Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 6e-16 >seq5 Length=897882 Score = 98.7 bits (108), Expect = 6e-16 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 19916 GTTATTAATGAGATTAAAACAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAAT 19975 |||||| | | || || | ||||| | ||| ||||| | || |||| | ||||||| Sbjct 895317 GTTATTGACCAAATAAAGAACAACCCTTCTTCAAGAAGAATTATCTTATCTGCTTGGAAT 895376 Query 19976 CCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTCTTTGTG 20035 || |||| ||| || | | ||| || || || ||||||||| ||||||| | ||| Sbjct 895377 CCATCTGATCTTGGTGAAATGGTTTTGCCTCCATGTCATACACTAGTTCAATTTTATGTT 895436 Query 20036 AAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTT--GGTG 20093 ||||||| | ||| ||| || ||||||||||| || | ||| | || || || | Sbjct 895437 CAAGATGGGGAGTTAAGTTGTCACTTGTATCAACGCAGCGGTGA--TGTTGGTTTGGGAG 895494 Query 20094 TTCCATTTAATATTGCATCTTA 20115 |||||||||| ||||| || || Sbjct 895495 TTCCATTTAACATTGCTTCGTA 895516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318992914975853