Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 618 5e-172 seq21 264 1e-65 seq64 203 4e-47 >seq1 Length=1686976 Score = 618 bits (684), Expect = 5e-172 Identities = 1239/1845 (67%), Gaps = 27/1845 (1%) Strand=Plus/Plus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || ||| |||| || | ||||| || | ||| |||| |||||||||||| || Sbjct 914601 TTTATCAACACTAAATTTCACAGGATTTGCTGCCGGTTTAGTTCTTAAATAATACATTCC 914660 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || || ||||| |||| ||||| |||||||| | | || | |||| | || Sbjct 914661 TGTTTTCAAACCATTTTTCCAACCATAAAAATGCATTGAACTACATATTCCATAAGTTGG 914720 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 | | ||||| |||||| |||||| ||||||| ||| | ||| | |||| ||| Sbjct 914721 TCTATTTACATGAAGATTAAGTGATTGAGATTGATCAACAAAGGGACCACGATCAATTGC 914780 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| || | |||| | ||||||| || ||||| || |||||||||| || | | || | Sbjct 914781 CATTTCAATAATAGCTTTTTGTGGAATTTCCCAAACAGTTTTATAAAGTTCTCTGATATG 914840 Query 47213 TTCTGGGAGAT----TAGTATTTTGAATAGATCCTCCgttttctataattttgtttttta 47268 | ||| | || || ||||||||||||| || ||||| || |||| || | Sbjct 914841 TAATGGAATATCGCATA-TATTTTGAATAGACCCATTATTTTCAATTATTTGATTAAGAA 914899 Query 47269 attcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTT 47328 ||| | ||||| | | |||| | || ||||||| ||| ||||||| Sbjct 914900 TTTCCTCGTTCCAAATACCAAGGGTAATTAAATCTCGTAGGAGATGAGTATTTACAATTT 914959 Query 47329 GAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATT 47388 |||| || ||||||| || | | |||||| ||| ||| |||||||| ||||||| Sbjct 914960 GAAAATCACCAGATAAAACCCGTCTTGTATATAAATTTGATGTGTATGGTTCAATAGATT 915019 Query 47389 CATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTAT 47448 ||||| | |||| ||| |||| || || || || ||||| | | ||||| || || Sbjct 915020 CATTACTGCCAAGAATCTGAGATGTAGAAGCAGTGGGCATTAAAGATACTAACAATGAAT 915079 Query 47449 TTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATG 47508 | | | ||| |||| || | |||||||| ||| | || || Sbjct 915080 TACGAATGCCAAATTTAGAAATTTTCTCCTTCAAACTTTTCCAATTCCATAAATTGCTTG 915139 Query 47509 GAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATG 47568 || |||| ||| | ||||| ||||||||||||||| || || || |||| | ||| Sbjct 915140 GAGTAACACCCCACATGTCATACTGAAGAATTCCTTTAGATACAGGTGATCCATCAAATG 915199 Query 47569 TTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATA 47628 ||| ||| | || | | || || | |||||| || || | ||||| || ||| | Sbjct 915200 TTTCATAGGATCCATGAATCTTTGCTAATTCACAGGAAGCCTCAAGTGCACCATGATAAA 915259 Query 47629 TTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNNNN 47688 | |||||||| ||||| | || |||| || ||||||| |||| ||| ||||| Sbjct 915260 TAGTTTCAAAGATTTTCTTATTGAGATCTCTAGCTTCTGGTGATGTAAATGGATATTTCA 915319 Query 47689 NNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTAT 47748 |||| |||||| | |||||| || ||||| ||||| || | ||| | ||| Sbjct 915320 TGAGTAAAAATGCATCTGCAAGTCCTTGTACTCCAATTCCAATAGGACGATGTTTAGTAT 915379 Query 47749 TAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNN 47808 | || || || || | |||||| | || ||||| |||| || || | | Sbjct 915380 TTGATAAACGTGCCTCCTCCAGTGGATAATGATTAATATCAATAACCTTGTTCAAATTCT 915439 Query 47809 NNNNNNNNNNNNNNACAATTTCTCTTAATTTATT-AAAATCAAAC------TTGTTATTT 47861 | || | | | || || ||||||||| || || | | Sbjct 915440 TTGTCAAAATTTTTGCCATGT-TATGAAGACGTTTAAAATCAAAAACACGTTTTTTCTCT 915498 Query 47862 ATAA------CAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTT 47915 ||| |||| |||||||||| ||||| | | |||||| ||||| || ||||| Sbjct 915499 TTAATCACGACAAAATTATTAAGTGCAATAGACCCCAAATTACAAACAGCAACTTCATTA 915558 Query 47916 GGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTT 47975 || || | |||| | ||||||||||| ||||| |||||| || || || |||||| Sbjct 915559 GGGGAAGAAAATTGAACAATTTCAGCACAAAGATTTGAACATTTTATTGTTCCTAAATTT 915618 Query 47976 TGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCT 48035 || |||||| | |||||| ||||||||||||||| | || | || || ||| Sbjct 915619 TGTTGATTACTTTTACGGTTACAATGATCCTTGTAAAGCATATATGGAATACCCGTCTCT 915678 Query 48036 ATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTA--TAACAGCTCTAGCTT 48093 |||||||||||| || | ||||| | || || |||| | || || | Sbjct 915679 ATCTGAGATTCACAAATCTTCTGCCAAATATATCTGGCTTTTACTTGTTTCCTATAACG- 915737 Query 48094 TATTATCATGTTCGTATTTAGTATATAAC--TTCTCAAATTCATCCCCATACACATTATC 48151 ||| |||| ||| |||| ||| ||| || ||||| ||||| ||| | || ||| Sbjct 915738 -ATTTTCATTTTCATATT--GTACGTAAAGTTTATCAAAATCATCACCAAAACAATCATC 915794 Query 48152 TAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGT 48211 | || |||||||||||||||||||| || ||||||| ||| ||| || | | Sbjct 915795 AAGACCCGGACATTCATTAGGACACATTAACGACCAATGTGAATCGCTTTCAACACGTTT 915854 Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATT 48271 |||||||| |||||| | |||||| | ||||||||| | | |||| |||||| Sbjct 915855 CATAAATAAATCTGGAACCCAAAGTCCGTAAAATAAATCGCGTGCTCTTTCTTCTTCTGG 915914 Query 48272 GCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331 || | ||| |||| | |||||||| | || ||||| |||||||||||||| ||||| Sbjct 915915 TCCTGTGTTCTTTTTTAACTCAAGAAATTGGATAATATCTGCATGCCATGGTTCCAAATA 915974 Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391 ||| || | | |||| |||| |||||| || |||||||| | ||| | ||||| | || Sbjct 915975 TATAGCAAATGCACCAGGTCTTTTATTGCCACCTTGATCAACATAACGAACAGTACTATT 916034 Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451 ||||| | ||||||||| || | ||||||||| ||||| ||||| |||||| | Sbjct 916035 GTAAACACGTAACATTGGAACCAAACCATTTGAAGATCCATTAGTTCCAGAAATAAATGA 916094 Query 48452 TCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAG 48511 ||| | || | || |||| || | |||| || || ||| | || || || | Sbjct 916095 TCCTGTGGCACGGATTGTACTGATACTTAATCCTACCCCCCCAGCCGTCTTTGAAATAAC 916154 Query 48512 AGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAG 48571 |||||| || || | || ||||| |||||||| ||| |||||| |||| |||| | Sbjct 916155 AGCACATCGCTTTAAAGTGTCATAGATTCCTTCAATAGAATCATCACTCATCGTTAACAA 916214 Query 48572 AAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATG 48631 ||| || | | | || || | || || | ||||||||| ||||||||| |||| Sbjct 916215 AAAGCAGGAACAAAGCTGAGGTCGTAGGGTACCAGCATTAAATAACGTTGGAGATCCATG 916274 Query 48632 AATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTG 48691 ||||| | | ||| | || | ||||| | |||| |||| | ||||| Sbjct 916275 GATAAAAAGTCGTTTTGACATATATCTGTATGTCTGAATAGCAGATGCAATATCTTCACC 916334 Query 48692 ATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATT 48751 ||| ||||| || | |||||||| | ||||| ||||||||||||||||||||| ||||| Sbjct 916335 ATGAATACCAATGGCAACACGCATAAGCATATGTTGAGGTCTTTCAACAATTTTATTATT 916394 Query 48752 TATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 ||||||||| | ||||||| ||| ||||| ||||| ||||| || Sbjct 916395 TATTTTCAATAAATATGATCGTTCTAATGTCTTAAATCCAAAGTA 916439 >seq21 Length=323752 Score = 264 bits (292), Expect = 1e-65 Identities = 510/747 (68%), Gaps = 18/747 (2%) Strand=Plus/Plus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 |||||| || | ||| || ||||| | ||| | || ||||||||||| ||||| || || Sbjct 30242 CATTACACCGAATTTCTGGTATTCAGATACTTTCTTCTCAAAGAAATTGGTTTTGCCTTC 30301 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776 | ||| | | |||||||||||||||| || || |||||| | |||| || Sbjct 30302 AATTGAGAGATTAACCATAAAATCAAATGGGTTCTTAGTATTATAAAGCTTTT-GACAAT 30360 Query 18777 TAA-TTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAAT 18835 ||| ||||| | ||| ||| || ||| | | ||||| ||| | | | ||| Sbjct 30361 TAAGTTCTACCAATAGATGATCGGCAACATACTCGATATAATCACACATTAAACCTGAAT 30420 Query 18836 TCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTG 18895 ||||||| || | | |||||| || ||||| |||||| |||| | ||| ||| | || | Sbjct 30421 TCATTCCGATCATATCAACAGGAAGAGCATCAGTAAGATATTCCTTTTCAATACTAACGG 30480 Query 18896 CCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTA----TAGAAGATGTTTA 18951 | ||| || || | | | || ||| | || || | | ||| | | Sbjct 30481 CATCTCTAATTAT---TTCCTTTATACGTTCTTCAGATGGCTTGTTCTCCAAG-TAACTG 30536 Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| | |||||||||||||| |||| ||||| |||| ||||| ||||| ||| Sbjct 30537 TACATAAGACATGCAAAATCACGGTGTAACCCCTCATCTCGGGAAATCAACTCATTCGAA 30596 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 |||||| || ||||||| || | ||| || | ||||||||| | ||||||||| ||| Sbjct 30597 TGTGTTAACCCGGGCATCAAGCCACGTTTCTTAAGCCAGAATATGGCAGCAAATGAACCA 30656 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 || |||||||| ||||| || ||||||||||||| || | ||||||| || |||| | Sbjct 30657 GAGAAGAATATTCCTTCAACAGCTGCAAAAGCAATTACACGTTCTCCAAAAGTAGCGTTT 30716 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 || | ||||||| | || ||||||||||| |||||| | | | || | | || Sbjct 30717 TTGTCGGCAATCCATCTTAGAGCCCAATCAGCTTTCTTTCTGATGAAAGGAAATTCATCC 30776 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 | || || || || | | | |||||| ||| || ||| | | ||||||| Sbjct 30777 AAAGCGTTGAAGAGTTTATTTCTCTCATCCTGATC----ACGAATGTAGGTTTCAATAAG 30832 Query 19252 CT----GTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCT 19307 | |||||| || |||||||||||| || || || ||||| || || ||| | | Sbjct 30833 TTTCGAGTACATCTCACTATGAATATTTTCCATGGCAATTTGAAAACCATAGAAAAAGCG 30892 Query 19308 TGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367 ||| || | | ||| ||||| | |||||||||| || ||||| || ||||| || || Sbjct 30893 TGCCTCGGGGACCTGGACTTCCTTTGAAAATCTTTCAACTAAATTCTCGTTAACGATACC 30952 Query 19368 ATCACTAGCTGCAAAAAATGCTAATAC 19394 ||| || ||||| || ||||| || Sbjct 30953 ATCCGATGCAGCAAAGAAGGCTAACAC 30979 >seq64 Length=153875 Score = 203 bits (224), Expect = 4e-47 Identities = 449/675 (67%), Gaps = 20/675 (3%) Strand=Plus/Minus Query 47514 ACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTA 47573 |||||||| | ||| |||||||||||||| ||| || || || || | ||| |||| | Sbjct 123225 ACATTCCACATATCGTATTGAAGAATTCCCTTAGATACTGGCGATCCTTCATAAGTTTCA 123166 Query 47574 TAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTT 47633 ||||| || | ||| ||| | |||||| || ||||| |||| || || |||||| Sbjct 123165 TAAGGTCCATCACGTTCAGCCAATTCACATGAAGCCTCCAAGGCACCATGGTAAATTGTT 123106 Query 47634 TCAAATATTTTTATGTTTAGATTCCTT-GCTTCTGATGATTCAAAAGGATANNNNNNNNN 47692 || || || | | | || || ||| || |||| | ||| ||| ||||| Sbjct 123105 TCGAAAATCTGTTTATTAAG-TTCTTTAGCTTGAGGTGAGGTAAATGGATATCTCATGAG 123047 Query 47693 NNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGA 47752 |||| ||||||||| ||||||||||||||||| ||||| | || | ||||||| Sbjct 123046 CATGAATGCATCTGCCAAACCTTGAACACCAATACCTATTGGACGGTGTCTCATATTAGA 122987 Query 47753 AAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNN 47812 | | ||||||||| | ||| || | || | ||| ||||| ||||||| | Sbjct 122986 ATTCCTAGCTTCTGGAACTGGGTAATAATTCACATCGATAATCTTATTTAAATTCCTGGT 122927 Query 47813 NNNNNNNNNNACAATTTCTCTTAATTTATTAAAAT--CAAACTTGTT----ATT---TAT 47863 ||| | | || | |||||| |||| ||| ||| ||| Sbjct 122926 CAAAATTTTAGCAACATAGTGGAGTTGAGTAAAATTGAAAACAGGTTTCCCATTTTCTAT 122867 Query 47864 ---AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATT 47920 |||||| ||||| || || ||||| |||||||||||||||| || |||| ||| Sbjct 122866 ATCAACAAATCTATTGAGAGCAATAGACCCTAGATTACATACAGCAACTTCATCTGGTGA 122807 Query 47921 AGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATG 47980 | ||||| | || || | ||| |||||| ||| |||||||| || | |||||| || Sbjct 122806 ACAATATTCAACGATCTCGGTACAGAGATTAGAACACTTGATAGTTCCAAGATTTTGTTG 122747 Query 47981 ATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTG 48040 |||| | ||||| || || |||| ||| ||||||| |||||||| ||||| Sbjct 122746 ATTACTTTTCCGATTACAATGATCTTTATAAACCATGTAAGGTGTGCCAGTTTCAATCTG 122687 Query 48041 AGATTCAATGATAGATTTCCAAACAGTCCTAGCCTT--TATAACAGCTCTAGCTTTATTA 48098 | |||| || || ||||| | || || || | | || |||| | || Sbjct 122686 ACTTTCACAAATCTTTTGCCAAATAACTCTTGCTTTAATTTGCTTTCTGTAGCGT--TTC 122629 Query 48099 TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATC-CCCATACACATTATCTAACCC 48157 || | || ||||| | ||||| ||||| |||||||| ||| ||| || || | ||| Sbjct 122628 TCCTCCTCATATTTGATGTATAATTTCTCGAATTCATCACCCCAACA-ATCCTCAAGCCC 122570 Query 48158 AGGACATTCATTAGG 48172 ||||||||| | ||| Sbjct 122569 AGGACATTCGTGAGG 122555 Score = 194 bits (214), Expect = 2e-44 Identities = 486/732 (66%), Gaps = 41/732 (6%) Strand=Plus/Minus Query 48381 GCAGTATTGTTATAAACTCTTAACATTGGGA-CAATACCATTTGATATACCATTGGTTCC 48439 || ||||| ||| |||| || |||||||| | |||| ||||||||| | ||||| || || Sbjct 122538 GCTGTATTATTAAAAACCCTCAACATTGGAATCAAT-CCATTTGATGTCCCATTTGTCCC 122480 Query 48440 CGAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAATACCTATACCACCTGCC 48497 |||| | ||| ||||||| ||| || || || || ||||||||||| Sbjct 122479 ACCAATAAATGAACCATTAGCTCTAATACAGTGAACATTTAAG--CCAATACCACCTGCA 122422 Query 48498 ATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCT 48557 ||| || || | ||| || | ||||| || || ||||| |||||||| |||| | Sbjct 122421 GATTTCGAGATCAAAGCGCATTGCTTAAGTGTGTCGTAAATCCCTTCTATTGAATCACCA 122362 Query 48558 ATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAAT 48617 ||| |||||| ||||| |||| || ||| | | |||||| | || ||||| Sbjct 122361 GCCATTGTTAATAAGAAACATGAGGACAACTGAGGACGCCTAGTTCCCGCGTTGAATAAA 122302 Query 48618 GTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAA 48677 |||||||| |||||| | ||||| |||| || | | | || || ||||| |||||| Sbjct 122301 GTTGGAGAAGCATGAGTGAACCACTTCTGAGACATATAATCGTAAGTCTCAATGACAGAA 122242 Query 48678 TCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCA 48737 | ||||| | || || || | || |||||||| || | || ||||||||| || Sbjct 122241 TTAATATCTTCTCCGTGAATCCCAACAGCAACACGCATCAATAGATGTTGAGGTCTCTCG 122182 Query 48738 ACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAG 48797 ||||||| |||||| || |||||||| || ||||| || || ||||| ||||| Sbjct 122181 GCAATTTTCCCATTTATCTTTAAAAGATAAGAACGCTCCAACGTCTTGAAACCGAAATAA 122122 Query 48798 TTGTATGAAAAGTCGTTATCATTAATAATTGATGAATTTA-----------TTCT----- 48841 | ||| || | | || || ||||| || || | |||| Sbjct 122121 GAAAAGTCAAAATCCCTGTTATAAACAATTGCAGAGTTCAGTTTATCAGCGTTCTTCAGG 122062 Query 48842 ----TTCCTTATGTTTATATACTACATCCATTACATTT-------TTTGATATAATTG-A 48889 | | | ||||| | |||| ||| | ||| | | | |||| || | Sbjct 122061 ATGATATCGTGTGTTTCTTTACT-TATCATTGGCATATGAACTCCTGTAATATTATGGCG 122003 Query 48890 TTCCTTGTAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATT 48949 | || || | ||| || | || ||| || | || ||||||| |||||| | || Sbjct 122002 GTAGTTATATAAATCATCCATTACTTCAGAGAAACTCTTCTTTGTTTGTTTATGCATGTT 121943 Query 48950 AGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACT 49009 || || | ||||| || ||||||||||||||||| |||||||||||||| ||||| | Sbjct 121942 TGAAATGGCGATTCTTGCTGCTAATATAGCATAATCAGGATGAATTGTTGT-CATGT--T 121886 Query 49010 AGAT---ATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCC 49066 || | | ||||||||| | ||||||| || || | |||||| |||| | ||| Sbjct 121885 AGCTGCAACTTCTGCTGCAAGATTATCTAACTCAACCGTTGATACACCATTATACAGTCC 121826 Query 49067 TTGAATAACTTT 49078 || |||||||| Sbjct 121825 CTGGATAACTTT 121814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562075755028920