Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 645 3e-180 seq2 637 4e-178 >seq1 Length=11693564 Score = 645 bits (714), Expect = 3e-180 Identities = 1264/1848 (68%), Gaps = 39/1848 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| | ||||| | || || | || | ||||||||| | ||||||||||||||| Sbjct 6013147 TCAACACTAAATTTAACAGCATCAGCAGCAGGTTTTGTTCTTAAGTAATACATTCCAGTT 6013206 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCAT---ACTGGTCAGTTTTGCGTATGTAGGA 36906 |||| || | |||| | | ||||||||| ||| | | || |||| || Sbjct 6013207 TTTAATCCACGTTTCCAACTATGAAAATGCATTGAACTACAAA---TGGCATATGATGGT 6013263 Query 36907 TTATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCC 36966 ||| | | || | | | ||||| |||||||||||| ||||| | || || ||| Sbjct 6013264 TTAGCAACATGAAGATTAAGCGATTGTGATTGATCTATAAAAGCACCACGATCAGCAGCC 6013323 Query 36967 ATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTA 37026 || || | ||| |||||||||||| |||||||| |||||||| | || ||| |||||| Sbjct 6013324 ATCTCAATTATATCTTTTTGAGATATTTCCCAAACAGTTTTATAAAGTTCTTTAATATTA 6013383 Query 37027 TCTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAAC-ACAATTGTATTCTTTAT 37082 ||| | ||| | || ||| ||||| ||||||| || | | || |||| ||| Sbjct 6013384 GGTGGAATTTCTTTAATATTTTGGATAGATCCATTAT-TAGCTATTATCTCATTCATTAA 6013442 Query 37083 GTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTG 37142 || | | |||| || || | |||| ||| | | || || ||||| |||| || Sbjct 6013443 CTCTTCACTCCATATGTTAAGATCAATTAAATCTTTAAGAAGATGAGGATTGACAATTTG 6013502 Query 37143 AAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTC 37202 |||||||| || | || | ||| || || || || ||||||||||||||| || || Sbjct 6013503 GAAATCTCCTGAAAGAACACGTCTAGTGTAAATGTTAGAAGTATATGGTTCAATAGATTC 6013562 Query 37203 ATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATT 37262 |||||| | || || || | || || ||||| |||||||| || | || | ||| Sbjct 6013563 ATTATTTCCTAGAATCTGTGCAGTTGAAGCAGTTGGCATTGGAGCAAGTAATAAAGAATT 6013622 Query 37263 TCTCAATCCATGTGTATTAAT-TCT-CTTTTTTAGTTCATTCCAATCCCATAAATCTGTT 37320 ||| | |||||| | ||| ||| ||||| |||| | ||||||||||||||| || Sbjct 6013623 TCTTACACCATGTTTTGCAATGTCTGCTTTTAAAGTT--TCCCAATCCCATAAATCACTT 6013680 Query 37321 GGGTT--CTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTAT 37378 || || | || |||||| |||||||| ||||||||||| ||||||| | | || Sbjct 6013681 GGTTTGACATT--CCACATGTCATATTGAAGAATACCTTTTGATACTGGAGATCCATCAT 6013738 Query 37379 ATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAAT 37438 ||||||||||||| || | | || ||||| ||| || || ||| | ||| ||| | Sbjct 6013739 ATGTCTCATAAGGACCATCACGTTCAGCTACTTCACATGAAGCTTCCAATGCTCCATGGT 6013798 Query 37439 ATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGC 37498 | |||||||| ||||| |||| | | ||| || | | ||| | ||| | Sbjct 6013799 AAATTGTTTCAAAAATCAACTTATTAAGTTCTTTAGCGGCAGGTGAAGTGAAAGGATAAC 6013858 Query 37499 CCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCT 37558 || | ||||| ||||||| |||||||||||||| ||||| || || | ||| || Sbjct 6013859 GCATAAGCATAAATGCATCAGCTAAACCCTGAACACCAATACCAATTGGACGGTGTCTCA 6013918 Query 37559 TATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGAT 37618 |||| ||| | | ||| || ||||||||||||| ||| || |||||||| | || Sbjct 6013919 TATTTGATTTTCTGGCTTCAGGGACAGGATAATAATTGACATCAATAATTTTATTCAAAT 6013978 Query 37619 TTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTC-GAACATAAATAC--GTT----A 37671 ||||| ||| ||||| | || | | || |||| ||| |||| | ||| | Sbjct 6013979 TTTTAGTTAGAATTTTAGAAACAACA-TGAAGTTGTTTGAAATTAAAAGCAGGTTTACCA 6014037 Query 37672 T-TA-----TTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCA 37725 | || | ||||||| || | | | ||||||||||||||||||||||||||||||| Sbjct 6014038 TCTACAACTTCAACAAATCTATTAAGAGCAATAGATCCTAGATTACATACAGCAACTTCA 6014097 Query 37726 TCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAA 37785 ||| || | ||| | ||| || ||||| | ||| || |||| ||||| | | Sbjct 6014098 TCTGGTGCACAATATTCAACAATTTCAGTACATAAATTTGAACATTTAATGGTTCCAAGA 6014157 Query 37786 TTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGT 37845 || |||||| ||| ||||||| |||||| || | ||||| || ||||| | Sbjct 6014158 TTTTGTTGATTACTTTTACGATTACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTT 6014217 Query 37846 TCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAAC--GATCGCTTTAA 37903 || |||||| || ||| || ||| | | ||| || || | | | || ||| Sbjct 6014218 TCAATTTGACTTTCACAAATCTTTTGCCAAATAACTCTGGCCTTTATTTGTTTTCTGTAA 6014277 Query 37904 tttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGC 37963 ||| || || ||| || | |||||||| | |||| | | ||||| ||| Sbjct 6014278 CGTTTCTCATT--TTCATACTTGTGATATAATTCCTCAAAAGCCTCACCCCAAGTATCCT 6014335 Query 37964 ATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTT 38023 | ||| ||||||||| || ||||| | |||||| | ||||| ||||| |||| Sbjct 6014336 CAAGTCCAGGACATTCGTGGGGGCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTT 6014395 Query 38024 CCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGT 38083 ||||||||||||||| | ||| | || ||||||||| | ||| | |||||| Sbjct 6014396 TCATAAATAAATCAGGAATCCAAAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAG 6014455 Query 38084 TCCCTACATTCTTTCTTAAGCTTAGAAAAT-CGAATATATCAGCGTGCCATGGTTCTATA 38142 ||| ||| ||||||||| | ||||| | || || ||||| ||||||||||||| | Sbjct 6014456 GGCCTGTATT-TTTCTTAAGATCCAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGA 6014514 Query 38143 TAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTA 38202 || || | | |||||| |||||||||| || || || | || ||| | |||| || Sbjct 6014515 TATATAGCAAATGCTCCAGGTCTTTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTG 6014574 Query 38203 TTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAA 38262 ||| | | ||| ||||| |||| || ||||||||| | || ||| |||| ||| || Sbjct 6014575 TTAAAAACTCTCAACATTGGTATTAATCCATTAGATGTACCATTTGTACCACCAATAAAA 6014634 Query 38263 GTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATT 38322 | ||| ||||| || ||| | | |||||| || || || ||| |||||| ||| Sbjct 6014635 GAACCATTAGCACGAATACAATGAACATTCAATCCAATACCGCCAGCAGATTTTGAAATT 6014694 Query 38323 AAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGT 38382 || || |||||||| | |||||| |||||||||| || ||||| |||| |||| Sbjct 6014695 AATGCACATTGTTTAAGAGTATCATATATACCTTCAATTGAATCATCAGACATTGTTAGT 6014754 Query 38383 ATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCA 38442 | ||||| ||||| || || | ||||| || ||||||||||| ||||| ||| Sbjct 6014755 AAGAAACACGAAGACAGCTGTGGACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCA 6014814 Query 38443 TGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCG 38502 || | ||||| || | |||| ||| | ||||||||| || ||| || |||||| | Sbjct 6014815 TGAGTAAACCACTTCTGAGACATATAGTCATATGTTTCAATAACAGAATTAATATCATCC 6014874 Query 38503 CCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTA 38562 || ||||| || | | || | ||||| | ||||||||||||||| | ||| | Sbjct 