Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4548 89.7 4e-13 >seq4548 Length=666 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||| ||||| ||||||||||| || | | || || Sbjct 437 ACCAAGTGAAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCG 378 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||||||||| ||||| ||||| | |||||||| || || | ||||| ||||| Sbjct 377 AGTTGTTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGTGGGATTCCCTCTTTGTCTTGG 318 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| |||||| | | | |||| | ||| ||||| | || || || || Sbjct 317 ATCTTTGACTTAACGTTATCAATGGTGTCAGAAGGCTCTACCTCAAGAGTGATAGTTTTT 258 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| |||||||||||||| Sbjct 257 CCAGTCAAGGTCTTAACAAAGATTTGCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395052555153763