Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 677 0.0 seq2 554 6e-153 >seq1 Length=11693564 Score = 677 bits (750), Expect = 0.0 Identities = 1372/2026 (68%), Gaps = 31/2026 (2%) Strand=Plus/Plus Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 |||| ||| | ||| || |||||| || || || || | || |||||||| | || Sbjct 6013273 TGAAGATTAAGCGATTGTGATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATT 6013332 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 || ||||| | |||||||||| ||||||||||| | ||||||| ||||| Sbjct 6013333 ATATCTTTTTGAGATATTTCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATT 6013392 Query 71041 TTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 | | || || || || |||||| || || || ||| ||| | | ||||||| || Sbjct 6013393 TCTTTAATATTTTGGATAGATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTC 6013452 Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157 |||| || || ||||| || |||| ||||||||||| || | ||| || ||||| Sbjct 6013453 CATATGTTAAGATCAATTAAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCT 6013512 Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217 || | || | | ||||||||| ||| ||||| ||||| | || ||||||||||| Sbjct 6013513 GAAAGAACACGTCTAGTGTAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCT 6013572 Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCA 71277 | ||| || |||||||| ||||| ||||| || || | |||| | |||||| | |||| Sbjct 6013573 AGAATCTGTGCAGTTGAAGCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCA 6013632 Query 71278 TGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNN 71337 ||| | || | |||||| || |||||||| ||| | ||| |||| || Sbjct 6013633 TGTTTTGCAATGTCTGCTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTC 6013692 Query 71338 NNNNNNNNNNNNNNNNNNATGCCGTTAC-TAGCGTATGATCCTGCATATGTATCGTATGG 71396 || || || || | | ||||| ||||||| || || || Sbjct 6013693 CACATGTCATATTGAAGAATACCTTTTGATACTGGA-GATCCATCATATGTCTCATAAGG 6013751 Query 71397 TCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAA 71456 || || ||| |||| |||||| || || |||||||||| ||||| ||||| || Sbjct 6013752 ACCATCACGTTCAGCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAA 6013811 Query 71457 AATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAA 71516 |||| |||||| || |||| || | || | || |||||| | || ||||| Sbjct 6013812 AATCAACTTATTAAGTTCTTTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAA 6013871 Query 71517 CGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTC 71576 || || ||||| || ||||| |||||||| || || | ||||||| |||| || || Sbjct 6013872 TGCATCAGCTAAACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCT 6013931 Query 71577 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTAC 71636 ||||| || | |||||||||||| | ||| ||||||||||| | |||| | || | Sbjct 6013932 GGCTTCAGGGACAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAAT 6013991 Query 71637 TTTG---ACCACATCCTTTAGTTTGAGA---AAATCAAATCTCCCATCTATTACA--AAC 71688 ||| || |||| | |||||| | ||| || | | ||||||| || ||| Sbjct 6013992 TTTAGAAACAACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAAC 6014051 Query 71689 ACGT---TCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATA 71744 | | | ||| |||| |||| | |||||||| || || || |||| | | ||| Sbjct 6014052 AAATCTATTAAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATA 6014111 Query 71745 TTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 71804 || | ||||||||| || | ||| ||| || |||||||| | ||||||||||||||| Sbjct 6014112 TTCAACAATTTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACT 6014171 Query 71805 CTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTC 71864 || ||||| ||| || |||| ||| | || || || |||||||| ||| ||| Sbjct 6014172 TTTACGATTACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTC 6014231 Query 71865 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTC 71924 |||| || ||| | |||| ||||||||| || |||| | || || |||| Sbjct 6014232 ACAAATCTTTTGCCAAATAACTCTGGCCTTTATTTGTTTTCTGTAACGTTTCTCATTTTC 6014291 Query 71925 GTA-TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATT 71983 || ||||| ||||||| || || | || ||||||| || || | ||||||||||| Sbjct 6014292 ATACTTGTG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATT 6014350 Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAG 72043 | | || |||||||| ||||| | || | | ||| ||||||||||| | ||||| Sbjct 6014351 CGTGGGGGCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAG 6014410 Query 72044 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT 72103 ||||||||||| | ||||| ||| | | ||| | || || |||||||| || | Sbjct 6014411 GAATCCAAAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCT 6014470 Query 72104 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 72163 ||||||| | || | | ||| |||| |||||| ||||| | ||||| || | ||| Sbjct 6014471 TAAGATCCAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTC 6014530 Query 72164 CCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 72223 | || | ||| ||||| || || || | || | || || || ||| |||||||||||| Sbjct 6014531 CAGGTCTTTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACA 6014590 Query 72224 TTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAA 72283 |||| || | ||||| |||| |||||| || || ||| | ||| | ||||||| Sbjct 6014591 TTGGTATTAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAA 6014650 Query 72284 T--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341 | | || ||| | || || || || || ||| || |||||||| ||| |||| Sbjct 6014651 TACAATGAACATT--CAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTT 6014708 Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401 | |||||||| || || || || |||||| ||| | |||| ||||| ||| Sbjct 6014709 AAGAGTATCATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGA 6014768 Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461 || || |||| || ||||| ||||||||||| || ||||| || || |||||||| || Sbjct 6014769 CAGCTGTGGACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTT 6014828 Query 72462 TTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTA 72520 | ||||| ||| | || || |||||| | || | ||||| ||| ||||| | Sbjct 6014829 CTGAGACATATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAA 6014887 Query 72521 CCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 72580 | || ||||||||||| | ||| || ||||||||| | | || ||||||||| || | Sbjct 6014888 CTGCCACACGCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATA 6014947 Query 72581 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 72640 || || ||| | || ||||| |||||||| | | ||| |||| | |||| Sbjct 6014948 GATATGAACGTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAA 6015007 Query 72641 TAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATG-GTGATACTTGA- 72698 ||| | ||||| |||||||| || ||| || | || | || | | | | | | Sbjct 6015008 CGATAGCAGAATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCAC 6015064 Query 72699 -AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCA 72757 || || || ||||| || || || || | |||||| |||| || ||| Sbjct 6015065 TTATCATTGGCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAG 6015124 Query 72758 CTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTA 72817 |||| ||| ||| ||||||| || || | ||| || || || ||||| || |||| Sbjct 6015125 CTTCTGAAAAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTA 6015184 Query 72818 GAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGT 72877 | || |||||||||||||| ||| || | | || | | ||| || || | | | | Sbjct 6015185 GTATAGCATAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTAT 6015244 Query 72878 CCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 72923 | ||||| || |||| ||| |||||||| | |||||||||||| || Sbjct 6015245 CTAATTCAACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290 >seq2 Length=16759152 Score = 554 bits (614), Expect = 6e-153 Identities = 1372/2058 (67%), Gaps = 61/2058 (3%) Strand=Plus/Minus Query 70819 GATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAA 70878 || || | ||| || | || ||| ||||| || ||||||| || | ||||||| ||| Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 70879 AAATGCAT---ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGAC 70935 |||||||| ||| || | ||| | || | || | || | | | || Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361 Query 70936 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 70994 ||| |||||| || || | |||| || ||||||||| || || ||||||| ||| Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302 Query 70995 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 71051 ||||||||| | ||||||||||| | | || |||| ||||| | | |||| || Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242 Query 71052 AATGGATCCACCATCTGCAATAATCCTATTTT-TGATCTCTTCATTCCATAATTTTCTCT 71110 |||||||||| || | |||| || |||| | ||| |||||||||| | || Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183 Query 71111 CGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTAC 71170 ||||| | | || ||||||| ||| || |||||||| |||||||| || |||| | Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123 Query 71171 GAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAG 71230 || || |||||| ||||| ||||| | || ||||| ||||| | |||||||| | Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063 Query 71231 TTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTT 71290 | ||||| || ||||| || || | |||| ||| | ||||||| | || || Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAA---AACGTATAA 8586006 Query 71291 TATCTT---TTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNN 71347 | |||| ||| | ||||| | ||| | ||| ||| | ||| Sbjct 8586005 TTTCTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCAT 8585946 Query 71348 NNNNNNNNATGCCGTTACTAGC-GTATGATCCTGCATATGTATCGTATGGTCCTT-CTTT 71405 || || || || | | ||| | | |||| || || ||| | ||| Sbjct 8585945 ACTGAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTC 8585887 Query 71406 TTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTT 71465 || | | | |||||| || || | ||| |||| |||||| ||||| ||||| || | Sbjct 8585886 TTTGACAA-TTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTAT 8585828 Query 71466 ATTGAGATCTTGTGCTTCCGG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 71524 ||| ||||||| ||||| || | | | ||| ||||| | | || | ||| | || | Sbjct 8585827 ATTAAGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAG 8585769 Query 71525 CTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTG 71584 | | ||||||||| ||||| || || || | || | ||| || | ||||||| Sbjct 8585768 CAAGTCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTT 8585709 Query 71585 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCA 71644 | |||||| |||||||||| ||||||||||| | |||||| || | ||| || Sbjct 8585708 CTAGTGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCA 8585649 Query 71645 CATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATT------------ACAAACACGT 71692 |||| | || | ||| |||||| | | | || ||||||| | Sbjct 8585648 CATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATAT 8585589 Query 71693 TCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAA 71752 | | |||| ||||| | ||||||||| || || || | | | |||||| |||| Sbjct 8585588 TAAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAA 8585529 Query 71753 TTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 71812 ||||||| || ||||| ||| | || ||||||||||||||||||||||| || | Sbjct 8585528 TTTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGAT 8585469 Query 71813 TACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 71872 |||| ||| ||||||| ||| | ||| |||||||||||||||||||||| ||| Sbjct 8585468 TACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTT 8585409 Query 71873 CTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTG 71932 | ||| || | || ||| |||||| || | | || ||||| |||| |||| Sbjct 8585408 TCTGCCAAACAAATCTAGCTTTTATTTGCTTTCGGAACCTTTTTTCATTTTCATATTTAA 8585349 Query 71933 TATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGAC 71992 |||| | | || || | || || || ||| || | || |||||||||| |||| Sbjct 8585348 TATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGAC 8585289 Query 71993 ACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 72052 |||| |||||||| | ||| | | || ||||||||||| | ||| |||| ||||| Sbjct 8585288 ACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAA 8585229 Query 72053 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT-CCTGTATTCTTTTTAAGATCG 72111 | | ||||| ||| | | ||| |||| || | ||||| || ||| | | ||| Sbjct 8585228 GTCCATAAAATAAATCACGAGCTCT-TGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170 Query 72112 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGT 72171 | || |||| ||||||| |||||| ||||||||||| || || | | || || ||| Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110 Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231 || || || |||||||| | || | ||| || |||||||||| | |||||||| || Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050 Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT---ATTG 72288 | |||||| |||| ||||| || || | ||| | ||||| |||||||| | | Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990 Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348 || || || || ||||| || || ||| || |||| || ||| |||| || || Sbjct 8584989 ATACTTAAT---CCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTG 8584933 Query 72349 TCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTG 72407 ||||| || || || ||| |||||| || |||||| || |||||| || | ||| Sbjct 8584932 TCATAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTG 8584874 Query 72408 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 72467 |||| |||||| ||||||||||| || || ||||| || |||||||||||| ||| Sbjct 8584873 TGCACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGA 8584814 Query 72468 CAGTAGAT-TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526 || || || || ||||||||||| || | ||||| | ||| ||| ||| || | Sbjct 8584813 CA-TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTA 8584755 Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586 | ||||||||||||| ||||||||||| || || || | ||| ||| | || || || | Sbjct 8584754 CTCGCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATG 8584695 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATA 72645 || ||| | ||| |||| |||||||| || || |||| ||| ||| | |||| Sbjct 8584694 ATCGTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATA 8584636 Query 72646 ACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAA 72703 || || | ||||| || ||| | || || | ||| | | ||| | || | Sbjct 8584635 ACTGAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCA 8584578 Query 72704 TCGGAGAATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTT 72760 ||| |||||| || | ||| | || ||| || ||||||| | ||| |||| Sbjct 8584577 AAGGACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTT 8584521 Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820 || |||| ||||| |||| || || | ||||| | ||| || | || |||| Sbjct 8584520 CAGAAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATT 8584461 Query 72821 TGGCATAATCTGGATGTT 72838 | ||||||| ||||||| Sbjct 8584460 TTTCATAATCAGGATGTT 8584443 Score = 259 bits (286), Expect = 6e-64 Identities = 525/772 (68%), Gaps = 23/772 (3%) Strand=Plus/Minus Query 41750 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 41809 || ||| ||||||||| || | ||| || |||||| || ||| || || ||||| Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704 Query 41810 GTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 41869 || ||||| || | ||| ||||| |||| |||||||| || || |||||||||||| | Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644 Query 41870 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATC 41929 ||| | | | ||| | ||| || || | |||| |||||||| || | Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587 Query 41930 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 41986 ||| || | |||||||| || | | ||| |||||||| | ||||| |||| | | Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527 Query 41987 TCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGT--GGATACA 42044 |||||| || || | | | ||||| | ||| ||||||| ||| | | || Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTTTGTTTTCA 14764467 Query 42045 A--TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAAT 42102 | ||| | |||||| | || |||||||| | ||| | ||||||||||| ||| Sbjct 14764466 AGGTAACT----AAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAAT 14764411 Query 42103 TAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGA 42162 ||||| |||||| || | ||| ||||| | ||||| || || ||||||||||| || Sbjct 14764410 CAATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGA 14764351 Query 42163 CGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 42222 |||||||| |||||||||||||| ||||| || || ||||| ||||||| || ||||| Sbjct 14764350 AGCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCC 14764291 Query 42223 ATAACCGGCA---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACA 42279 | || ||| | ||| ||||| || ||||||||| || || ||| | | | | Sbjct 14764290 AAAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAA 14764231 Query 42280 AGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGT 42339 || | | |||| |||||||| || | || |||| | | | || | ||| || Sbjct 14764230 TGGAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGT 14764171 Query 42340 ATCGATCAAAAGACT---ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCC 42396 ||||| ||| | |||||| || ||||| ||||| ||||| || || || || Sbjct 14764170 TTCGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACC 14764114 Query 42397 GTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTC 42456 ||||| | | ||||||| || || |||||| || |||||| || | ||||| || Sbjct 14764113 ATAGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTC 14764054 Query 42457 GTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 42508 || || || || ||| || ||||| || || || ||| || |||||| Sbjct 14764053 ATTAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138067452600