Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_018855.1 Length=169158 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=897882 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 130561 TCTGCCTGGAATCCAGCCGAAATAAATCAAATGGCTCTTCCTCCTTGTCATATGTTCTAT 130620 ||||| ||||||||| | || | | |||||| | | ||||| ||||||| | | Sbjct 895365 TCTGCTTGGAATCCATCTGATCTTGGTGAAATGGTTTTGCCTCCATGTCATACACTAGTT 895424 Query 130621 CAATTTAATGTGCGTAATGGGCATCTTGATTTACAATGGTATCAACGCAGTGTAGATGTT 130680 |||||| |||| | ||||| | | || || | |||||||||||| | |||||| Sbjct 895425 CAATTTTATGTTCAAGATGGGGAGTTAAGTTGTCACTTGTATCAACGCAGCGGTGATGTT 895484 Query 130681 TTCTTGGGCTTACCATTCAACATTGCCTCGTACGCTGCCTTGACTCATATTGTAGCTAAG 130740 ||||| | ||||| |||||||| |||||| | ||||||||||| | || || Sbjct 895485 GGTTTGGGAGTTCCATTTAACATTGCTTCGTACTCACTTTTGACTCATATGATTGCAAAA 895544 Query 130741 ATGTGT 130746 || ||| Sbjct 895545 ATTTGT 895550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541145785521840