Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 484 8e-132 seq64 235 7e-57 seq108 87.8 2e-12 >seq1 Length=1686976 Score = 484 bits (536), Expect = 8e-132 Identities = 1362/2062 (66%), Gaps = 73/2062 (4%) Strand=Plus/Plus Query 61870 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAA 61929 ||| ||||| || | || ||| |||||||| ||||| | ||| |||| || ||||| Sbjct 914631 TGCCGGTTTAGTTCTTAAATAATACATTCCTGTTTTCAAACCATTTTTCCAACCATAAAA 914690 Query 61930 ATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCT-ATATGGATATTCATAGATT 61985 |||||| ||| || | |||| | || ||| | | ||| | ||| | |||| Sbjct 914691 ATGCATTGAACTACATATTCC---ATAAGTTGG-TCTATTTACATGAAGATTAAGTGATT 914746 Query 61986 GACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAA 62045 || |||||| | |||| || | || ||||||| ||||| | |||||||||| Sbjct 914747 GAGATTGATCAACAAAGGGACCACGATCAATTGCCATTTCAATAATAGCTTTTTGTGGAA 914806 Query 62046 TTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT---TGTATTCTGAA 62102 ||||||||| ||||||||||| | | |||| | ||||| | | |||| |||| Sbjct 914807 TTTCCCAAACAGTTTTATAAAGTTCTCTGATATGTAATGGAATATCGCATATATTTTGAA 914866 Query 62103 TGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGG 62162 | || ||| || | | || || ||| || || || ||||| | | | || Sbjct 914867 TAGACCCATTATTTTCAATTATTTGATTAAGAATTTCCTCGTTCCAAA---TACCAAGGG 914923 Query 62163 T---TAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 62219 | |||| ||| |||||||| | ||| || | |||||| || ||||| || || | | Sbjct 914924 TAATTAAATCTCGTAGGAGATGAGTATTTACAATTTGAAAATCACCAGATAAAACCCGTC 914983 Query 62220 GAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAG 62279 || || | ||| || || ||||| | ||| |||||| | || | ||| |||| | Sbjct 914984 TTGTATATAAATTTGATGTGTATGGTTCAATAGATTCATTACTGCCAAGAATCTGAGATG 915043 Query 62280 TTGATGCAGTCGGCAT---AGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGA 62336 | || ||||| ||||| || | | | |||| || || | || || || | | Sbjct 915044 TAGAAGCAGTGGGCATTAAAGATACTAACAATGAATTA---CGAATGCCAAATTTAGAAA 915100 Query 62337 TTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNN 62396 |||| || || | | || ||||||||| | || || ||| Sbjct 915101 TTTTCTCCTTCAAACTTTTCCAATTCCATAAATTGCTTGGAGTAACACCCCACATGTCAT 915160 Query 62397 NTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCT 62456 || ||||| || ||| | ||||| || |||| || || | ||| | ||| Sbjct 915161 ACTGAAGAATTCCTTTAGATACAGGTGATCCATCAAATGTTTCATAGGATCCATGAATCT 915220 Query 62457 CAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTAT 62516 |||| |||||| ||||| | |||||| | |||||| ||||| ||||| ||||||| Sbjct 915221 TTGCTAATTCACAGGAAGCCTCAAGTGCACCATGATAAATAGTTTCAAAGATTTTCTTAT 915280 Query 62517 TTAGATCTTGCGCTTCCAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 62575 | |||||| ||||| | | | | ||||||||| || | ||| | ||| || ||||| Sbjct 915281 TGAGATCTCTAGCTTCTGGTGATGT-AAATGGATATTTCATGAGTAAAAATGCATCTGCA 915339 Query 62576 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62635 | |||||| || ||||| || ||||| | |||| | |||| || | || || Sbjct 915340 AGTCCTTGTACTCCAATTCCAATAGGACGATGTTTAGTATTTGATAAACGTGCCTCCTCC 915399 Query 62636 ATAGGATAATAATTAATATCTATAATTTTATTGAGATT-TCTGACAATTACTTTGACCAC 62694 | ||||||| ||||||||| |||| || || | ||| | || ||| |||| ||| Sbjct 915400 AGTGGATAATGATTAATATCAATAACCTTGTTCAAATTCTTTGTCAAAATTTTTG-CCAT 915458 Query 62695 ATCCTTCAG---TTTGAGAAAATCAAATCGCCCAT----CTATT--------ACAAACAT 62739 | | || ||| ||||||||| | | || || ||||| | Sbjct 915459 GTTATGAAGACGTTT---AAAATCAAAAACACGTTTTTTCTCTTTAATCACGACAAAATT 915515 Query 62740 GTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTAT 62799 || | ||||| ||| ||| ||||||||| || || ||||||| | | |||| | Sbjct 915516 ATTAAGTGCAATAGACCCCAAATTACAAACAGCAACTTCATTAGGGGAAGAAAATTGAAC 915575 Query 62800 TATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 62859 || |||| |||||||| ||| || || ||||||||||||||||||||||| || Sbjct 915576 AATTTCAGCACAAAGATTTGAACATTTTATTGTTCCTAAATTTTGTTGATTACTTTTACG 915635 Query 62860 GTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 62919 |||||| |||||| ||||| || ||||| |||| || || ||||||||||| ||| Sbjct 915636 GTTACAATGATCCTTGTAAAGCATATATGGAATACCCGTCTCTATCTGAGATTCACAAAT 915695 Query 62920 CGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC--TTTTCTCTTTCGTAT 62977 | | ||| | || || |||| | | || ||| | ||||| |||| ||| Sbjct 915696 CTTCTGCCAAATATATCTGGCTTTTACTT--GTTTCCTATAACGATTTTCATTTTCATAT 915753 Query 62978 AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCC 63037 || || | | || || || || || || || || || || |||||||||| Sbjct 915754 TGTACGTAAAGTTTATCAAAATCATCACCAAAACAATCATCAAGACCCGGACATTCATTA 915813 Query 63038 GGACACATCAACGACCACTCTCCGTCATCCTTCA-CTCGTTTCATAAAGAGATCAGGAAT 63096 |||||||| |||||||| | | || | |||| | ||||||||||| | ||| |||| Sbjct 915814 GGACACATTAACGACCAATGTGAATCG-CTTTCAACACGTTTCATAAATAAATCTGGAAC 915872 Query 63097 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 |||||| | ||||| ||| | | ||| | ||| || |||||| |||||||| | Sbjct 915873 CCAAAGTCCGTAAAATAAATCGCGTGCTCTTTCTTCTTCTGGTCCTGTGTTCTTTTTTAA 915932 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || || || |||||||| | |||||| |||||||| ||||| || | | ||||| Sbjct 915933 CTCAAGAAATTGGATAATATCTGCATGCCATGGTTCCAAATATATAGCAAATGCACCAGG 915992 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 | ||| || || || ||||| | || | | | || |||| ||||| | |||||||| Sbjct 915993 TCTTTTATTGCCACCTTGATCAACATAACGAACAGTACTATTGTAAACACGTAACATTGG 916052 Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 || | |||||| || | ||||| || || || ||| | ||| ||||||| || | Sbjct 916053 AACCAAACCATTTGAAGATCCATTAGTTCCAGAAATAAATGATCCTGTGGCACGGATTGT 916112 Query 63337 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63396 ||| || || |||| ||||| ||| | || || || | || ||||| ||||| || Sbjct 916113 ACTGATACTTAATCCTACCCCCCCAGCCGTCTTTGAAATAACAGCACATCGCTTTAAAGT 916172 Query 63397 ATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACAGCTAGACATTT 63455 |||||||| || || ||| |||||| |||| ||||| | ||| ||| | | | | Sbjct 916173 GTCATAGATTCCTTCAATAGAATCATCACTCATCGTTAA-CAAAAAGCAGGAACAAAGCT 916231 Query 63456 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAG 63515 | | || || || ||||||||||| || ||||| | || |||| | || | Sbjct 916232 GAGGTCGTAGGGTACCAGCATTAAATAACGTTGGAGATCCATGGATAAAAAGTCGTTTTG 916291 Query 63516 AAAGTAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63574 | | || || |||| |||| |||||| || | ||||| |||||| || | || Sbjct 916292 ACA-TATATCTGTATGTCTGAATAGCAGATGCAATATCTTCACCATGAATACCAATGGCA 916350 Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634 |||||||| | ||| || |||||||||||||| || || || ||||||||||| || || Sbjct 916351 ACACGCATAAGCATATGTTGAGGTCTTTCAACAATTTTATTATTTATTTTCAATAAATAT 916410 Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA---TGAAAAGTCTCGTTCGTAAA-- 63689 ||| ||| || || ||||| ||||| || |||| || ||| |||| || |||| Sbjct 916411 GATCGTTCTAATGTCTTAAATCCAAAGTA--TGTAAAGTGGAAA-TCTCTTT--TAAATC 916465 Query 63690 TAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTG-AA 63748 ||||||| || | | ||| | | || ||| || | || | ||| | |||| Sbjct 916466 TAATAACTGAATCCAATTTCTTCGAAT-TTTTTTGAATAATTTCATTCACTTCCTTGCTT 916524 Query 63749 ATAATAGGAAAATGTT-TCCCAT--TTTTAGGATTGACATAGTTGAATAAATCCTCCATC 63805 || | ||| |||||| |||| | | ||| | ||| | || | ||||| ||||| Sbjct 916525 ATCAATGGACAATGTTCTCCCGTCATATTATGTTTG---TGATTATACAAATCATCCATT 916581 Query 63806 ACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCT 63865 || | | |||| ||| || || | ||| |||| | | || || || || | ||| ||| Sbjct 916582 ACCTTAGAAAATTTTTTCTTAGTCTGTTTATGTAAAATCGAAACAGCAATACGAGCAGCT 916641 Query 63866 AGAATGGCATAATCCGGATGTT 63887 | | | |||| ||||||| Sbjct 916642 AAGACTCCGAAATCAGGATGTT 916663 >seq64 Length=153875 Score = 235 bits (260), Expect = 7e-57 Identities = 436/629 (69%), Gaps = 22/629 (3%) Strand=Plus/Minus Query 62422 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 62481 ||||||| |||| || || || ||||| || ||||| | |||||| ||||| || Sbjct 123184 CGATCCTTCATAAGTTTCATAAGGTCCATCACGTTCAGCCAATTCACATGAAGCCTCCAA 123125 Query 62482 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATC 62541 ||||| | ||||| |||||||| |||| ||||| || |||| |||| ||| | Sbjct 123124 GGCACCATGGTAAATTGTTTCGAAAATCTGTTTATTAAGTTCTTTAGCTTG-AGGTGAGG 123066 Query 62542 -AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 62600 ||||||||| | | ||| || || || ||||| || ||||||||||||||||| || | Sbjct 123065 TAAATGGATATCTCATGAGCATGAATGCATCTGCCAAACCTTGAACACCAATACCTATTG 123006 Query 62601 GTCTATGTCTCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATA 62659 | | |||||| ||||||| ||| | ||||||||||| || |||||||| | ||| ||| Sbjct 123005 GACGGTGTCTCATATTAGA-ATTCCTAGCTTCTGGAACTGGGTAATAATTCACATCGATA 122947 Query 62660 ATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAG-AAAAT---- 62714 || ||||| | ||| ||| | | ||| | |||| | || ||||| ||||| Sbjct 122946 ATCTTATTTAAATTCCTGGTCAAAATTTTAGCAACATAGTGGAG-TTGAGTAAAATTGAA 