Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq63 158 4e-33 seq64 138 3e-27 seq11 136 1e-26 seq1661 120 9e-22 seq5 100 8e-16 seq21 93.3 1e-13 seq27 87.8 5e-12 seq3804 86.0 2e-11 >seq1 Length=1686976 Score = 165 bits (182), Expect = 2e-35 Identities = 525/807 (65%), Gaps = 13/807 (2%) Strand=Plus/Plus Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG 155630 ||||| || ||| |||||||| ||| |||||| || ||| || || | Sbjct 915508 ACAAAATTATTAAGTGCAATAGACCCCAAATTACAAACAGCAACTTCATTAGGGGAAGAA 915567 Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 ||| ||||| ||| || || || |||| || || || |||||||| | || ||| Sbjct 915568 AATTGAACAATTTCAGCACAAAGATTTGAACATTTTATTGTTCCTAAATTTTGTTGATTA 915627 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| ||||||| ||||||||| || || ||||| | || ||||| ||||| | Sbjct 915628 CTTTTACGGTTACAATGATCCTTGTAAAGCATATATGGAATACCCGTCTCTATCTGAGAT 915687 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || |||||| |||| | | | ||| || | ||| || | || | ||| Sbjct 915688 TCACAAATCTTCTGCCAAATATATCTGGCTTTTACTTGTTTCCTATAACGATTTTCATTT 915747 Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870 ||||||| | || || | |||| ||||| |||||||| || || || || Sbjct 915748 TCATATTGTACGTAAAGTTTATCAAAATCATCACCAAAACAATCATCAAGACCCGGACAT 915807 Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT---ACACGCTCCATAAATACA 155927 | || || || | | ||||||| | || || || ||||| | |||||||| | Sbjct 915808 TCATTAGGACACATTAACGACCAATGTGAAT---CGCTTTCAACACGTTTCATAAATAAA 915864 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGA-CTCCTCATCGCCGTGAT 155985 || |||||| | || || | || | ||| |||| || || || | ||| | Sbjct 915865 TCTGGAACCCAAAGTCCGTAAAATAAATCGCGTGCTCTTTCTTCTTCTGGTC-CTGTG-T 915922 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || ||| | |||| |||||| | ||| ||| |||| ||| ||||||| Sbjct 915923 TCTTTTTTAACTCAAGAAATTGGATAATATCTGCATGCCATGGTTCCAAATATATAGCAA 915982 Query 156046 AACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | |||| || || |||||| ||||| ||||| ||| |||| ||||| | |||| Sbjct 915983 ATGCACCAGGTCTTTTATTGCCACCTTGATCAACATAACGAACAGTACTATTGTAAACAC 916042 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 || ||| |||| | |||||| |||| ||||| ||||| |||| || || | | Sbjct 916043 GTAACATTGGAACCAAACCATTTGAAGATCCATTAGTTCCAGAAATAAATGATCCTGTGG 916102 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 || | || ||| || ||| | || || | | || ||||| ||| ||| Sbjct 916103 CACGGATTGTACTGATACTTAATCCTACCCCCCCAGCCGTCTTTGAAATAACAGCACATC 916162 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 ||||| ||| | | || ||||||||||||||||| ||| | || | | |||| | Sbjct 916163 GCTTTAAAGTGTCATAGATTCCTTCAATAGAATCATCACTCATCGTTAACAAAAAGCAGG 916222 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342 ||| | ||||||||| | || ||||| || |||| || || | | |||| |||||| Sbjct 916223 AACAAAGCTGAGGTCGTAGGGTACCAGCATTAAATAACGTTGGAGATCCATGGATAAAAA 916282 Query 156343 ACTTATTAGACATATAATCGTATGTCT 156369 || |||||||| |||||||| Sbjct 916283 GTCGTTTTGACATATATCTGTATGTCT 916309 >seq63 Length=153975 Score = 158 bits (174), Expect = 4e-33 Identities = 249/352 (71%), Gaps = 5/352 (1%) Strand=Plus/Minus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||||| | ||||||||||| ||||| ||||| || | | ||| |||||||||| ||| Sbjct 96629 CTTTTTCTTCCAACAGCATCTATTTCATCAATAAACAAAATACATGGAGAATTTTTTCTT 96570 