Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 >seq2 Length=16759152 Score = 109 bits (120), Expect = 4e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || ||||| ||||||||||| || | |||||||| |||||||| ||||||| |||||| Sbjct 14764306 GCTTTTGCAGCTGTTGAAGGTATCTTCTTTTCTGGTTCATTTGCTTCCATATTTTGGCTG 14764365 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||||||| | |||||||| ||| | |||||| || |||||| | || || Sbjct 14764366 AAGAAACGTGGTTTGATGCCAGGATTGACACATTCCAATGAATTGATTTCAAGAGATGAG 14764425 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 || ||||| |||| || || || | ||||||| | | | ||||||||| Sbjct 14764426 GGATTACACCGTGATTTCGCCTGCCTTATGTTTAGTTACCTTGAAAACAAACC 14764478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233013884405