Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq303 100 5e-16 >seq303 Length=35491 Score = 100 bits (110), Expect = 5e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 135654 AGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGC 135713 ||| ||| | | |||||| |||| || | || || || ||| |||||||| | || Sbjct 13554 AGAGCTTCGTAAATGGGCAGATGCACTTCTAATTGCTCCATTAGATGCAAATACTATGGC 13613 Query 135714 AAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATAC 135773 ||||| || ||||| || || |||||||| || || || | || | |||||||| | Sbjct 13614 CAAAATGGCAAATGGGATTTGTGATAATTTGCTTACATCCCTCGTCCGTGCCTGGGACAA 13673 Query 135774 AAACAAACCACTCATTTTCTG-TCCTGCAATGAATACTCTTATGTGGGA 135821 ||||||||||| ||||| || ||| ||||||||||| ||||||||| Sbjct 13674 TAACAAACCACT-ATTTTTTGCTCCAGCAATGAATACATGTATGTGGGA 13721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923142527568120