122888 Query 62715 --CAAATCGCCCA---TCTAT---TACAAACATGTTCAATGCAACAGATGCCAGATTACA 62766 || | |||| ||||| ||||| | || | |||| ||| | |||||||| Sbjct 122887 AACAGGTTTCCCATTTTCTATATCAACAAATCTATTGAGAGCAATAGACCCTAGATTACA 122828 Query 62767 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 || || || |||| | ||||| | ||||| || || |||||| |||||| Sbjct 122827 TACAGCAACTTCATCTGGTGAACAATATTCAACGATCTCGGTACAGAGATTAGAACACTT 122768 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 ||| ||||| | ||||||||||||||| || ||||| ||| ||||||| ||| | Sbjct 122767 GATAGTTCCAAGATTTTGTTGATTACTTTTCCGATTACAATGATCTTTATAAACCATGTA 122708 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 62946 || || ||||||||||||||| ||| |||| || ||| | |||| || || || Sbjct 122707 AGGTGTGCCAGTTTCAATCTGACTTTCACAAATCTTTTGCCAAATAACTCTTGCTTTAAT 122648 Query 62947 TATAGATTTGTATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCT 63004 | | ||| | | | |||||| | || ||| | || ||| ||||| || || Sbjct 122647 --TTGCTTTCTGTAGCGTTTCTCCTCCTCATATTTGATGTATAATTTCTCGAATTCATCA 122590 Query 63005 CCCCAAACATTGTCCAGTCCAGGACATTC 63033 |||||| || || || ||||||||||| Sbjct 122589 CCCCAACAATCCTCAAGCCCAGGACATTC 122561 Score = 205 bits (226), Expect = 1e-47 Identities = 487/729 (67%), Gaps = 8/729 (1%) Strand=Plus/Minus Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307 || || |||||| |||| |||||||||||||| | ||||| ||||| ||||| ||||| Sbjct 122538 GCTGTATTATTAAAAACCCTCAACATTGGAATCAATCCATTTGATGTCCCATTTGTCCCA 122479 Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63367 ||| | ||| | || | |||| || || || || || ||||| | Sbjct 122478 CCAATAAATGAACCATTAGCTCTAATACAGTGAACATTTAAGCCAATACCACCTGCAGAT 122419 Query 63368 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 63427 || ||||| || |||||| | || | || || || || || ||||| |||| | | Sbjct 122418 TTCGAGATCAAAGCGCATTGCTTAAGTGTGTCGTAAATCCCTTCTATTGAATCACCAGCC 122359 Query 63428 AT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 63486 || ||||| ||||| || |||| || |||| ||||||||||| || ||||| || Sbjct 122358 ATTGTTAATAAGAAA-CATGAGGACAACTGAGGACGCCTAGTTCCCGCGTTGAATAAAGT 122300 Query 63487 AGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 63546 |||||||| ||||| ||||| || | ||| | || ||| |||||||| | || | Sbjct 122299 TGGAGAAGCATGAGTGAACCACTTCTGAGACATATAATCGTAAGTCTCAATGACAGAATT 122240 Query 63547 TATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63606 ||||| | ||||| || || || |||||||| || | || |||||||| || | Sbjct 122239 AATATCTTCTCCGTGAATCCCAACAGCAACACGCATCAATAGATGTTGAGGTCTCTCGGC 122180 Query 63607 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63666 || || ||||| || || | || || ||||| || || ||||| ||||| Sbjct 122179 AATTTTCCCATTTATCTTTAAAAGATAAGAACGCTCCAACGTCTTGAAACCGAAATAAGA 122120 Query 63667 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC 63726 | ||| || | | |||| ||| | ||||| |||||||| | || | Sbjct 122119 AAAGTCAAAATCCCTGTTATAAACAATTGCAGAGTTCAGTTTATCAGCGTTCTTCAGGAT 122060 Query 63727 