Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 654 0.0
seq2 596 2e-165
>seq1
Length=11693564
Score = 654 bits (724), Expect = 0.0
Identities = 1443/2142 (67%), Gaps = 65/2142 (3%)
Strand=Plus/Plus
Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919
|| ||||| || | || || |||||||| ||||||| || | |||| | | ||||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 64920 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 64976
||||| ||| | ||| ||| || | || | ||| | ||| | |||||
Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290
Query 64977 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 65036
|||||| || || || || | || |||||||| | || || ||||| | |||
Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350
Query 65037 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 65093
||||||| ||||||||||| | ||||||| ||||| | | || || || ||
Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410
Query 65094 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 65153
|||||| || || || ||| |||| | | ||| ||| |||||| || || ||
Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470
Query 65154 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 65213
||| || |||| ||||| ||||| || | ||| || ||||| || | || | | ||||
Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530
Query 65214 TAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 65273
||||| ||| ||||| ||||| | ||| ||||||||||| | ||| || ||||||||
Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590
Query 65274 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 65331
||||| ||||| || || | |||||| |||||| | ||| ||||| || || |
Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648
Query 65332 CTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTA 65391
|||||| || |||||||| ||| | ||| ||| || ||| |
Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708
Query 65392 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 65447
||||||| || ||||| | |||| ||||||| || || || || || |||
Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764
Query 65448 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 65507
|||| |||||| || || ||||| || | ||||| ||||| || ||| ||||||
Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824
Query 65508 AGATCTTGTGCTTCCAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 65565
|| |||| || | ||| | | ||| |||||| | || ||||| || || ||||
Sbjct 6013825 AGTTCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTA 6013882
Query 65566 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 65625
| || |||||||||||||| || || | |||||| |||| || || ||||| || |
Sbjct 6013883 AACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGA 6013942
Query 65626 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCA 65682
|||||||||||| | ||| ||||||||||| | |||| | | |||| || || |
Sbjct 6013943 CAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAA-A 6013999
Query 65683 CATCCTTCAGTT-TGAGAAAATCAAATC--GCT---CATCTA----TT--ACAAACATGT 65730
|| | | |||| | |||| | ||| | | | |||||| || ||||| | |
Sbjct 6014000 CAACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTAT 6014059
Query 65731 TCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTA 65790
| | |||| |||| | |||||||| || || || |||| | | ||||| | |
Sbjct 6014060 TAAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAA 6014119
Query 65791 TCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 65850
| ||||| || | ||| ||| || |||||||| | ||||||||||||||| || |
Sbjct 6014120 TTTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGAT 6014179
Query 65851 TACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 65910
|||| ||| || |||| || | || || || |||||||| ||| ||| ||||
Sbjct 6014180 TACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCT 6014239
Query 65911 CTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC--TTTCGTA-TA 65967
|| ||| | |||| ||||||||| | ||| | | | |||||| |||| || |
Sbjct 6014240 TTTGCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTT 6014297
Query 65968 GTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCG 66027
||| ||| ||| || || | || |||||| || || | |||||||||||| | |
Sbjct 6014298 GTG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGG 6014356
Query 66028 GACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCC 66087
| |||||||| ||||| | ||| | || || ||||||||||| | |||||||||||
Sbjct 6014357 GGCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCC 6014416
Query 66088 AAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT 66147
||||| | ||||||||| | | ||| | ||| || |||||||| || |||||||
Sbjct 6014417 AAAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGAT 6014476
Query 66148 CGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 66207
| | || | | ||| ||| |||||| ||||| | ||||| || | ||||||| |
Sbjct 6014477 CCAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTC 6014536
Query 66208 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 66267
||| ||||| || || || | || | || || || ||| |||||||||||||||| |
Sbjct 6014537 TTTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTA 6014596
Query 66268 TAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTAC 66327
| | ||||| ||||||||||| || || ||| | ||| | ||||||||| |
Sbjct 6014597 TTAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAAT 6014656
Query 66328 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 66387
|| | || || || || || ||| || |||||||| ||| |||| | ||||
Sbjct 6014657 GAACATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTAT 6014716
Query 66388 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 66447
|||| || || || || |||||| ||| | |||| ||||| ||||| ||
Sbjct 6014717 CATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTG 6014776
Query 66448 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-A 66506
|||| || ||||| ||||||||||| || ||||| || || |||||||| || | ||| |