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || || | ||| | || | ||| | |||| |||| ||||||| ||||||| | ||| Sbjct 96569 GCCATAGAAAACATATCACGTACTCTAGATGGACCAACACCAACAAACATTTCAAGAAAC 96510 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 || || | || ||| || || | |||||||||||| || || ||| | || || Sbjct 96509 TCCGATCCAGAAACTGTTATAAAAGGTACATTTGCTTCACCAGCAGTTGCTTTTGCAAGT 96450 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | ||| ||||| || ||||||||||| | || ||||||| || | ||| || || Sbjct 96449 AATGTTTTACCAGTACCAGGTGGTCCTGTGAGAAGTGCTCCCTTAGGAATTTTGGCACCG 96390 Query 289261 GCAGACTTATATTTCTCAGGGCTCTTTAA--AAATTCTACAATTTCCTCAAGTTCATATT 289318 | ||| |||| ||| || | ||||| ||||| || | |||| || ||| || Sbjct 96389 AGATTCTTGTATTGGTCA-GGATTTTTAAGGAAATT-AACGAATTCCATAATTTCTATTT 96332 Query 289319 TTGCCTCATCACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCTT 289370 |||| || |||||||| || ||||| |||||| | || ||||| ||||| Sbjct 96331 TTGCTTCCTCACATCCAGCAACATCTTTAAAAGTTACTTTGATATC-TTCTT 96281 >seq64 Length=153875 Score = 138 bits (152), Expect = 3e-27 Identities = 307/461 (67%), Gaps = 0/461 (0%) Strand=Plus/Minus Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128 || || || || || || || ||||| || || | | ||| ||||| | ||||| || Sbjct 122553 TGGTCGACGTAACGTGCTGTATTATTAAAAACCCTCAACATTGGAATCAATCCATTTGAT 122494 Query 156129 GTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCA 156188 || ||||| || || | |||| |||||| | | || | |||| || || ||| Sbjct 122493 GTCCCATTTGTCCCACCAATAAATGAACCATTAGCTCTAATACAGTGAACATTTAAGCCA 122434 Query 156189 ATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCA 156248 |||||||||| |||| || || |||||||| ||| | || | | |||| ||||| Sbjct 122433 ATACCACCTGCAGATTTCGAGATCAAAGCGCATTGCTTAAGTGTGTCGTAAATCCCTTCT 122374 Query 156249 ATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCA 156308 || |||||| | |||||| || || | || || || ||||| || ||||| Sbjct 122373 ATTGAATCACCAGCCATTGTTAATAAGAAACATGAGGACAACTGAGGACGCCTAGTTCCC 122314 Query 156309 GCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTC 156368 |||||||||| || || | |||||| | || |||| | ||||||||||||||| ||| Sbjct 122313 GCGTTGAATAAAGTTGGAGAAGCATGAGTGAACCACTTCTGAGACATATAATCGTAAGTC 122254 Query 156369 TCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGC 156428 || | | | || || |||||||| | | || || | |||| | | ||| Sbjct 122253 TCAATGACAGAATTAATATCTTCTCCGTGAATCCCAACAGCAACACGCATCAATAGATGT 122194 Query 156429 TGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTA 156488 ||||| | ||| |||| |||| || | ||| || | || |||| || || Sbjct 122193 TGAGGTCTCTCGGCAATTTTCCCATTTATCTTTAAAAGATAAGAACGCTCCAACGTCTTG 122134 Query 156489 AACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 || ||||||||| ||| |||||| | ||| ||| |||| Sbjct 122133 AAACCGAAATAAGAAAAGTCAAAATCCCTGTTATAAACAAT 122093 Score = 105 bits (116), Expect = 2e-17 Identities = 364/555 (66%), Gaps = 17/555 (3%) Strand=Plus/Minus Query 155328 TAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTCAGATGTAAATGCGATA 155387 |||||||| || || || | |||||| | | |||||| | || ||||||| |||| Sbjct 123114 TAAATTGTTTCGAAAATCTGTTTATTAAGTTCTTTAGCTTGAGGTGAGGTAAATG-GATA 123056 Query 155388 TC-CATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCT 155446 || ||| | |||| || || ||||| ||||| |||||||| | ||| || || || Sbjct 123055 TCTCATGAGCATGAATGCATCTGCCAAACCTTGAACACCAATACCTATTGGACGGTGTCT 122996 Query 155447 GTAATTGCTCCTGCTTGTCTTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTA 155505 ||| | || | ||||| | ||||||| |||||||||| ||||| ||||||| Sbjct 122995 CATATTAGAATTCCTAG-CTTCTGGAACTGGGTAATAATTCACATCGATAATCTTATTTA 122937 Query 155506 AATTTGTAACCAATACCTTGGTTACGTCTGCTAATT---TCACATAGTCAAATGTTTT-- 155560 |||| | ||| | || | || | | || | | || | || | ||| Sbjct 122936 AATTCCTGGTCAAAATTTTAGCAACATAGTGGAGTTGAGTAAAATTGAAAACAGGTTTCC 122877 Query 155561 -ATCCTC---ATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCT 155616 || || || ||||| || ||| |||||||| | ||||||||||| ||| || Sbjct 122876 CATTTTCTATATCAACAAATCTATTGAGAGCAATAGACCCTAGATTACATACAGCAA-CT 122818 Query 155617 CCTTGTCGTCG-CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCT 155675 | | | || | ||||| || ||||| || || ||||||| |||||| || || Sbjct 122817 TCATCTGGTGAACAATATTCAACGATCTCGGTACAGAGATTAGAACACTTGATAGTTCCA 122758 Query 155676 AAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCT 155735 | ||| | || ||| ||| | |||||| ||| || || | ||||| || || || Sbjct 122757 AGATTTTGTTGATTACTTTTCCGATTACAATGATCTTTATAAACCATGTAAGGTGTGCCA 122698 Query 155736 GTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG 155795 || || ||||| || ||||||| |||| | | | || ||||||||||| || Sbjct 122697 GTTTCAATCTGACTTTCACAAATCTTTTGCCAAATAACTCTTGCTTTAATTTGCTTTCTG 122638 Query 155796 TATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCA 155855 || | ||| ||||||||| || || | | | | || ||||| ||||||| Sbjct 122637 TAGCGTTTCTCCTCCTCATATTTGATGTATAATTTCTCGAATTCATCACCCCAACAATC- 122579 Query 155856 CTC-AGTCCAGGGCA 155869 ||| || ||||| || Sbjct 122578 CTCAAGCCCAGGACA 122564 >seq11 Length=551954 Score = 136 bits (150), Expect = 1e-26 Identities = 235/337 (70%), Gaps = 6/337 (2%) Strand=Plus/Minus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 ||||| ||||| || |||||||| ||||| ||||| | ||| || | ||| || Sbjct 153707 CTTTTAGAACCAATAGAGTCAATTTCATCAATAAAAATAATACAAGGTGCATTGCTCCTG 153648 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || || ||| || |||||||| | |||||| | ||||| | ||||| ||||| Sbjct 153647 GCTGTTCTAAACAAATCTCTTACTCTTTTTGCTCCTCGTCCAACCAAAATTTCATCAAAT 153588 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 ||||| | ||| || | |||| |||||||||||| || || ||||| | || | Sbjct 153587 TCAGATCCCGATTTATGGAAAAATGGTACATTTGCTTCACCAGCAACTGCACGAGCTAAT 153528 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | || ||||| ||||||||||| || | | | ||| || ||||||| |||| | ||| Sbjct 153527 AAAGTTTTACCGGTTCCAGGTGGACCAACAAGCAAAACACCTTTTGGTAATTTTCCACCA 153468 Query 289261 GCAGACTT--ATATTTCTCAGGGCTC-TTTAAAAATTCTACAATTTCCTCAAGTTCATAT 289317 || ||| ||| ||||| |||||| ||| |||||||||||||| | ||| | Sbjct 153467 --AGCCTTACATACTTCTC-GGGCTCACGTAAGTATTCTACAATTTCCATTAATTCGGCT 153411 Query 289318 TTTGCCTCATCACATCCTGCTACATCAGCAAAAGTAA 289354 |||| ||||| ||| |||||| |||| |||| Sbjct 153410 CTTGCTTCATCCATTCCCTTGACATCATCAAATGTAA 153374 Score = 120 bits (132), Expect = 9e-22 Identities = 229/335 (68%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 ||||| ||||| || ||||||||||||||| ||||| | ||| || | || ||| Sbjct 165236 CTTTTAGAACCAATAGAATCAATTTCGTCAATAAAAATAATACAAGGTGCTTTGCATCTA 165177 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || | ||| || ||||| | | | |||| | ||||| | ||||| |||| Sbjct 165176 GCTTCTTTAAACAAATCTCTCAATCTTTTTACTCCCTGTCCAACTGAAATTTCACCAAAC 