6014875 CCATGAATTCCAACTGCCACACGCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCA 6014934 Query 38563 TTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAA 38610 || ||| | |||||| || ||| | ||| || | |||||||||| Sbjct 6014935 TTTATTTTTAATAGATATGAACGTTCAAGTGTCTTAAATCCAAAATAA 6014982 >seq2 Length=16759152 Score = 637 bits (706), Expect = 4e-178 Identities = 1269/1853 (68%), Gaps = 51/1853 (3%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| | ||||||| || |||||| || | ||| ||||| | |||||||||||| ||| Sbjct 8586501 TCAACACTAAATTTTACAGCATTTGAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTT 8586442 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCAT---ACTGGTCAGTTTTGCGTATGTAGGA 36906 |||| || | ||||||| ||||||||||| ||| || | | | || || || Sbjct 8586441 TTTAAGCCACGTTTCCATCCATAAAAATGCATTGAACTA--CA-TATACCATAAGTTGGT 8586385 Query 36907 TTATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCC 36966 ||| || ||| | | | ||||||| |||||| ||||| | || | || || ||| Sbjct 8586384 TTACTTAGATAAAGACTAAGTGATTGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCC 8586325 Query 36967 ATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTA 37026 ||| | | ||| |||||| || || ||||| || |||||||| | || || || | Sbjct 8586324 ATTCCAATAATGTCTTTTTGTGAAATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCT 8586265 Query 37027 TCTGGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATG 37083 | ||| | ||| || || |||||| || ||||||| | | ||| |||| || Sbjct 8586264 TTTGGAATATCAGGTATATTTTGAATGGATCCATTATTTTCAATTATTTTATTGAGTAAT 8586205 Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 | | |||||| ||||| | |||| || | | || || | ||||||||| ||| Sbjct 8586204 CCTTCATTCCAAATATTAAGAGAAATTAAATCACGTAGAAGATGAGTATTTACAACTTGA 8586145 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 |||||||||||||| |||| |||||||||||||| ||||||||||||||| || ||| Sbjct 8586144 AAATCTCCAGATAAAACTCGCCTTGTATATATATTAGAAGTATATGGTTCAATAGATTCA 8586085 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 || || | | ||||||||||||||||| ||||||||||| || |||| | ||| Sbjct 8586084 TTGTTTCCAAGAATTTGAGATGTAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTG 8586025 Query 37264 CTCAATCCATGT-GTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG 37322 | | ||| |||| | |||| ||| | | || ||| ||||||||||| |||| Sbjct 8586024 CGAAGACCAAAACGTATAATTTCTTGCTTTAAAAT-ATCCCATTCCCATAAATCACTTGG 8585966 Query 37323 GTT--CTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATAT 37380 | | || |||||||||||| || ||||| ||||| ||||||||||| || || Sbjct 8585965 AATAACATT--CCACATATCATACTGAAGAATTCCTTTGGATGCTGGAGAATCTTTGAAT 8585908 Query 37381 GTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATAT 37440 || |||||| ||| || | || | | ||| || || ||| ||||| ||| ||| Sbjct 8585907 GTTTCATAACATCCATACTTCTTTGACAATTCACAGGAAGCTTCAAGTGCACCATGATAA 8585848 Query 37441 ATTGTTTCGAAAATTTGTATATTTAATAT-TTTTGCTTCTTCGCTAT-CGAATGCATAGC 37498 || ||||| ||||||| |||| |||| || ||| ||||| | | || ||| | ||| | Sbjct 8585847 ATAGTTTCAAAAATTTTTATA-TTAAGATCTTTAGCTTC-TGGTGATGTGAAAGGATACC 8585790 Query 37499 CCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCT 37558 || | | ||| |||||| | || |||||||| || || || || | ||| || Sbjct 8585789 TCATAAGCAAAAATGTATCAGCAAGTCCTTGAACACCAATTCCAATTGGACGATGCTTAA 8585730 Query 37559 TATTAGATCTAGACGA--TTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAG 37616 ||| || || |||| |||| | ||||||| |||| ||||| || |||||||||| Sbjct 8585729 GATTTGA--TAAACGAGCTTCTTCTAGTGGATAAAAATTAATATCAATAATTTTATTTAA 8585672 Query 37617 ATTTTTAACTAGTATTTTCGTAATTATTCTCAA-CTTGTCGAA--CATAAATACGTTATT 37673 |||| | || ||||| || | || | || | | | || || | || ||| || Sbjct 8585671 ATTTCTTGTTACAATTTTTGTCA-CATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTT 8585613 Query 37674 ATT----------AACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTT 37723 || |||||| || | | | ||| ||| ||| |||||| |||||||||| Sbjct 8585612 TTTCTTTTATAACAACAAACATATTAAGTGCAATTGATGCTAAATTACAAACAGCAACTT 8585553 Query 37724 CATCTTCG-TTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCC 37782 | ||| | || | |||| ||||| || ||||| ||||| ||||||| ||||| Sbjct 8585552 C-GCTTGGAGAACAATATTGAATAATTTCAGTACATAGATTTGAACATCTAATCGTTCCT 8585494 Query 37783 AAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCT 37842 ||||| |||||| ||| ||||||| ||||||||| | ||||| || | || Sbjct 8585493 AAATTTTGTTGATTACTTTTACGATTACAATGATCTTTATAAACCATATATGGAATACCA 8585434 Query 37843 TGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT- 37901 ||| || |||| || ||| | ||| | | ||| ||||| | | ||||| Sbjct 8585433 GTTTCAATCTGAGATTCACAAATTTTCTGCCAAACAAATCTAGCTTTTA--TTTGCTTTC 8585376 Query 37902 ---AAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATAC 37958 | ||||||| | |||| |||| ||||| || || | |||| || || | || Sbjct 8585375 GGAACCTTTTTTCAT--TTTCATATTTAATATA-AAGTTCATCAAATTTATCACCAAAAC 8585319 Query 37959 A--TCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCT 38016 | | || | ||||||||||| | |||||||||| ||||| | ||| | ||| Sbjct 8585318 AATTATCA-AGACCTGGACATTCATAAGGACACATTAATGACCAATGAAGATCCTGTTCA 8585260 Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT 38076 || |||| |||||||||||| || ||||| | | || ||||||||| | ||| | Sbjct 8585259 ACACGTTTCATAAATAAATCTGGAACCCAAAGTCCATAAAATAAATCACGAGCTCTTGCT 8585200 Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGT 38136 ||||| ||| || |||||||| || ||| || | ||||||||| ||||||||| Sbjct 8585199 TCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAAATTCCATTATATCAGCATGCCATGGT 8585140 Query 38137 TCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACT 38196 || | || || | | ||| || |||| ||||| ||| ||||||| || ||| | | | Sbjct 8585139 TCCAAGTAGATTGCAAATGCCCCAGGTCGTTTATTACCACCCTGATCAACATAACGAGCA 8585080 Query 38197 GTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGAT 38256 || ||||||| | | |||||| |||| || |||||| ||| || ||| | || | Sbjct 8585079 GTACTATTATAAACACGTAACATTGGTATTAAACCATTTGATGATCCATTTGTTCCTGCA 8585020 Query 38257 ATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTT 38316 ||| | || || ||| || || | || ||||| ||||| || ||| |||| Sbjct 8585019 ATAAATGTTCCAGAAGCACGAATTCCAGAGATACTTAATCCAATTCCTCCGGCAGATTTT 8584960 Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATT 38376 || |||| ||| |||||||| || || ||| | || ||||| ||| ||||| ||| Sbjct 8584959 GAAATTATAGCACATTGTTTCAAAGTGTCATAAATTCCTTCAATAGAATCATCAGCCATT 8584900 Query 38377 GGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGA 38436 | || || |||||| || | ||| | | |||||| || ||||||||||| || Sbjct 8584899 GTTAATAAAAAACATGACGATAATTGTGCACGAGAAGTTCCTGCATTAAATAATGTTGGG 8584840 Query 38437 GATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATA 38496 || ||||| || |||||||||| |||| ||| |||||| || || || | | ||| Sbjct 8584839 GAAGCATGAATAAACCATTTTTTAGACATATATAAATATGTCTCAATAGCAGAAGCAATA 8584780 