Sbjct 6014777 GACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACA 6014836
Query 66507 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACA 66566
||| | || || |||||| | || | ||||| ||||||||| ||||| |||
Sbjct 6014837 TATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACA 6014895
Query 66567 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGAT 66626
|||||||| | || || ||||||||| | | || |||||||| || | || ||
Sbjct 6014896 CGCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAA 6014955
Query 66627 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 66686
||| | || ||||| |||||||| | | ||| |||| | |||| ||| |
Sbjct 6014956 CGTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCA 6015015
Query 66687 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT------ACTTGAAATA 66740
|| || |||||||| || ||| || | | | || | | |||| ||
Sbjct 6015016 GAATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTT---ATC 6015069
Query 66741 ATCGGAGAATGTTTCCCATTTTTAGGATTGAC-ATAGTTGAATAAATCCTCCATCACTTC 66799
|| || |||| | | | | || || |||| |||||| |||| || ||| ||||
Sbjct 6015070 ATTGGCAAATG-TACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTC 6015128
Query 66800 ACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAAT 66859
||| ||| ||||||| ||| || | ||| || || || ||||| || |||| ||
Sbjct 6015129 TGAAAAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTAT 6015188
Query 66860 GGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAA 66919
|||||||| ||||| ||| || | | || | | ||| || || | | | || ||
Sbjct 6015189 AGCATAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAA 6015248
Query 66920 TTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 66961
||| || |||| ||| |||||||| | |||||||||||| ||
Sbjct 6015249 TTCAACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
Score = 86.0 bits (94), Expect = 8e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 31225 TCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTA 31284
|| || || | |||||||||| ||||||||||||| || || || | |||||||||| |
Sbjct 581502 TCTTTAACTTCAGTTAATGATTTCCAATCCATATTTGCACTACCAATATAAATATGTTTT 581561
Query 31285 TTATCAGATATCCAAAATTTTGTATGAAGAACTCC 31319
| |||| ||||||||||||||||| | ||| ||
Sbjct 581562 TGATCAACAATCCAAAATTTTGTATGTAAAACACC 581596
>seq2
Length=16759152
Score = 596 bits (660), Expect = 2e-165
Identities = 1380/2055 (67%), Gaps = 55/2055 (3%)
Strand=Plus/Minus
Query 64857 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 64916
|| || ||||| || | || ||| |||||||||||||||| || | ||||||| |||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 64917 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 64973
|||||||| ||| || | |||| | || | || || | | | | |||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 64974 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 65032
||| |||||| || || | |||| || ||||||||| || || ||||||| |||
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302
Query 65033 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 65089
||||||||| | ||||||||||| | | || |||| ||||| | | |||| ||
Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242
Query 65090 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 65148
|||||||||| || | | || || |||| | ||| | |||||||| | ||
Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183
Query 65149 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 65208
||||| | | || ||||| | ||| || |||||||| |||||||| || |||| ||
Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123
Query 65209 GAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAG 65268
|| || |||||| ||||| ||||| | ||| ||||| ||||| | |||||||| |
Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063
Query 65269 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 65328
| ||||| || ||||| || || | ||||| ||| | |||||| | | | ||||
Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003
Query 65329 TATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 65388
| |||| | ||||| | ||| | ||| || | ||| |
Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943
Query 65389 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 65447
| ||||| || || || | | ||| | | |||| || || ||| | |||||
Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884
Query 65448 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 65507
| | |||||| || || | |||||| | |||||| ||||| || || || ||||
Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824
Query 65508 AGATCTTGTGCTTCCAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 65566
||||||| ||||| | | | | ||| ||||| | | || | ||| | || || |
Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765
Query 65567 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 65626
||||||||||||||| || || || | ||| | ||| || | ||||||| |
Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705
Query 65627 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 65683
|||||| |||||||||| ||||||||||| | |||||| |||||| |||| | ||
Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648
Query 65684 ATCCTTCAGTTTGAGAAAATCAAATCGC---------TCATCTATTACAA---ACATGTT 65731
||| | || | ||| |||||| || | ||| |||| |||| ||
Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588
Query 65732 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 65791
| ||||| ||||| | ||||||||| || || || | | | |||||| || ||
Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528
Query 65792 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 65851
||||| || ||||| ||| | || ||||||||||||||||||||||| || ||
Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468
Query 65852 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 65911
||| ||| ||||||| || ||||| |||||||||||||||||||||| |||
Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408
Query 65912 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCTTTTCTCTTTCGTATAGT 65969
| ||| || | || ||| |||||| | ||| | | || ||||| |||| |||
Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350
Query 65970 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 66029
|||| | | || || | || || || ||| || | || |||||||||| |||
Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290
Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089
||||| || ||||| | || | | || ||||||||||| | ||| |||| ||||
Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230
Query 66090 AGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 66149
|| | ||||||||| | | ||| ||| || ||||| || ||| | | |||
Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170
Query 66150 AGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 66209
| || |||| |||||| |||||| ||||||||||| || || | | ||||| |||
Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110
Query 66210 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 66269
|| || || |||||||| | || | ||| || |||||||||| | |||||||| ||
Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050
Query 66270 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTA 66329
| |||||| |||| ||||| || || | ||| | ||||| |||||||| |
Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990
Query 66330 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 66389
|| || || ||||| || || ||| || |||| || ||| |||| || || |||
Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930
Query 66390 TAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 66448
|| || || || ||| |||||| || |||||| || |||||| || | |||
Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871
Query 66449 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 66508
|||| |||||| ||||||||||| || || ||||| || |||||||||||| ||| |
Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812
Query 66509 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 66567
|| || || ||||||||||| || | ||||| | ||||||| ||| || || |
Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752
Query 66568 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 66627
|||||||||| | ||||||||||| || || || | || ||| | || || || |||
Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692
Query 66628 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 66686
||| | ||| |||| |||||||| || || |||| ||| ||| | ||||||
Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633
Query 66687 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT--GAAATAATCG 66744
|||| ||||| || ||| | || || | ||| || | ||| | || | |
Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575
Query 66745 GAGAATGTTTCCCATT---TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCAC 66801
|| |||||| || | ||| | || ||| || ||||||| | ||| ||||||
Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518
Query 66802 TAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGG 66861
|||| ||||| |||| ||| || | ||||| | ||| || | ||| |||| |
Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458
Query 66862 CATAATCCGGATGTT 66876
||||||| |||||||
Sbjct 8584457 CATAATCAGGATGTT 8584443
Score = 273 bits (302), Expect = 3e-68
Identities = 528/772 (68%), Gaps = 23/772 (3%)
Strand=Plus/Minus
Query 35843 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 35902
|| ||| ||||||||| || | ||| || |||||| || ||| || || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 35903 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtt 35962
||||| || || | ||| ||||| |||| ||||| || || || |||||||||||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 35963 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 36022
||| | | | ||| | ||| || || ||| |||| |||||||| || |
Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587
Query 36023 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 36079
||| || | |||||||| || | | ||| |||||||| | ||||| |||| | |
Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527
Query 36080 TCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGT--GGATACA 36137
|||||| || || | | | ||||| | ||| ||||||| ||| | | ||
Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTTTGTTTTCA 14764467
Query 36138 A--TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAAT 36195
| ||| | |||||| | || |||||||| | ||||| ||||| ||||| |||
Sbjct 14764466 AGGTAACT----AAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAAT 14764411
Query 36196 TAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA 36255
||||| |||||| || | ||| ||||| | ||||| || || ||||||||||||||
Sbjct 14764410 CAATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGA 14764351
Query 36256 CGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 36315
|||||||| ||||||||||| || ||||| || || ||||| ||||||| || |||||
Sbjct 14764350 AGCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCC 14764291
Query 36316 ATAACCGGCA---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACA 36372
| || ||| | ||| ||||| || ||||||||| || || ||| | | | |
Sbjct 14764290 AAAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAA 14764231
Query 36373 AGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGT 36432
|| | |||| ||||||||| || | || |||| | | | || | ||| ||
Sbjct 14764230 TGGAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGT 14764171
Query 36433 ATCAATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCC 36489
|| || ||| | |||||| || ||||| ||||| ||||| ||||| || ||
Sbjct 14764170 TTCGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACC 14764114
Query 36490 GTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTC 36549
||||| | | ||||||| ||| || |||||| || |||||| || | ||||| ||
Sbjct 14764113 ATAGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTC 14764054
Query 36550 ATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601
||| || || || ||| || ||||| || || || ||| || ||||||
Sbjct 14764053 ATTAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171689333400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |