Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 645 4e-180
seq2 587 1e-162
>seq1
Length=11693564
Score = 645 bits (714), Expect = 4e-180
Identities = 1434/2138 (67%), Gaps = 57/2138 (3%)
Strand=Plus/Plus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126
|| ||||| || | || || |||||||| ||||||| || | |||| | | ||||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 62127 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 62183
||||| ||| | ||| ||| || | || | ||| | ||| | |||||
Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290
Query 62184 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATT 62243
|||||| || || || || | || |||||||| | || || ||||| | |||
Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350
Query 62244 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 62300
||||||| ||||||||||| | ||||||| ||||| | | || || || ||
Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410
Query 62301 GATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62360
|||||| || | || ||| |||| | | ||| ||| |||||| || || ||
Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470
Query 62361 AAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTG 62420
||| || |||| ||||| || || || | |||||| ||||| || | || | | ||||
Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530
Query 62421 TAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62480
||||| ||| ||||| ||||| | || ||||||||||| | ||| || ||||||||
Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590
Query 62481 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 62538
||||| ||||| || || | |||||| |||||| | ||| ||||| || || |
Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648
Query 62539 CTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTA 62598
|||||| | |||||||| ||| | ||| ||| ||| |||||| |
Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708
Query 62599 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCA 62654
||||||| || ||||| | |||| ||||||| ||||| || || || |||
Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764
Query 62655 GCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTT 62714
|||| || ||| || || ||||| || | ||||| |||||||| ||| ||||||
Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824
Query 62715 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62774
|| |||| || | || | || |||||| | || ||||| || || |||||
Sbjct 6013825 AGTTCTTTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAA 6013884
Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62834
|| |||||||||||||| || || | |||||| |||| || || ||||| || | |
Sbjct 6013885 CCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACA 6013944
Query 62835 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGA--CCA 62889
||||||||||| | ||| ||||||||||| | |||| | | |||| || || | |
Sbjct 6013945 GGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAAACAA 6014002
Query 62890 CATCCTTCAGTTTGAGA---AAATCAAATCGCCCATCTA----TT--ACAAACATGTTCA 62940
||| |||||| | ||| || | ||||||| || ||||| | || |
Sbjct 6014003 CATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAA 6014062
Query 62941 ATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCT 63000
|||| |||| | |||||||| || || || |||| | | ||||| | || |
Sbjct 6014063 GAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAATTT 6014122
Query 63001 CAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 63060
|||| || | ||| ||| || || ||||| | ||||||||||||||| || ||||
Sbjct 6014123 CAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTAC 6014182
Query 63061 ACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 63120
| ||| || |||| || | || || || |||||||| ||| ||| |||| ||
Sbjct 6014183 AATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTT 6014242
Query 63121 TCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC--TTTCGTA-TAGAG 63177
||| | |||| ||||||||| | ||| | | | |||||| |||| || | | |
Sbjct 6014243 GCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTGTG 6014300
Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237
||| ||| || || | || |||||| || || | || ||||||||| | || |
Sbjct 6014301 -ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGC 6014359
Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297
||||||| ||||| | ||| | || || ||||||||||| | ||||||||||||||
Sbjct 6014360 ACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAA 6014419
Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
|| | ||||| ||| | | ||| | ||| || |||||||| || |||||||| |
Sbjct 6014420 GACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCA 6014479
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
|| | | ||| |||| |||||| ||||| | ||||| || | ||||||| | ||
Sbjct 6014480 AAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTT 6014539
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
| ||||| || || || | || | || || || ||| |||||||||||||||| || |
Sbjct 6014540 TATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTA 6014599
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA 63537
|| || ||| ||||||| ||||| ||| | ||| | ||||||||| | ||
Sbjct 6014600 ATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAA 6014659
Query 63538 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63597
| || || || || || ||| || |||||||| ||| |||| | || ||||
Sbjct 6014660 CATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCAT 6014719
Query 63598 AGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63657
| || ||||| || |||||| ||| | |||| ||||| ||||| || |||
Sbjct 6014720 ATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGGAC 6014779
Query 63658 GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGT 63716
| | ||||| ||||||||||| || ||||| || || |||||||| || | ||| | |
Sbjct 6014780 GTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATAT 6014839
Query 63717 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63776
|| | || || |||||| | || | ||||| ||||||||| ||||| ||||||
Sbjct 6014840 AG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGC 6014898
Query 63777 ATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTT 63836
||||| | || || ||||||||| ||| ||| |||||||| || | || || |
Sbjct 6014899 ATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGT 6014958
Query 63837 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAA 63896
|| | || ||||| |||||||| | | ||| |||| | |||| ||| | |||
Sbjct 6014959 TCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAA 6015018
Query 63897 TTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAAT------ACTTGAAATAATC 63950
|| || ||||| || ||| || | || | || | | |||| || ||
Sbjct 6015019 TTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTT---ATCATT 6015072
Query 63951 GGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA 64010
|| ||||| || || || || | |||||| |||| || ||| |||| |
Sbjct 6015073 GGCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAA 6015132
Query 64011 AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCA 64070
|| ||| ||||||| || || | ||| || | || ||||| || ||||| || |||
Sbjct 6015133 AAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCA 6015192
Query 64071 TAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCT 64130
||||| ||||| ||| || | | || | | ||| || || | | | || |||||
Sbjct 6015193 TAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCA 6015252
Query 64131 ACCGTTGTTACTCCATTATATATTCCTTGAATAACCTT 64168
|| |||| ||| |||||||| | |||||| ||||| ||
Sbjct 6015253 ACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
>seq2
Length=16759152
Score = 587 bits (650), Expect = 1e-162
Identities = 1378/2055 (67%), Gaps = 55/2055 (3%)
Strand=Plus/Minus
Query 62064 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 62123
|| || ||||| || | || ||| |||||||||||||||| || | ||||||| |||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 62124 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 62180
|||||||| ||| || | |||| | || | || || | | | | |||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 62181 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGC 62239
||| |||||| || || | |||| || ||||||||| || || ||||||| |||
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302
Query 62240 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 62296
||||||||| | ||||||||||| | | || |||| ||||| | | |||| ||
Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242
Query 62297 AATGGATCCACCATCTACCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 62355
|||||||||| || | | || || |||| | ||| | |||||||| | ||
Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183
Query 62356 CGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCC 62415
||||| | | || ||||| | || || ||||| || |||||||| || |||| ||
Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123
Query 62416 GAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAG 62475
|| || |||||| ||||| ||||| | || ||||| ||||| | |||||||| |
Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063
Query 62476 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 62535
| ||||| || ||||| || || | ||||| ||| | |||||| | | | ||||
Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003
Query 62536 TATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATT 62595
| |||| | ||||| | ||| | ||| || | |||| ||| |
Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943
Query 62596 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCA 62654
| ||||| || || || | | ||| | | |||| ||||| ||| | |||||
Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884
Query 62655 GCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTT 62714
| | || ||| || || | |||||| | |||||| |||||||| || || ||||
Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824
Query 62715 AGATCTTGTGCTTCCGG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAA 62773
||||||| ||||| || | | | ||| ||||| | | || | ||| | || || |
Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765
Query 62774 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62833
||||||||||||||| || || || | ||| | ||| || | ||||||| |
Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705
Query 62834 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 62890
|||||| |||||||||| ||||||||||| | |||||| |||||| |||| | ||
Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648
Query 62891 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT------------ACAAACATGTT 62938
||| | || | ||| |||||| | | || |||||||| ||
Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588
Query 62939 CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62998
| ||||| ||||| | |||||| || || || || | | | |||||| || ||
Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528
Query 62999 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63058
||||| || ||||| ||| | || ||||||||||||||||||||||| || ||
Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468
Query 63059 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63118
||| ||| ||||||| || ||||| |||||||||||||||||||||| |||
Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408
Query 63119 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCCTTTCTCTTTCGTATAGA 63176
| ||| || | || ||| |||||| | ||| | | || |||| |||| ||| |
Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350
Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236
|||| | | || || | || || || ||| || | | |||||||||| |||
Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290
Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296
||||| || ||||| | || | | || ||||||||||| | ||| |||| ||||
Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230
Query 63297 AGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63356
|| | ||||| ||| | | ||| ||| || ||||| || ||| | | |||
Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170
Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416
| || |||| ||||||| |||||| ||||||||||| || || | | ||||| |||
Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110
Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476
|| || || |||||||| | || | ||| || |||||||||| | |||||||| ||
Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050
Query 63477 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTA 63536
| ||| |||||| ||||| || || | ||| | |||| |||||||| |
Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990
Query 63537 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63596
|| || || ||||| || || ||| || |||| || ||| |||| || ||||||
Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930
Query 63597 TAGATGCCTTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
|| || ||||| || |||||| || |||||| || |||||| || | |||
Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
||||| |||||| ||||||||||| || || ||||| || |||||||||||| ||| |
Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812
Query 63716 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63774
|| || || ||||||||||| || | ||||| | ||||||| ||| || || |
Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752
Query 63775 GCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATT 63834
|||||||||| | ||||||||||| |||||||| | || ||| | || || || |||
Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692
Query 63835 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63893
||| | ||| |||| |||||||| || || |||| ||| ||| | ||||||
Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633
Query 63894 GAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT--GAAATAATCG 63951
|| | || || || ||| | || || | ||| || | ||| | || | |
Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575
Query 63952 GAGAATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 64008
|| |||||| || | ||| | || ||| || ||||||| | ||| ||||||
Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518
Query 64009 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGG 64068
|||| ||||| |||| || || | ||||| ||||| || | || |||| |
Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458
Query 64069 CATAATCCGGATGTT 64083
||||||| |||||||
Sbjct 8584457 CATAATCAGGATGTT 8584443
Score = 269 bits (298), Expect = 3e-67
Identities = 526/770 (68%), Gaps = 19/770 (2%)
Strand=Plus/Minus
Query 33267 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33326
|| ||| ||||||||| || | ||| || |||||| || ||| || || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 33327 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtt 33386
|||||||| || | ||| ||||| |||| |||||||| || || ||||||| |||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 33387 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446
||| | | | ||| | ||| || || || |||| |||||||| || |
Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587
Query 33447 ATTTCAC---AATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 33503
||| || | |||||||| || | | ||| |||||||| | ||||| |||| | |
Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527
Query 33504 TCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAAT 33563
||||| || |||||| | ||||| | | | ||||||| ||| ||| |
Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTTT 14764469
Query 33564 AAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 33621
|| || ||||||| | || |||||||| | ||| | ||||| ||||| ||| |
Sbjct 14764468 CAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCA 14764409
Query 33622 ATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAG 33681
|||| || ||| || | ||| ||||| | ||||| || || ||||||||||||||||
Sbjct 14764408 ATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAG 14764349
Query 33682 CGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT 33741
| ||||| || ||||||||||| ||||| || || ||||| ||||||| || ||||||
Sbjct 14764348 CAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAA 14764289
Query 33742 AACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 33798
|| || | ||| ||||| || ||||||||| || || ||| | | | | |
Sbjct 14764288 AAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATG 14764229
Query 33799 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 33858
| | | |||| |||||||| || | || |||| | | | || | ||| || |
Sbjct 14764228 GAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTT 14764169
Query 33859 CGATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 33915
|||| ||| | |||||| || ||||| ||||| ||||| || || || || |
Sbjct 14764168 CGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCAT 14764112
Query 33916 AGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCAT 33975
|||| | | ||||||| ||| || |||||| || |||||| || | ||||| ||||
Sbjct 14764111 AGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCAT 14764052
Query 33976 TCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025
| || || |||||| || ||||| || || || ||| || ||||||
Sbjct 14764051 TAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816537182800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |