Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1 677 0.0
seq2 554 6e-153
>seq1
Length=11693564
Score = 677 bits (750), Expect = 0.0
Identities = 1372/2026 (68%), Gaps = 31/2026 (2%)
Strand=Plus/Plus
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
|||| ||| | ||| || |||||| || || || || | || |||||||| | ||
Sbjct 6013273 TGAAGATTAAGCGATTGTGATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATT 6013332
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040
|| ||||| | |||||||||| ||||||||||| | ||||||| |||||
Sbjct 6013333 ATATCTTTTTGAGATATTTCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATT 6013392
Query 71041 TTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097
| | || || || || |||||| || || || ||| ||| | | ||||||| ||
Sbjct 6013393 TCTTTAATATTTTGGATAGATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTC 6013452
Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157
|||| || || ||||| || |||| ||||||||||| || | ||| || |||||
Sbjct 6013453 CATATGTTAAGATCAATTAAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCT 6013512
Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217
|| | || | | ||||||||| ||| ||||| ||||| | || |||||||||||
Sbjct 6013513 GAAAGAACACGTCTAGTGTAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCT 6013572
Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCA 71277
| ||| || |||||||| ||||| ||||| || || | |||| | |||||| | ||||
Sbjct 6013573 AGAATCTGTGCAGTTGAAGCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCA 6013632
Query 71278 TGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNN 71337
||| | || | |||||| || |||||||| ||| | ||| |||| ||
Sbjct 6013633 TGTTTTGCAATGTCTGCTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTC 6013692
Query 71338 NNNNNNNNNNNNNNNNNNATGCCGTTAC-TAGCGTATGATCCTGCATATGTATCGTATGG 71396
|| || || || | | ||||| ||||||| || || ||
Sbjct 6013693 CACATGTCATATTGAAGAATACCTTTTGATACTGGA-GATCCATCATATGTCTCATAAGG 6013751
Query 71397 TCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAA 71456
|| || ||| |||| |||||| || || |||||||||| ||||| ||||| ||
Sbjct 6013752 ACCATCACGTTCAGCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAA 6013811
Query 71457 AATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAA 71516
|||| |||||| || |||| || | || | || |||||| | || |||||
Sbjct 6013812 AATCAACTTATTAAGTTCTTTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAA 6013871
Query 71517 CGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTC 71576
|| || ||||| || ||||| |||||||| || || | ||||||| |||| || ||
Sbjct 6013872 TGCATCAGCTAAACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCT 6013931
Query 71577 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTAC 71636
||||| || | |||||||||||| | ||| ||||||||||| | |||| | || |
Sbjct 6013932 GGCTTCAGGGACAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAAT 6013991
Query 71637 TTTG---ACCACATCCTTTAGTTTGAGA---AAATCAAATCTCCCATCTATTACA--AAC 71688
||| || |||| | |||||| | ||| || | | ||||||| || |||
Sbjct 6013992 TTTAGAAACAACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAAC 6014051
Query 71689 ACGT---TCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATA 71744
| | | ||| |||| |||| | |||||||| || || || |||| | | |||
Sbjct 6014052 AAATCTATTAAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATA 6014111
Query 71745 TTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 71804
|| | ||||||||| || | ||| ||| || |||||||| | |||||||||||||||
Sbjct 6014112 TTCAACAATTTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACT 6014171
Query 71805 CTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTC 71864
|| ||||| ||| || |||| ||| | || || || |||||||| ||| |||
Sbjct 6014172 TTTACGATTACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTC 6014231
Query 71865 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTC 71924
|||| || ||| | |||| ||||||||| || |||| | || || ||||
Sbjct 6014232 ACAAATCTTTTGCCAAATAACTCTGGCCTTTATTTGTTTTCTGTAACGTTTCTCATTTTC 6014291
Query 71925 GTA-TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATT 71983
|| ||||| ||||||| || || | || ||||||| || || | |||||||||||
Sbjct 6014292 ATACTTGTG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATT 6014350
Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAG 72043
| | || |||||||| ||||| | || | | ||| ||||||||||| | |||||
Sbjct 6014351 CGTGGGGGCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAG 6014410
Query 72044 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT 72103
||||||||||| | ||||| ||| | | ||| | || || |||||||| || |
Sbjct 6014411 GAATCCAAAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCT 6014470
Query 72104 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 72163
||||||| | || | | ||| |||| |||||| ||||| | ||||| || | |||
Sbjct 6014471 TAAGATCCAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTC 6014530
Query 72164 CCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 72223
| || | ||| ||||| || || || | || | || || || ||| ||||||||||||
Sbjct 6014531 CAGGTCTTTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACA 6014590
Query 72224 TTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAA 72283
|||| || | ||||| |||| |||||| || || ||| | ||| | |||||||
Sbjct 6014591 TTGGTATTAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAA 6014650
Query 72284 T--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341
| | || ||| | || || || || || ||| || |||||||| ||| ||||
Sbjct 6014651 TACAATGAACATT--CAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTT 6014708
Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401
| |||||||| || || || || |||||| ||| | |||| ||||| |||
Sbjct 6014709 AAGAGTATCATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGA 6014768
Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461
|| || |||| || ||||| ||||||||||| || ||||| || || |||||||| ||
Sbjct 6014769 CAGCTGTGGACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTT 6014828
