Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 2e-12 >seq1 Length=1686976 Score = 89.7 bits (98), Expect = 2e-12 Identities = 110/147 (75%), Gaps = 5/147 (3%) Strand=Plus/Plus Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759 || ||||||||||| || | |||| |||| || || | |||||||| || ||| Sbjct 919848 ATTGTCATACGAGATGGGACGGCATGAGGATTTATAATGATGTCAGGAGACAATCCTTCT 919907 Query 309760 ATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGC 309818 ||| | |||||||||||||||| | ||||| |||| ||| || || || ||||| | Sbjct 919908 TTTG---TAAAAGGCATATCTTCTTGACGGTAC-ATCATACCCATTGTACCTTTTTGTCC 919963 Query 309819 GTGCCTGGAAGCAAACTTGTCACCAAT 309845 ||||| |||||||| || |||||||| Sbjct 919964 ATGCCTTGAAGCAAATTTATCACCAAT 919990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951856779512584