Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq64 86.0 8e-12 >seq64 Length=153875 Score = 86.0 bits (94), Expect = 8e-12 Identities = 159/229 (69%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGG-ACAACT 117900 ||||||||||||||| || | || | ||||| | | | |||||| || |||| | Sbjct 123667 GTAGTACATCCCCGTTTTTAATCCACGTTTCCAACCGTGAAAATGCATAGAACTACAAAT 123608 Query 117901 TGGAGAGGGTTGGACTTTCCA--TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCG 117958 || | | | | || || ||| ||||| ||| | ||| |||||||| ||||| Sbjct 123607 TGCATATGAT-GGTCTAGCCACATGAAG--GTTAAGGGATTGTGATTGATCAATGAAAGC 123551 Query 117959 TCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTA 118018 || ||||| || ||||| ||||| | ||| ||| ||||||||| ||||| | || Sbjct 123550 ACCACGATCAGCAGCCATCTCAATAATATCTTTCTGGGAGATTTCCCATACAGTTTTATA 123491 Query 118019 GAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCA 118067 || | |||||||||| || || || ||||||||||| |||||| Sbjct 123490 AAGCTCTTTAATATCATTGGGTATTTCTTTTATATTTTGGATAGATCCA 123442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618398843740680