Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 729 0.0 seq2 661 0.0 >seq1 Length=11693564 Score = 729 bits (808), Expect = 0.0 Identities = 1456/2132 (68%), Gaps = 45/2132 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || ||||| || | || || |||||||| ||||||| || | |||| | | ||| Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233 Query 78799 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 78855 ||||| ||| | ||| ||| || | || | ||| | ||| | ||||| Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290 Query 78856 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 78915 |||||| || || || || | || |||||||| | || || ||||| | ||| Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350 Query 78916 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 78972 ||||||| ||||||||||| | ||||||| ||||| | | || || || || Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410 Query 78973 GATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 79032 |||||| || || || ||| |||| | | ||||||| |||||| || || || Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470 Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092 ||| || |||| ||||| ||||| || | ||| || ||||| || | || | | |||| Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530 Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152 ||||| ||| ||||||||||| | |||||||||||||| | ||| || |||||||| Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590 Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTAT 79210 || |||||||| || || | |||||| |||||| | ||| ||| | || || | Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648 Query 79211 CTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTA 79270 |||||| || |||||||||||| | |||| || |||||||| | |||||||| | Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708 Query 79271 GAATACCGTTAC-TAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCT 79329 ||||||| || || | | ||||| ||||| |||||||| || || ||| ||| Sbjct 6013709 GAATACCTTTTGATACTGGA-GATCCATCATATGTCTCATAAGGACCATCACGTTCAGCT 6013767 Query 79330 AATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGA 79389 | |||||| || || |||||||| | ||||| ||||| |||||| |||||| || Sbjct 6013768 ACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGT 6013827 Query 79390 TCTTGTGCTTCTAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATC 79447 |||| || | ||| | | ||| |||||| | || ||||| || || ||||| | Sbjct 6013828 TCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTAAAC 6013885 Query 79448 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAG 79507 | |||||||||||||| || || | |||||| |||| || || ||||| || | || Sbjct 6013886 CCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAG 6013945 Query 79508 GATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCT 79567 |||||||||| | ||| ||||||||||| | ||| | || | ||| ||| | | Sbjct 6013946 GATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACAT 6014005 Query 79568 TTAGTT-TGAGAAAATCAAATC--GT---CCATCTA----TT--ACAAACATGTTCAACG 79615 |||| | |||| | ||| | || ||||||| || ||||| | || | | Sbjct 6014006 GAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAG 6014065 Query 79616 CGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAG 79675 | | |||| | |||||||| || || || |||| | | ||||| | ||||||| Sbjct 6014066 CAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAATTTCAG 6014125 Query 79676 TGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 79735 | || | || ||| ||||||||||| | ||||||||||||||| || ||||| Sbjct 6014126 TACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAAT 6014185 Query 79736 CATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 79795 ||| || |||| || | || || || |||||||| ||| ||| |||| || || Sbjct 6014186 GATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCC 6014245 Query 79796 AGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC--TTTCGTA-TTGTGTAT 79852 | | |||| ||||||||| | || | | | |||||| |||| || ||||| || Sbjct 6014246 AAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-AT 6014302 Query 79853 ATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACA 79912 ||||| || || | || |||||| ||| || | |||||||||||||| || |||| Sbjct 6014303 ATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACA 6014362 Query 79913 TCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972 |||| ||||| | || | || ||| ||||||||||| | |||||||||||||||| Sbjct 6014363 TCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGAC 6014422 Query 79973 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 80032 | ||||| ||| | | ||| | || || |||||||| || |||||||| | | Sbjct 6014423 CATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAA 6014482 Query 80033 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGT 80092 | | | ||| |||| |||||| ||||| | ||||| || | |||| |||| ||| | Sbjct 6014483 ATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTAT 6014542 Query 80093 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 80152 |||| || || || | || | || || || ||| |||||||||||||||| || | | Sbjct 6014543 TTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATC 6014602 Query 80153 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 80212 |||| ||||||||||| || || ||| | ||| | ||||||||| | || Sbjct 6014603 CATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAACAT 6014662 Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272 | || || || || || ||| || |||||||| ||| |||| | |||||||| | Sbjct 6014663 TCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATATA 6014722 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | || || || ||||||| ||| | |||| ||||| ||||| || |||| | Sbjct 6014723 TACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGGACGTC 6014782 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGA 80391 | ||||| ||||||||||| || ||||| || || |||||||| || | ||||| ||| Sbjct 6014783 TGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATATAG- 6014841 Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451 | || || |||||| | || | ||||| ||||||||| || || ||||||||| Sbjct 6014842 TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGCATT 6014901 Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511 || | || || ||||||||| | | || ||||||||| || | || || ||| Sbjct 6014902 AATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGTTCA 6014961 Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571 | || ||||| |||||||| | | ||| |||| | |||| ||| | || || Sbjct 6014962 AGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAATTA 6015021 Query 80572 AGTTTATCCTTATATTTGTTAACTACATCCATG-GTGATACTTGA--AATAATCGGAGAA 80628 |||||||| || ||| || | | | || | | | | | | || || || || Sbjct 6015022 AGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTTATCATTGGCAAA 6015078 Query 80629 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 80688 ||| || || || || | |||||| |||| || ||| |||| ||| | Sbjct 6015079 TGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAAAACTT 6015138 Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || ||||||| || || | ||| || || || ||||| || |||| || ||||||||| Sbjct 6015139 TTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCATAATCT 6015198 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| ||| || | | || | | ||| || || | | | || ||||| || ||| Sbjct 6015199 GGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAACTGTT 6015258 Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTT 80840 | ||| |||||||| | |||||||||||| || Sbjct 6015259 GATACACCATTATACAATCCTTGGATAACTTT 6015290 >seq2 Length=16759152 Score = 661 bits (732), Expect = 0.0 Identities = 1394/2052 (68%), Gaps = 49/2052 (2%) Strand=Plus/Minus Query 78736 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAG 78795 || || ||||| || | || ||| |||||||||||||||| || | ||||||| || Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 78796 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 78852 |||||||| ||| || | |||| | || | || || | | | | ||| Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361 Query 78853 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 78911 ||| |||||| || || | |||| || ||||||||| || || ||||||| ||| Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302 Query 78912 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 78968 ||||||||| | ||||||||||| | | || |||| ||||| | | |||| || Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242 Query 78969 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCTTCATTCCATAATTTTCTCT 79027 |||||||||| || | | || || |||| | ||| |||||||||| | || Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183 Query 79028 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 79087 ||||| | | || ||||| | ||| || |||||||| |||||||| || |||| || Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123 Query 79088 GAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAG 79147 || || |||||| ||||||||||| | |||||||| ||||| | |||||||| | Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063 Query 79148 TTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTT 79207 | ||||| || ||||| || || | ||||| ||| | |||||| | | | |||| Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003 Query 79208 TATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATT 79267 | |||| | ||||| ||||| | |||| || | ||||||||| | |||||| | Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943 Query 79268 GTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGG 79327 | ||||| || || || || || || ||||||||||| ||| | ||| | | Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTTTG 8585883 Query 79328 CTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGA 79387 |||||||| || || | ||| || | |||||| ||||| ||||| || |||| | Sbjct 8585882 ACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTAA 8585823 Query 79388 GATCTTGTGCTTCTAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 79446 |||||| |||||| | | | | ||| ||||| | | || | ||| | || || | | Sbjct 8585822 GATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAGT 8585764 Query 79447 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 79506 |||||||||||||| || || || | ||| | ||| || | ||||||| | Sbjct 8585763 CCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAGT 8585704 Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCC 79566 |||||| |||||||||| ||||||||||| | ||| || || | ||| |||||| Sbjct 8585703 GGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATCA 8585644 Query 79567 TTTAGTTTGAGAAAATCAAATCG---------TCCATCTATTACAA---ACATGTTCAAC 79614 | || | ||| |||||| | | | ||| |||| |||| || | Sbjct 8585643 TGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAGT 8585584 Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 || | ||||| | ||||||||| || || || | | | |||||| || |||||| Sbjct 8585583 GCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTCA 8585524 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 || || || || ||| |||| ||||||||||||||||||||||| || ||||| Sbjct 8585523 GTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACAA 8585464 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 ||| ||||||| || | ||| |||||||||||||||||||||| ||| | | Sbjct 8585463 TGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTGC 8585404 Query 79795 CAGACGACTCGAGCCTTTATTATAGACTT--GTATCTCTTTTCTCTTTCGTATTGTGTAT 79852 || || | || ||| |||||| | || | | || ||||| |||| |||| ||| Sbjct 8585403 CAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTAATAT 8585346 Query 79853 ATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACA 79912 | | | || || | || || || || || | || |||||||| | |||||||| Sbjct 8585345 AAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACA 8585286 Query 79913 TCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972 | || ||||| | ||| | | || ||||||||||| | ||| |||| |||||| Sbjct 8585285 TTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTC 8585226 Query 79973 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT-CCTGTATTCTTTTTAAGATCGAGG 80031 | ||||| ||| | | ||| |||| || | ||||| || ||| | | ||| | Sbjct 8585225 CATAAAATAAATCACGAGCTCT-TGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAA 8585167 Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091 || |||| ||||||| |||||| ||||||||||| || || | | || |||||||| Sbjct 8585166 AATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTA 8585107 Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151 || || |||||||| | || | ||| || |||||||||| | |||||||| || | | Sbjct 8585106 TTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAA 8585047 Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 80211 ||||| |||| ||||| || || | ||| | ||||| |||||||| | || Sbjct 8585046 CCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATA 8584987 Query 80212 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 80271 || || ||||| || || ||| || |||| || ||| |||| || || ||||| Sbjct 8584986 CTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAA 8584927 Query 80272 ATGCCCTCTATGCTATCATCAATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 80330 || || || || ||||||| || |||||| || |||||| || | ||| ||| Sbjct 8584926 ATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGCACG 8584868 Query 80331 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 80390 | |||||| ||||||||||| || || ||||| || |||||||||||| ||||| || Sbjct 8584867 AGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TAT 8584809 Query 80391 AT-TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCA 80449 || || ||||||||||| || | ||||| | ||||||| ||| || || |||| Sbjct 8584808 ATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTCGCA 8584749 Query 80450 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTT 80509 ||||||| | ||||||||||| || || || | ||| ||| | || || || ||| || Sbjct 8584748 TTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTT 8584689 Query 80510 CCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 80568 | | ||| |||| |||||||| || || |||| ||| ||| | |||||| ||| Sbjct 8584688 CTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAG 8584630 Query 80569 TTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT--GAAATAATCGGAG 80626 | ||||| || ||| | || || | ||| | | ||| | || | ||| Sbjct 8584629 TCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAGGAC 8584572 Query 80627 AATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 80683 |||||| || | ||| | || ||| || ||||||| | ||| |||||| || Sbjct 8584571 AATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAGAAA 8584515 Query 80684 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCAT 80743 || ||||| |||| || || | ||||| | ||| || | || ||||| | ||| Sbjct 8584514 ATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTTCAT 8584455 Query 80744 AATCTGGATGTT 80755 |||| ||||||| Sbjct 8584454 AATCAGGATGTT 8584443 Score = 269 bits (298), Expect = 4e-67 Identities = 526/770 (68%), Gaps = 19/770 (2%) Strand=Plus/Minus Query 49645 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 49704 || ||| ||||||||| || | ||| || |||||| || ||| || || ||||| Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704 Query 49705 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 49764 |||||||| || | ||| ||||| |||| |||||||| || || |||||||||||| | Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644 Query 49765 tttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATC 49824 ||| | | | ||| | ||| || || ||| |||| |||||||| || | Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587 Query 49825 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 49881 ||| || | |||||||| || | | ||| |||||||| | ||||| |||| | | Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527 Query 49882 TCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT 49941 ||||| || |||| | | ||||| | | | ||||||| ||| || | Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTTT 14764469 Query 49942 AAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 49999 || || ||||||| | || |||||||| | ||| | ||||| ||||| ||| | Sbjct 14764468 CAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCA 14764409 Query 50000 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACG 50059 ||| |||||| || | ||| ||||| | ||||| || || |||||||||||||| | Sbjct 14764408 ATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAG 14764349 Query 50060 CAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCAT 50119 ||||||| |||||||||||||| ||||| || || ||||| |||| || || |||||| Sbjct 14764348 CAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAA 14764289 Query 50120 AACTGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 50176 || | || | ||| ||||| || ||||||||| || || ||| | | | | | Sbjct 14764288 AAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATG 14764229 Query 50177 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 50236 | | | |||| |||||||| || | || |||| | | | || | ||| || | Sbjct 14764228 GAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTT 14764169 Query 50237 CGATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 50293 |||| ||| | |||||| || ||||| ||||| ||||| || || || || | Sbjct 14764168 CGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCAT 14764112 Query 50294 AGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCAT 50353 |||| | | ||||||| ||| || |||||| || |||||| || | ||||| |||| Sbjct 14764111 AGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCAT 14764052 Query 50354 TCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 | || || || ||| || ||||| || || || ||| || |||||| Sbjct 14764051 TAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267587921400