165117 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 ||||| | ||| || | |||| || ||||||||| || || ||||| | |||| Sbjct 165116 TCAGATCCTGATTTATGGAAAAATGGTATATTTGCTTCACCAGCAACTGCACGAGCCAAT 165057 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | || || || ||||||||||| || | | | ||| |||||||||| |||||| ||| Sbjct 165056 AAAGTTTTGCCGGTTCCAGGTGGGCCAGCAAGCAAAACACCCTTTGGTAATTTTGCACCA 164997 Query 289261 GCAGACTTATATTTCTCAGGGCTC-TTTAAAAATTCTACAATTTCCTCAAGTTCATATTT 289319 || ||| |||||| ||||| || |||||||||||||| | ||| ||| Sbjct 164996 AGTCTCTCATACTTCTCA-GGCTCACGTAGGTATTCTACAATTTCCATTAATTCGGCTTT 164938 Query 289320 TGCCTCATCACATCCTGCTACATCAGCAAAAGTAA 289354 ||| ||||| ||| || ||| |||| |||| Sbjct 164937 TGCTTCATCCATTCCCTTGACGTCATCAAATGTAA 164903 >seq1661 Length=4412 Score = 120 bits (132), Expect = 9e-22 Identities = 229/335 (68%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 ||||| ||||| || ||||||||||||||| ||||| | ||| || | || ||| Sbjct 3962 CTTTTAGAACCAATAGAATCAATTTCGTCAATAAAAATAATACAAGGTGCTTTGCTTCTA 3903 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || | ||| || ||||| | | | |||| | ||||| | ||||| |||| Sbjct 3902 GCTTCTTTAAACAAATCTCTCAATCTTTTTACTCCCTGTCCAACTGAAATTTCACCAAAC 3843 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 ||||| | ||| || | |||| || ||||||||| || || ||||| | |||| Sbjct 3842 TCAGATCCTGATTTATGGAAAAATGGTATATTTGCTTCACCAGCAACTGCACGAGCCAAT 3783 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | || || || ||||||||||| || | | | ||| |||||||||| |||||| ||| Sbjct 3782 AAAGTTTTGCCGGTTCCAGGTGGGCCAGCAAGCAAAACACCCTTTGGTAATTTTGCACCA 3723 Query 289261 GCAGACTTATATTTCTCAGGGCTC-TTTAAAAATTCTACAATTTCCTCAAGTTCATATTT 289319 || ||| |||||| ||||| || |||||||||||||| | ||| ||| Sbjct 3722 AGTCTCTCATACTTCTCA-GGCTCACGTAGGTATTCTACAATTTCCATTAATTCGGCTTT 3664 Query 289320 TGCCTCATCACATCCTGCTACATCAGCAAAAGTAA 289354 ||| ||||| ||| || ||| |||| |||| Sbjct 3663 TGCTTCATCCATTCCCTTGACGTCATCAAATGTAA 3629 >seq5 Length=897882 Score = 100 bits (110), Expect = 8e-16 Identities = 274/420 (65%), Gaps = 15/420 (4%) Strand=Plus/Plus Query 381030 AGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAACGCCGATTATGA 381089 ||||| ||| | || ||| |||| || || || |||||||||||| || | ||||| Sbjct 895208 AGAAGGTGATTTGGGACCTGTTTATGGGTTCCAATGGAGACATTTTGGTGCTAAATATGA 895267 Query 381090 TAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAGTTAAAATATATCATAGACCA 381149 |||| ||| || || || || || || || || || | || | || ||||| Sbjct 895268 GGGAGTTGATGCTGACTACACAGGAAAAGGAGTTGATCAACTAGCAAATGTTATTGACCA 895327 Query 381150 GCTAAAAAAT---CCTGAAACAAGAAATTCACGCCGACTAATTATGACTGCGTGGAATCC 381206 |||| || ||| |||||| || | || | |||| |||||||| Sbjct 895328 AATAAAGAACAACCCTTCTTCAAGAA---------GAATTATCTTATCTGCTTGGAATCC 895378 Query 381207 TTGCCAGATTAATGATATGGCTTTACCACCTTGCCATATTTTATGCCAGTTCAATGTTTC 381266 | | || ||| |||| ||| || || || |||| || || || ||||| Sbjct 895379 ATCTGATCTTGGTGAAATGGTTTTGCCTCCATGTCATACACTAGTTCAATTTTATGTTCA 895438 Query 381267 GGCTGGTAATAAGTTAAGTTGTGCTTTATATCAGCGTAGCGGTGATGTTGGTCTGGGTGT 381326 | ||| | |||||||||| || ||||| || ||||||||||||||| |||| || Sbjct 895439 AGATGGGGA---GTTAAGTTGTCACTTGTATCAACGCAGCGGTGATGTTGGTTTGGGAGT 895495 Query 381327 TCCATTCAATATTGCTTCGTATTCTATGCTTACTCGTTTAATTGCTCATCACACTGGACT 381386 |||||| || ||||||||||| || | | |||| | | ||||| | |||| | Sbjct 895496 TCCATTTAACATTGCTTCGTACTCACTTTTGACTCATATGATTGCAAAAATTTGTGGAAT 895555 Query 381387 AATTGCGGGTGATTTTGTTTATTATCTCGGTAATACTCATATATACGACGACCATATTGA 381446 || | |||||||||||| | | | || || ||||||| || | |||||| ||| Sbjct 895556 AACAACTGGTGATTTTGTTCACACTATTGGCGATGCTCATATTTATAAAAACCATACTGA 895615 >seq21 Length=323752 Score = 93.3 bits (102), Expect = 1e-13 Identities = 238/360 (66%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 133229 TTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATG 133288 ||||| || |||||||| |||||||| ||| || ||||||| | | ||| Sbjct 30976 TTAGCCTTCTTTGCTGCATCGGATGGTATCGTTAACGAGAATTTAGTTGAAAGATTTTCA 30917 Query 133289 GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAAT 133348 ||||| || | |||| || || || ||||| | || ||||| ||||||||| Sbjct 30916 AAGGAAGTCCAGGTCCCCGAGGCACGCTTTTTCTATGGTTTTCAAATTGCCATGGAAAAT 30857 Query 133349 ATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG 133408 || ||| | | || || | || ||||| || ||||| ||| | ||| Sbjct 30856 ATTCATAGTGAGATGTACTCGAAACTTATTGAAACCTACATTCGTGATCAGGATGAGAGA 30797 Query 133409 CACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCT 133468 | ||||| |||||||| | |||||||||| || | ||||||| |||| |||||| Sbjct 30796 AATAAACTCTTCAACGCTTTGGATGAATTTCCTTTCATCAGAAAGAAAGCTGATTGGGCT 30737 Query 133469 ATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTA 133528 | | |||||| ||||| || | ||||| ||| | |||||||||| | Sbjct 30736 CTAAGATGGATTGCCGACAAAAACGCTACTTTTGGAGAACGTGTAATTGCTTTTGCAGCT 30677 Query 133529 GTAGAGGGCAtttttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAAAAGCGTGG 133587 || || || || || ||| |||| | || |||| | || || |||||||| || ||||| Sbjct 30676 GTTGAAGGAATATTCTTCTCTGGTTCATT-TGCTGCCATATTCTGGCTTAAGAAACGTGG 30618 >seq27 Length=255614 Score = 87.8 bits (96), Expect = 5e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 302490 GTCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGT 302549 ||| || ||||| || || || | |||||| ||| || | || ||| || || Sbjct 251440 GTCCATACCGTCTTCACCATATCTAAACTGAACAATTGAATTATCCGAATCTCTAACAGT 251381 Query 302550 CATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACC 302609 | ||||||| |||| ||| |||||| | || || | || | |||| ||||| Sbjct 251380 TAAGTCATAACAAATCTTAAGACCTTCCAAATGTTTAATAATACATCTTTGAAGGTAACC 251321 Query 302610 AGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAA 302669 || || |||||||||||||||||||| ||||| ||||||| |||||| |||||| Sbjct 251320 AGAACGGGAAGTTTTTACAGCTGTATCAATAAGACCTTCACGACCTGCCATAGTATGGAA 251261 Query 302670 GAATAGCTCTT 302680 ||||| |||| Sbjct 251260 GAATAATTCTT 251250 >seq3804 Length=1495 Score = 86.0 bits (94), Expect = 2e-11 Identities = 110/147 (75%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 289162 AATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGT 289221 |||| ||| ||||||||||| || | ||| | || |||| ||| ||||| ||||||||| Sbjct 1293 AATGGTACGTTTGCTTCGCCAGCAATTGCACGAGCTAGAAATGTTTTACCAGTTCCAGGT 1234 Query 289222 GGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAG 289279 || || | | | ||| || ||||||| | || | ||| || ||| ||| ||||| | Sbjct 1233 GGGCCAACAAGCAAAACACCTTTTGGTAATCTTCCACCA--AGCCTTACATACTTCTC-G 1177 Query 289280 GGCTC-TTTAAAAATTCTACAATTTCC 289305 ||||| | || |||||||||||||| Sbjct 1176 GGCTCATGTAGGTATTCTACAATTTCC 1150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471728912410911