Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 5e-14 >seq21 Length=323752 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 |||| | ||||| | || ||||||||| || |||||||| ||||||||||| || || Sbjct 30706 TTTGGAGAACGTGTAATTGCTTTTGCAGCTGTTGAAGGAATATTCTTCTCTGGTTCATTT 30647 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 ||| || |||||||| || || |||||| | ||||| || | | || || ||| Sbjct 30646 GCTGCCATATTCTGGCTTAAGAAACGTGGCTTGATGCCCGGGTTAACACATTCGAATGAG 30587 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCA 60131 |||||||||| || ||||| | || | || |||||| Sbjct 30586 TTGATTTCCCGAGATGAGGGGTTACACCGTGATTTTGCA 30548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548492553598320