Query 72462 TTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTA 72520
| ||||| ||| | || || |||||| | || | ||||| ||| ||||| |
Sbjct 6014829 CTGAGACATATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAA 6014887
Query 72521 CCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 72580
| || ||||||||||| | ||| || ||||||||| | | || ||||||||| || |
Sbjct 6014888 CTGCCACACGCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATA 6014947
Query 72581 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 72640
|| || ||| | || ||||| |||||||| | | ||| |||| | ||||
Sbjct 6014948 GATATGAACGTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAA 6015007
Query 72641 TAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATG-GTGATACTTGA- 72698
||| | ||||| |||||||| || ||| || | || | || | | | | | |
Sbjct 6015008 CGATAGCAGAATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCAC 6015064
Query 72699 -AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCA 72757
|| || || ||||| || || || || | |||||| |||| || |||
Sbjct 6015065 TTATCATTGGCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAG 6015124
Query 72758 CTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTA 72817
|||| ||| ||| ||||||| || || | ||| || || || ||||| || ||||
Sbjct 6015125 CTTCTGAAAAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTA 6015184
Query 72818 GAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGT 72877
| || |||||||||||||| ||| || | | || | | ||| || || | | | |
Sbjct 6015185 GTATAGCATAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTAT 6015244
Query 72878 CCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 72923
| ||||| || |||| ||| |||||||| | |||||||||||| ||
Sbjct 6015245 CTAATTCAACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
>seq2
Length=16759152
Score = 554 bits (614), Expect = 6e-153
Identities = 1372/2058 (67%), Gaps = 61/2058 (3%)
Strand=Plus/Minus
Query 70819 GATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAA 70878
|| || | ||| || | || ||| ||||| || ||||||| || | ||||||| |||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 70879 AAATGCAT---ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGAC 70935
|||||||| ||| || | ||| | || | || | || | | | ||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 70936 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 70994
||| |||||| || || | |||| || ||||||||| || || ||||||| |||
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302
Query 70995 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 71051
||||||||| | ||||||||||| | | || |||| ||||| | | |||| ||
Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242
Query 71052 AATGGATCCACCATCTGCAATAATCCTATTTT-TGATCTCTTCATTCCATAATTTTCTCT 71110
|||||||||| || | |||| || |||| | ||| |||||||||| | ||
Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183
Query 71111 CGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTAC 71170
||||| | | || ||||||| ||| || |||||||| |||||||| || |||| |
Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123
Query 71171 GAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAG 71230
|| || |||||| ||||| ||||| | || ||||| ||||| | |||||||| |
Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063
Query 71231 TTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTT 71290
| ||||| || ||||| || || | |||| ||| | ||||||| | || ||
Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAA---AACGTATAA 8586006
Query 71291 TATCTT---TTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNN 71347
| |||| ||| | ||||| | ||| | ||| ||| | |||
Sbjct 8586005 TTTCTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCAT 8585946
Query 71348 NNNNNNNNATGCCGTTACTAGC-GTATGATCCTGCATATGTATCGTATGGTCCTT-CTTT 71405
|| || || || | | ||| | | |||| || || ||| | |||
Sbjct 8585945 ACTGAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTC 8585887
Query 71406 TTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTT 71465
|| | | | |||||| || || | ||| |||| |||||| ||||| ||||| || |
Sbjct 8585886 TTTGACAA-TTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTAT 8585828
Query 71466 ATTGAGATCTTGTGCTTCCGG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 71524
||| ||||||| ||||| || | | | ||| ||||| | | || | ||| | || |
Sbjct 8585827 ATTAAGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAG 8585769
Query 71525 CTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTG 71584
| | ||||||||| ||||| || || || | || | ||| || | |||||||
Sbjct 8585768 CAAGTCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTT 8585709
Query 71585 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCA 71644
| |||||| |||||||||| ||||||||||| | |||||| || | ||| ||
Sbjct 8585708 CTAGTGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCA 8585649
Query 71645 CATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATT------------ACAAACACGT 71692
|||| | || | ||| |||||| | | | || ||||||| |
Sbjct 8585648 CATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATAT 8585589
Query 71693 TCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAA 71752
| | |||| ||||| | ||||||||| || || || | | | |||||| ||||
Sbjct 8585588 TAAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAA 8585529
Query 71753 TTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 71812
||||||| || ||||| ||| | || ||||||||||||||||||||||| || |
Sbjct 8585528 TTTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGAT 8585469
Query 71813 TACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 71872
|||| ||| ||||||| ||| | ||| |||||||||||||||||||||| |||
Sbjct 8585468 TACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTT 8585409
Query 71873 CTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTG 71932
| ||| || | || ||| |||||| || | | || ||||| |||| ||||
Sbjct 8585408 TCTGCCAAACAAATCTAGCTTTTATTTGCTTTCGGAACCTTTTTTCATTTTCATATTTAA 8585349
Query 71933 TATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGAC 71992
|||| | | || || | || || || ||| || | || |||||||||| ||||
Sbjct 8585348 TATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGAC 8585289
Query 71993 ACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 72052
|||| |||||||| | ||| | | || ||||||||||| | ||| |||| |||||
Sbjct 8585288 ACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAA 8585229
Query 72053 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT-CCTGTATTCTTTTTAAGATCG 72111
| | ||||| ||| | | ||| |||| || | ||||| || ||| | | |||
Sbjct 8585228 GTCCATAAAATAAATCACGAGCTCT-TGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170
Query 72112 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGT 72171
| || |||| ||||||| |||||| ||||||||||| || || | | || || |||
Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110
Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231
|| || || |||||||| | || | ||| || |||||||||| | |||||||| ||
Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050
Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT---ATTG 72288
| |||||| |||| ||||| || || | ||| | ||||| |||||||| | |
Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990
Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348
|| || || || ||||| || || ||| || |||| || ||| |||| || ||
Sbjct 8584989 ATACTTAAT---CCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTG 8584933
Query 72349 TCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTG 72407
||||| || || || ||| |||||| || |||||| || |||||| || | |||
Sbjct 8584932 TCATAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTG 8584874
Query 72408 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 72467
|||| |||||| ||||||||||| || || ||||| || |||||||||||| |||
Sbjct 8584873 TGCACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGA 8584814
Query 72468 CAGTAGAT-TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526
|| || || || ||||||||||| || | ||||| | ||| ||| ||| || |
Sbjct 8584813 CA-TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTA 8584755
Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586
| ||||||||||||| ||||||||||| || || || | ||| ||| | || || || |
Sbjct 8584754 CTCGCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATG 8584695
Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATA 72645
|| ||| | ||| |||| |||||||| || || |||| ||| ||| | ||||
Sbjct 8584694 ATCGTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATA 8584636
Query 72646 ACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAA 72703
|| || | ||||| || ||| | || || | ||| | | ||| | || |
Sbjct 8584635 ACTGAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCA 8584578
Query 72704 TCGGAGAATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTT 72760
||| |||||| || | ||| | || ||| || ||||||| | ||| ||||
Sbjct 8584577 AAGGACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTT 8584521
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|| |||| ||||| |||| || || | ||||| | ||| || | || ||||
Sbjct 8584520 CAGAAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATT 8584461
Query 72821 TGGCATAATCTGGATGTT 72838
| ||||||| |||||||
Sbjct 8584460 TTTCATAATCAGGATGTT 8584443
Score = 259 bits (286), Expect = 6e-64
Identities = 525/772 (68%), Gaps = 23/772 (3%)
Strand=Plus/Minus
Query 41750 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809
|| ||| ||||||||| || | ||| || |||||| || ||| || || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 41869
|| ||||| || | ||| ||||| |||| |||||||| || || |||||||||||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 41870 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATC 41929
||| | | | ||| | ||| || || | |||| |||||||| || |
Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587
Query 41930 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 41986
||| || | |||||||| || | | ||| |||||||| | ||||| |||| | |
Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527
Query 41987 TCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGT--GGATACA 42044
|||||| || || | | | ||||| | ||| ||||||| ||| | | ||
Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTTTGTTTTCA 14764467
Query 42045 A--TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAAT 42102
| ||| | |||||| | || |||||||| | ||| | ||||||||||| |||
Sbjct 14764466 AGGTAACT----AAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAAT 14764411
Query 42103 TAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGA 42162
||||| |||||| || | ||| ||||| | ||||| || || ||||||||||| ||
Sbjct 14764410 CAATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGA 14764351
Query 42163 CGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 42222
|||||||| |||||||||||||| ||||| || || ||||| ||||||| || |||||
Sbjct 14764350 AGCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCC 14764291
Query 42223 ATAACCGGCA---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACA 42279
| || ||| | ||| ||||| || ||||||||| || || ||| | | | |
Sbjct 14764290 AAAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAA 14764231
Query 42280 AGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGT 42339
|| | | |||| |||||||| || | || |||| | | | || | ||| ||
Sbjct 14764230 TGGAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGT 14764171
Query 42340 ATCGATCAAAAGACT---ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCC 42396
||||| ||| | |||||| || ||||| ||||| ||||| || || || ||
Sbjct 14764170 TTCGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACC 14764114
Query 42397 GTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTC 42456
||||| | | ||||||| || || |||||| || |||||| || | ||||| ||
Sbjct 14764113 ATAGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTC 14764054
Query 42457 GTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 42508
|| || || || ||| || ||||| || || || ||| || ||||||
Sbjct 14764053 ATTAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138067452600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |