Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 645 4e-180 seq2 587 1e-162 >seq1 Length=11693564 Score = 645 bits (714), Expect = 4e-180 Identities = 1434/2138 (67%), Gaps = 57/2138 (3%) Strand=Plus/Plus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || ||||| || | || || |||||||| ||||||| || | |||| | | |||| Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233 Query 62127 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 62183 ||||| ||| | ||| ||| || | || | ||| | ||| | ||||| Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290 Query 62184 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATT 62243 |||||| || || || || | || |||||||| | || || ||||| | ||| Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350 Query 62244 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 62300 ||||||| ||||||||||| | ||||||| ||||| | | || || || || Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410 Query 62301 GATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62360 |||||| || | || ||| |||| | | ||| ||| |||||| || || || Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470 Query 62361 AAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTG 62420 ||| || |||| ||||| || || || | |||||| ||||| || | || | | |||| Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530 Query 62421 TAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62480 ||||| ||| ||||| ||||| | || ||||||||||| | ||| || |||||||| Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590 Query 62481 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 62538 ||||| ||||| || || | |||||| |||||| | ||| ||||| || || | Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648 Query 62539 CTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTA 62598 |||||| | |||||||| ||| | ||| ||| ||| |||||| | Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708 Query 62599 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCA 62654 ||||||| || ||||| | |||| ||||||| ||||| || || || ||| Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764 Query 62655 GCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTT 62714 |||| || ||| || || ||||| || | ||||| |||||||| ||| |||||| Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824 Query 62715 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62774 || |||| || | || | || |||||| | || ||||| || || ||||| Sbjct 6013825 AGTTCTTTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAA 6013884 Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62834 || |||||||||||||| || || | |||||| |||| || || ||||| || | | Sbjct 6013885 CCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACA 6013944 Query 62835 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGA--CCA 62889 ||||||||||| | ||| ||||||||||| | |||| | | |||| || || | | Sbjct 6013945 GGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAAACAA 6014002 Query 62890 CATCCTTCAGTTTGAGA---AAATCAAATCGCCCATCTA----TT--ACAAACATGTTCA 62940 ||| |||||| | ||| || | ||||||| || ||||| | || | Sbjct 6014003 CATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAA 6014062 Query 62941 ATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCT 63000 |||| |||| | |||||||| || || || |||| | | ||||| | || | Sbjct 6014063 GAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAATTT 6014122 Query 63001 CAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 63060 |||| || | ||| ||| || || ||||| | ||||||||||||||| || |||| Sbjct 6014123 CAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTAC 6014182 Query 63061 ACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 63120 | ||| || |||| || | || || || |||||||| ||| ||| |||| || Sbjct 6014183 AATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTT 6014242 Query 63121 TCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC--TTTCGTA-TAGAG 63177 ||| | |||| ||||||||| | ||| | | | |||||| |||| || | | | Sbjct 6014243 GCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTGTG 6014300 Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237 ||| ||| || || | || |||||| || || | || ||||||||| | || | Sbjct 6014301 -ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGC 6014359 Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297 ||||||| ||||| | ||| | || || ||||||||||| | |||||||||||||| Sbjct 6014360 ACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAA 6014419 Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357 || | ||||| ||| | | ||| | ||| || |||||||| || |||||||| | Sbjct 6014420 GACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCA 6014479 Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417 || | | ||| |||| |||||| ||||| | ||||| || | ||||||| | || Sbjct 6014480 AAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTT 6014539 Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477 | ||||| || || || | || | || || || ||| |||||||||||||||| || | Sbjct 6014540 TATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTA 6014599 Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA 63537 || || ||| ||||||| ||||| ||| | ||| | ||||||||| | || Sbjct 6014600 ATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAA 6014659 Query 63538 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63597 | || || || || || ||| || |||||||| ||| |||| | || |||| Sbjct 6014660 CATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCAT 6014719 Query 63598 AGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63657 | || ||||| || |||||| ||| | |||| ||||| ||||| || ||| Sbjct 6014720 ATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGGAC 6014779 Query 63658 GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGT 63716 | | ||||| ||||||||||| || ||||| || || |||||||| || | ||| | | Sbjct 6014780 GTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATAT 6014839 Query 63717 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63776 || | || || |||||| | || | ||||| ||||||||| ||||| |||||| Sbjct 6014840 AG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGC 6014898 Query 63777 ATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTT 63836 ||||| | || || ||||||||| ||| ||| |||||||| || | || || | Sbjct 6014899 ATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGT 6014958 Query 63837 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAA 63896 || | || ||||| |||||||| | | ||| |||| | |||| ||| | ||| Sbjct 6014959 TCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAA 6015018 Query 63897 TTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAAT------ACTTGAAATAATC 63950 || || ||||| || ||| || | || | || | | |||| || || Sbjct 6015019 TTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTT---ATCATT 6015072 Query 63951 GGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA 64010 || ||||| || || || || | |||||| |||| || ||| |||| | Sbjct 6015073 GGCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAA 6015132 Query 64011 AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCA 64070 || ||| ||||||| || || | ||| || | || ||||| || ||||| || ||| Sbjct 6015133 AAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCA 6015192 Query 64071 TAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCT 64130 ||||| ||||| ||| || | | || | | ||| || || | | | || ||||| Sbjct 6015193 TAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCA 6015252 Query 64131 ACCGTTGTTACTCCATTATATATTCCTTGAATAACCTT 64168 || |||| ||| |||||||| | |||||| ||||| || Sbjct 6015253 ACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290 >seq2 Length=16759152 Score = 587 bits (650), Expect = 1e-162 Identities = 1378/2055 (67%), Gaps = 55/2055 (3%) Strand=Plus/Minus Query 62064 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 62123 || || ||||| || | || ||| |||||||||||||||| || | ||||||| ||| Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 62124 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 62180 |||||||| ||| || | |||| | || | || || | | | | ||| Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361 Query 62181 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGC 62239 ||| |||||| || || | |||| || ||||||||| || || ||||||| ||| Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302 Query 62240 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 62296 ||||||||| | ||||||||||| | | || |||| ||||| | | |||| || Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242 Query 62297 AATGGATCCACCATCTACCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 62355 |||||||||| || | | || || |||| | ||| | |||||||| | || Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183 Query 62356 CGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCC 62415 ||||| | | || ||||| | || || ||||| || |||||||| || |||| || Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123 Query 62416 GAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAG 62475 || || |||||| ||||| ||||| | || ||||| ||||| | |||||||| | Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063 Query 62476 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 62535 | ||||| || ||||| || || | ||||| ||| | |||||| | | | |||| Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003 Query 62536 TATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATT 62595 | |||| | ||||| | ||| | ||| || | |||| ||| | Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943 Query 62596 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCA 62654 | ||||| || || || | | ||| | | |||| ||||| ||| | ||||| Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884 Query 62655 GCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTT 62714 | | || ||| || || | |||||| | |||||| |||||||| || || |||| Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824 Query 62715 AGATCTTGTGCTTCCGG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAA 62773 ||||||| ||||| || | | | ||| ||||| | | || | ||| | || || | Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765 Query 62774 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62833 ||||||||||||||| || || || | ||| | ||| || | ||||||| | Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705 Query 62834 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 62890 |||||| |||||||||| ||||||||||| | |||||| |||||| |||| | || Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648 Query 62891 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT------------ACAAACATGTT 62938 ||| | || | ||| |||||| | | || |||||||| || Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588 Query 62939 CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62998 | ||||| ||||| | |||||| || || || || | | | |||||| || || Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528 Query 62999 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63058 ||||| || ||||| ||| | || ||||||||||||||||||||||| || || Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468 Query 63059 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63118 ||| ||| ||||||| || ||||| |||||||||||||||||||||| ||| Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408 Query 63119 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCCTTTCTCTTTCGTATAGA 63176 | ||| || | || ||| |||||| | ||| | | || |||| |||| ||| | Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350 Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236 |||| | | || || | || || || ||| || | | |||||||||| ||| Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290 Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296 ||||| || ||||| | || | | || ||||||||||| | ||| |||| |||| Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230 Query 63297 AGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63356 || | ||||| ||| | | ||| ||| || ||||| || ||| | | ||| Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170 Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416 | || |||| ||||||| |||||| ||||||||||| || || | | ||||| ||| Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110 Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476 || || || |||||||| | || | ||| || |||||||||| | |||||||| || Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050 Query 63477 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTA 63536 | ||| |||||| ||||| || || | ||| | |||| |||||||| | Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990 Query 63537 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63596 || || || ||||| || || ||| || |||| || ||| |||| || |||||| Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930 Query 63597 TAGATGCCTTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655 || || ||||| || |||||| || |||||| || |||||| || | ||| Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871 Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715 ||||| |||||| ||||||||||| || || ||||| || |||||||||||| ||| | Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812 Query 63716 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63774 || || || ||||||||||| || | ||||| | ||||||| ||| || || | Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752 Query 63775 GCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATT 63834 |||||||||| | ||||||||||| |||||||| | || ||| | || || || ||| Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692 Query 63835 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63893 ||| | ||| |||| |||||||| || || |||| ||| ||| | |||||| Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633 Query 63894 GAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT--GAAATAATCG 63951 || | || || || ||| | || || | ||| || | ||| | || | | Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575 Query 63952 GAGAATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 64008 || |||||| || | ||| | || ||| || ||||||| | ||| |||||| Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518 Query 64009 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGG 64068 |||| ||||| |||| || || | ||||| ||||| || | || |||| | Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458 Query 64069 CATAATCCGGATGTT 64083 ||||||| ||||||| Sbjct 8584457 CATAATCAGGATGTT 8584443 Score = 269 bits (298), Expect = 3e-67 Identities = 526/770 (68%), Gaps = 19/770 (2%) Strand=Plus/Minus Query 33267 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33326 || ||| ||||||||| || | ||| || |||||| || ||| || || ||||| Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704 Query 33327 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtt 33386 |||||||| || | ||| ||||| |||| |||||||| || || ||||||| |||| | Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644 Query 33387 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446 ||| | | | ||| | ||| || || || |||| |||||||| || | Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587 Query 33447 ATTTCAC---AATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 33503 ||| || | |||||||| || | | ||| |||||||| | ||||| |||| | | Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527 Query 33504 TCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAAT 33563 ||||| || |||||| | ||||| | | | ||||||| ||| ||| | Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTTT 14764469 Query 33564 AAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 33621 || || ||||||| | || |||||||| | ||| | ||||| ||||| ||| | Sbjct 14764468 CAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCA 14764409 Query 33622 ATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAG 33681 |||| || ||| || | ||| ||||| | ||||| || || |||||||||||||||| Sbjct 14764408 ATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAG 14764349 Query 33682 CGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT 33741 | ||||| || ||||||||||| ||||| || || ||||| ||||||| || |||||| Sbjct 14764348 CAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAA 14764289 Query 33742 AACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 33798 || || | ||| ||||| || ||||||||| || || ||| | | | | | Sbjct 14764288 AAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATG 14764229 Query 33799 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 33858 | | | |||| |||||||| || | || |||| | | | || | ||| || | Sbjct 14764228 GAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTT 14764169 Query 33859 CGATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 33915 |||| ||| | |||||| || ||||| ||||| ||||| || || || || | Sbjct 14764168 CGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCAT 14764112 Query 33916 AGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCAT 33975 |||| | | ||||||| ||| || |||||| || |||||| || | ||||| |||| Sbjct 14764111 AGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCAT 14764052 Query 33976 TCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 | || || |||||| || ||||| || || || ||| || |||||| Sbjct 14764051 TAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816537182800