Query 38497 TCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATT 38556 || | | ||||| ||| || ||| | ||||| ||||| ||| |||||||| | ||| Sbjct 8584779 TCTTCTCTATGAATTGCTATAGCTACTCGCATTAACATATATTGAGGTCTTTCCACAATT 8584720 Query 38557 TTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609 |||| ||| | | | || ||| ||| ||||| |||| | | ||||||||| Sbjct 8584719 TTATCATTGATTCTTAATAAATATGATCGTTCTAGTGTTCTAAATCCAAAATA 8584667 Score = 282 bits (312), Expect = 4e-71 Identities = 516/751 (69%), Gaps = 10/751 (1%) Strand=Plus/Minus Query 11314 TTCTTTATTTGTAAACA---CCCCCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAA 11370 ||||| || |||| ||| | || | || ||||||||| |||| | || || || Sbjct 14764767 TTCTTCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAA 14764708 Query 11371 ATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAA 11430 ||| || || || || | ||| |||| ||||||| ||| || || | ||||| | Sbjct 14764707 ATTTGTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATA 14764648 Query 11431 GACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGA 11490 | |||| |||| | || || || || || || |||| ||||| | | Sbjct 14764647 AAGTTTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTACA 14764588 Query 11491 CATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTT 11550 |||||||| | ||||| || || | ||| || |||| |||| |||| | | ||||| Sbjct 14764587 CATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTT 14764528 Query 11551 TTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAA 11610 ||| |||| ||| |||| | || || ||||| ||| | ||||||| ||| Sbjct 14764527 TTCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTT 14764470 Query 11611 TAAATGTT--TAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATT 11668 | || || ||||||| | || || ||||||| ||||| || || ||||| || Sbjct 14764469 TCAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATC 14764410 Query 11669 AGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCA 11728 | |||||| ||| ||| ||||| |||||||| || ||||| || | ||||||||| | | Sbjct 14764409 AATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAA 14764350 Query 11729 GCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCA 11788 |||||||||||||||||||| || || || ||||||||||| || | |||| ||||||| Sbjct 14764349 GCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCA 14764290 Query 11789 TA--TA-CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCAT 11845 | || | || || || |||||| || |||||||||||||| ||| | | || Sbjct 14764289 AAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAAT 14764230 Query 11846 TCCATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTA 11905 | |||| ||| ||||| | | |||| |||| ||| || | || ||| || Sbjct 14764229 GGAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTT 14764170 Query 11906 TCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAG 11965 || || | | |||||| || |||||||||||||| || ||||| || |||||| Sbjct 14764169 TCGATAAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCATAG 14764110 Query 11966 AAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTT 12025 || | |||||||| | | || || || | ||||||| || | ||||||||||| Sbjct 14764109 AAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCATTA 14764050 Query 12026 ACAATACCATCACTAGATGCAAAAAATGCTA 12056 |||||||||||| || ||||| || |||| Sbjct 14764049 ACAATACCATCAGAAGCGGCAAAGAAAGCTA 14764019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524009364400