Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq21 107 1e-18 >seq21 Length=323752 Score = 107 bits (118), Expect = 1e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || ||||| ||||||||||| | | || ||||| |||||||| |||||||||||||| Sbjct 30688 GCTTTTGCAGCTGTTGAAGGAATATTCTTCTCTGGTTCATTTGCTGCCATATTCTGGCTT 30629 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||||||| | ||||| ||||| | ||| || ||||||||| ||| || || Sbjct 30628 AAGAAACGTGGCTTGATGCCCGGGTTAACACATTCGAATGAGTTGATTTCCCGAGATGAG 30569 Query 22870 GGTCTACACTGTGACTTTGCTTGT 22893 || ||||| |||| ||||| ||| Sbjct 30568 GGGTTACACCGTGATTTTGCATGT 30545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356213181469309