Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 729 0.0
seq2 661 0.0
>seq1
Length=11693564
Score = 729 bits (808), Expect = 0.0
Identities = 1456/2132 (68%), Gaps = 45/2132 (2%)
Strand=Plus/Plus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
|| ||||| || | || || |||||||| ||||||| || | |||| | | |||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 78799 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 78855
||||| ||| | ||| ||| || | || | ||| | ||| | |||||
Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290
Query 78856 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 78915
|||||| || || || || | || |||||||| | || || ||||| | |||
Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350
Query 78916 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 78972
||||||| ||||||||||| | ||||||| ||||| | | || || || ||
Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410
Query 78973 GATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 79032
|||||| || || || ||| |||| | | ||||||| |||||| || || ||
Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470
Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092
||| || |||| ||||| ||||| || | ||| || ||||| || | || | | ||||
Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530
Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152
||||| ||| ||||||||||| | |||||||||||||| | ||| || ||||||||
Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590
Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTAT 79210
|| |||||||| || || | |||||| |||||| | ||| ||| | || || |
Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648
Query 79211 CTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTA 79270
|||||| || |||||||||||| | |||| || |||||||| | |||||||| |
Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708
Query 79271 GAATACCGTTAC-TAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCT 79329
||||||| || || | | ||||| ||||| |||||||| || || ||| |||
Sbjct 6013709 GAATACCTTTTGATACTGGA-GATCCATCATATGTCTCATAAGGACCATCACGTTCAGCT 6013767
Query 79330 AATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGA 79389
| |||||| || || |||||||| | ||||| ||||| |||||| |||||| ||
Sbjct 6013768 ACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGT 6013827
Query 79390 TCTTGTGCTTCTAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATC 79447
|||| || | ||| | | ||| |||||| | || ||||| || || ||||| |
Sbjct 6013828 TCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTAAAC 6013885
Query 79448 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAG 79507
| |||||||||||||| || || | |||||| |||| || || ||||| || | ||
Sbjct 6013886 CCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAG 6013945
Query 79508 GATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCT 79567
|||||||||| | ||| ||||||||||| | ||| | || | ||| ||| | |
Sbjct 6013946 GATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACAT 6014005
Query 79568 TTAGTT-TGAGAAAATCAAATC--GT---CCATCTA----TT--ACAAACATGTTCAACG 79615
|||| | |||| | ||| | || ||||||| || ||||| | || | |
Sbjct 6014006 GAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAG 6014065
Query 79616 CGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAG 79675
| | |||| | |||||||| || || || |||| | | ||||| | |||||||
Sbjct 6014066 CAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAATTTCAG 6014125
Query 79676 TGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 79735
| || | || ||| ||||||||||| | ||||||||||||||| || |||||
Sbjct 6014126 TACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAAT 6014185
Query 79736 CATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 79795
||| || |||| || | || || || |||||||| ||| ||| |||| || ||
Sbjct 6014186 GATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCC 6014245
Query 79796 AGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC--TTTCGTA-TTGTGTAT 79852
| | |||| ||||||||| | || | | | |||||| |||| || ||||| ||
Sbjct 6014246 AAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-AT 6014302
Query 79853 ATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACA 79912
||||| || || | || |||||| ||| || | |||||||||||||| || ||||
Sbjct 6014303 ATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACA 6014362
Query 79913 TCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972
|||| ||||| | || | || ||| ||||||||||| | ||||||||||||||||
Sbjct 6014363 TCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGAC 6014422
Query 79973 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 80032
| ||||| ||| | | ||| | || || |||||||| || |||||||| | |
Sbjct 6014423 CATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAA 6014482
Query 80033 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGT 80092
| | | ||| |||| |||||| ||||| | ||||| || | |||| |||| ||| |
Sbjct 6014483 ATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTAT 6014542
Query 80093 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 80152
|||| || || || | || | || || || ||| |||||||||||||||| || | |
Sbjct 6014543 TTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATC 6014602
Query 80153 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 80212
|||| ||||||||||| || || ||| | ||| | ||||||||| | ||
Sbjct 6014603 CATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAACAT 6014662
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| || || || || || ||| || |||||||| ||| |||| | |||||||| |
Sbjct 6014663 TCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATATA 6014722
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || || ||||||| ||| | |||| ||||| ||||| || |||| |
Sbjct 6014723 TACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGGACGTC 6014782
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGA 80391
| ||||| ||||||||||| || ||||| || || |||||||| || | ||||| |||