TACATCCATGGTAATACTTGAAATA--ATAGGAAAATGTTTCCCATTTTTAGGATTGACA 63784 | ||| || | ||| | || || || | ||| || | || || | Sbjct 122059 GATATCGTGTGT--TTCTTTACTTATCATTGGCATATGAACTCCTGTAATATTATGGCGG 122002 Query 63785 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTT 63844 ||||| ||||||| ||||| |||||| || || ||||||| ||| || | ||| Sbjct 122001 TAGTTATATAAATCATCCATTACTTCAGAGAAACTCTTCTTTGTTTGTTTATGCATGTTT 121942 Query 63845 GATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG-GC 63903 || | ||| ||||| || |||| || |||||||| ||||| ||| || || || || Sbjct 121941 GAAATGGCGATTCTTGCTGCTAATATAGCATAATCAGGATGAATTGTTGT-CATGTTAGC 121883 Query 63904 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTG 63963 ||| | ||| ||||| ||| | || || || ||||||| |||||||||||| | ||| || Sbjct 121882 TGCAACTTCTGCTGCAAGATTATCTAACTCAACCGTTGATACACCATTATACAGTCCCTG 121823 Query 63964 GATAACCTT 63972 |||||| || Sbjct 121822 GATAACTTT 121814 Score = 105 bits (116), Expect = 8e-18 Identities = 235/344 (68%), Gaps = 9/344 (3%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||| || | || |||||||| |||||||||| || | |||| |||| |||| Sbjct 123684 GCAGGTTTAGTTCTTAAGTAGTACATCCCCGTTTTTAATCCACGTTTCCAACCGTGAAAA 123625 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCT-GCTATATGGATATTCATAGATTGACT 61989 |||||| | | | ||| || ||| || | ||| | || | ||||| Sbjct 123624 TGCATAGAACTACAAATTGCATATGATGG-TCTAGCCACATGAAGGTTAAGGGATTGTGA 123566 Query 61990 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGA-ATTT 62048 |||||| ||||| || || | || |||||||| | ||||| ||||| ||| |||| Sbjct 123565 TTGATCAATGAAAGCACCACGATCAGCAGCCATCTCAATAATA-TCTTTCTGGGAGATTT 123507 Query 62049 CCCAAATAGTTTTATAAA-CTCGCTTAATATCTTCTGGAA---GGTTTGTATTCTGAATG 62104 |||| | ||||||||||| ||| |||||||| | || | ||| |||| || || Sbjct 123506 CCCATACAGTTTTATAAAGCTC-TTTAATATCATTGGGTATTTCTTTTATATTTTGGATA 123448 Query 62105 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62164 |||||| ||| || || || |||| | | || || ||||||| || || || Sbjct 123447 GATCCATTATCAGCTATTATTTCATTCATTAGTTCTTCGGTCCATAAGTTAAGTTCAATT 123388 Query 62165 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGA 62208 ||| || |||| ||||| ||||| || | ||| || || ||||| Sbjct 123387 AAATCTTTAAGAAGATGTGGATTTACAATTTGGAAATCACCAGA 123344 >seq108 Length=97238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 27514 ACCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAAT 27573 ||| | ||| ||||| | ||| |||||| |||||||||| || || || |||| || || Sbjct 87570 ACCCATTTCTTTGACTTCAGTCAATGATTTCCAATCCATGTTTGCACTACCTATGTAGAT 87629 Query 27574 ATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCT---CCTAGGATATTTGT 27630 |||| | | ||| ||||||||||| ||||| | ||||||| || |||| | ||| Sbjct 87630 ATGTTTTTGGTCAACAATCCAAAATTTGGTATGTAAAACTCCTGAACCAAGGAGGTGTGT 87689 Query 27631 AATATCTATATATCTCACTTCAAC 27654 || | || ||||||||| ||| Sbjct 87690 AAAGTTTAGTGATCTCACTTTAAC 87713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633594750358800