAGATATTCGCCTGCAACTTCAGCTAACTTGCCGAAAATTACCACTCGATGCCAT 12412 Query 36627 TCTGT 36631 || || Sbjct 12411 TCGGT 12407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152078027650368