Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 3e-13 >seq5 Length=897882 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 279304 TGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGCAATTTTGTGTAGTGCA 279363 ||| |||| ||| ||| || || || ||||||| | || ||||||| ||| | Sbjct 895382 TGATCTTGGTGAAATGGTTTTGCCTCCATGTCATACACTAGTTCAATTTTATGTTCAAGA 895441 Query 279364 AGGAAAACTAAGCTGTATTCTGCATCAACGCTCCGCTGATCTATTTTTAGGAGTTCCATT 279423 || | |||| ||| || |||||||| || |||| | ||| ||||||||||| Sbjct 895442 TGGGGAGTTAAGTTGTCACTTGTATCAACGCAGCGGTGATGTTGGTTTGGGAGTTCCATT 895501 Query 279424 TAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACAAATTACTGGTTTAGATGT 279483 ||| || | |||||||| | ||||||||||||||| ||||| ||| || Sbjct 895502 TAACATTGCTTCGTACTCACTTTTGACTCATATGATTGCAAAAATTTGTGGAATAACAAC 895561 Query 279484 TGGTGAATTTATTTGGAATGGTGGTGATTGTCACATTTATAAAAACCA 279531 |||||| ||| || | | ||| ||| ||| |||||||||||||| Sbjct 895562 TGGTGATTTTGTTCACACTATTGGCGATGCTCATATTTATAAAAACCA 895609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115104002919907