Sbjct 6014783 TGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATATAG- 6014841
Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451
| || || |||||| | || | ||||| ||||||||| || || |||||||||
Sbjct 6014842 TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGCATT 6014901
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
|| | || || ||||||||| | | || ||||||||| || | || || |||
Sbjct 6014902 AATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGTTCA 6014961
Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571
| || ||||| |||||||| | | ||| |||| | |||| ||| | || ||
Sbjct 6014962 AGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAATTA 6015021
Query 80572 AGTTTATCCTTATATTTGTTAACTACATCCATG-GTGATACTTGA--AATAATCGGAGAA 80628
|||||||| || ||| || | | | || | | | | | | || || || ||
Sbjct 6015022 AGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTTATCATTGGCAAA 6015078
Query 80629 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 80688
||| || || || || | |||||| |||| || ||| |||| ||| |
Sbjct 6015079 TGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAAAACTT 6015138
Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748
|| ||||||| || || | ||| || || || ||||| || |||| || |||||||||
Sbjct 6015139 TTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCATAATCT 6015198
Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808
||||| ||| || | | || | | ||| || || | | | || ||||| || |||
Sbjct 6015199 GGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAACTGTT 6015258
Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTT 80840
| ||| |||||||| | |||||||||||| ||
Sbjct 6015259 GATACACCATTATACAATCCTTGGATAACTTT 6015290
>seq2
Length=16759152
Score = 661 bits (732), Expect = 0.0
Identities = 1394/2052 (68%), Gaps = 49/2052 (2%)
Strand=Plus/Minus
Query 78736 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAG 78795
|| || ||||| || | || ||| |||||||||||||||| || | ||||||| ||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 78796 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 78852
|||||||| ||| || | |||| | || | || || | | | | |||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 78853 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 78911
||| |||||| || || | |||| || ||||||||| || || ||||||| |||
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302
Query 78912 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 78968
||||||||| | ||||||||||| | | || |||| ||||| | | |||| ||
Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242
Query 78969 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCTTCATTCCATAATTTTCTCT 79027
|||||||||| || | | || || |||| | ||| |||||||||| | ||
Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183
Query 79028 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 79087
||||| | | || ||||| | ||| || |||||||| |||||||| || |||| ||
Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123
Query 79088 GAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAG 79147
|| || |||||| ||||||||||| | |||||||| ||||| | |||||||| |
Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063
Query 79148 TTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTT 79207
| ||||| || ||||| || || | ||||| ||| | |||||| | | | ||||
Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003
Query 79208 TATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATT 79267
| |||| | ||||| ||||| | |||| || | ||||||||| | |||||| |
Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943
Query 79268 GTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGG 79327
| ||||| || || || || || || ||||||||||| ||| | ||| | |
Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTTTG 8585883
Query 79328 CTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGA 79387
|||||||| || || | ||| || | |||||| ||||| ||||| || |||| |
Sbjct 8585882 ACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTAA 8585823
Query 79388 GATCTTGTGCTTCTAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 79446
|||||| |||||| | | | | ||| ||||| | | || | ||| | || || | |
Sbjct 8585822 GATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAGT 8585764
Query 79447 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 79506
|||||||||||||| || || || | ||| | ||| || | ||||||| |
Sbjct 8585763 CCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAGT 8585704
Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCC 79566
|||||| |||||||||| ||||||||||| | ||| || || | ||| ||||||
Sbjct 8585703 GGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATCA 8585644
Query 79567 TTTAGTTTGAGAAAATCAAATCG---------TCCATCTATTACAA---ACATGTTCAAC 79614
| || | ||| |||||| | | | ||| |||| |||| || |
Sbjct 8585643 TGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAGT 8585584
Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674
|| | ||||| | ||||||||| || || || | | | |||||| || ||||||
Sbjct 8585583 GCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTCA 8585524
Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734
|| || || || ||| |||| ||||||||||||||||||||||| || |||||
Sbjct 8585523 GTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACAA 8585464
Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794
||| ||||||| || | ||| |||||||||||||||||||||| ||| | |
Sbjct 8585463 TGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTGC 8585404
Query 79795 CAGACGACTCGAGCCTTTATTATAGACTT--GTATCTCTTTTCTCTTTCGTATTGTGTAT 79852
|| || | || ||| |||||| | || | | || ||||| |||| |||| |||
Sbjct 8585403 CAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTAATAT 8585346
Query 79853 ATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACA 79912
| | | || || | || || || || || | || |||||||| | ||||||||
Sbjct 8585345 AAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACA 8585286
Query 79913 TCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972
| || ||||| | ||| | | || ||||||||||| | ||| |||| ||||||
Sbjct 8585285 TTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTC 8585226
Query 79973 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT-CCTGTATTCTTTTTAAGATCGAGG 80031
| ||||| ||| | | ||| |||| || | ||||| || ||| | | ||| |
Sbjct 8585225 CATAAAATAAATCACGAGCTCT-TGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAA 8585167
Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091
|| |||| ||||||| |||||| ||||||||||| || || | | || ||||||||
Sbjct 8585166 AATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTA 8585107
Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151
|| || |||||||| | || | ||| || |||||||||| | |||||||| || | |
Sbjct 8585106 TTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAA 8585047
Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 80211
||||| |||| ||||| || || | ||| | ||||| |||||||| | ||
Sbjct 8585046 CCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATA 8584987
Query 80212 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 80271
|| || ||||| || || ||| || |||| || ||| |||| || || |||||
Sbjct 8584986 CTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAA 8584927
Query 80272 ATGCCCTCTATGCTATCATCAATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 80330
|| || || || ||||||| || |||||| || |||||| || | ||| |||
Sbjct 8584926 ATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGCACG 8584868
Query 80331 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 80390
| |||||| ||||||||||| || || ||||| || |||||||||||| ||||| ||
Sbjct 8584867 AGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TAT 8584809
Query 80391 AT-TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCA 80449
|| || ||||||||||| || | ||||| | ||||||| ||| || || ||||
Sbjct 8584808 ATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTCGCA 8584749
Query 80450 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTT 80509
||||||| | ||||||||||| || || || | ||| ||| | || || || ||| ||
Sbjct 8584748 TTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTT 8584689
Query 80510 CCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 80568
| | ||| |||| |||||||| || || |||| ||| ||| | |||||| |||
Sbjct 8584688 CTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAG 8584630
Query 80569 TTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT--GAAATAATCGGAG 80626
| ||||| || ||| | || || | ||| | | ||| | || | |||
Sbjct 8584629 TCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAGGAC 8584572
Query 80627 AATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 80683
|||||| || | ||| | || ||| || ||||||| | ||| |||||| ||
Sbjct 8584571 AATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAGAAA 8584515
Query 80684 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCAT 80743
|| ||||| |||| || || | ||||| | ||| || | || ||||| | |||
Sbjct 8584514 ATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTTCAT 8584455
Query 80744 AATCTGGATGTT 80755
|||| |||||||
Sbjct 8584454 AATCAGGATGTT 8584443
Score = 269 bits (298), Expect = 4e-67
Identities = 526/770 (68%), Gaps = 19/770 (2%)
Strand=Plus/Minus
Query 49645 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 49704
|| ||| ||||||||| || | ||| || |||||| || ||| || || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 49705 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 49764
|||||||| || | ||| ||||| |||| |||||||| || || |||||||||||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 49765 tttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATC 49824
||| | | | ||| | ||| || || ||| |||| |||||||| || |
Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587
Query 49825 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 49881
||| || | |||||||| || | | ||| |||||||| | ||||| |||| | |
Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527
Query 49882 TCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT 49941
||||| || |||| | | ||||| | | | ||||||| ||| || |
Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTTT 14764469
Query 49942 AAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 49999
|| || ||||||| | || |||||||| | ||| | ||||| ||||| ||| |
Sbjct 14764468 CAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCA 14764409
Query 50000 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACG 50059
||| |||||| || | ||| ||||| | ||||| || || |||||||||||||| |
Sbjct 14764408 ATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAG 14764349
Query 50060 CAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCAT 50119
||||||| |||||||||||||| ||||| || || ||||| |||| || || ||||||
Sbjct 14764348 CAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAA 14764289
Query 50120 AACTGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 50176
|| | || | ||| ||||| || ||||||||| || || ||| | | | | |
Sbjct 14764288 AAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATG 14764229
Query 50177 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 50236
| | | |||| |||||||| || | || |||| | | | || | ||| || |
Sbjct 14764228 GAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTT 14764169
Query 50237 CGATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 50293
|||| ||| | |||||| || ||||| ||||| ||||| || || || || |
Sbjct 14764168 CGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCAT 14764112
Query 50294 AGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCAT 50353
|||| | | ||||||| ||| || |||||| || |||||| || | ||||| ||||
Sbjct 14764111 AGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCAT 14764052
Query 50354 TCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403
| || || || ||| || ||||| || || || ||| || ||||||
Sbjct 14764051 TAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267587921400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |