Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 645 4e-180 seq2 560 1e-154 >seq1 Length=11693564 Score = 645 bits (714), Expect = 4e-180 Identities = 1436/2137 (67%), Gaps = 55/2137 (3%) Strand=Plus/Plus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||||| || | || || |||||||| ||||||| || | |||| | | |||| Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233 Query 62076 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 62132 ||||| ||| | ||| ||| || | || | ||| | ||| | ||||| Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290 Query 62133 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 62192 |||||| || || || || | || |||||||| | || || ||||| | ||| Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350 Query 62193 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 62249 ||||||| ||||||||||| | ||||||| ||||| | | || || || || Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410 Query 62250 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62309 |||||| || || || ||| |||| | | ||| ||| |||||| || || || Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470 Query 62310 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62369 ||| || |||| ||||| ||||| || | ||| || ||||| || | || | | |||| Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530 Query 62370 TAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62429 ||||| ||| ||||| ||||| | || ||||||||||| | ||| || |||||||| Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590 Query 62430 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 62487 ||||| ||||| || || | |||||| |||||| | ||| ||||| || || | Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648 Query 62488 CTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTA 62547 |||||| || |||||||| ||| | ||| ||| || ||| | Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708 Query 62548 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62603 ||||||| || ||||| | |||| ||||||| || || || || || ||| Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764 Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663 |||| |||||| || || ||||| || | ||||| ||||| || ||| |||||| Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824 Query 62664 AGATCTTGTGCTTCCAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTA 62721 || |||| || | ||| | | ||| |||||| | || ||||| || || |||| Sbjct 6013825 AGTTCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTA 6013882 Query 62722 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 62781 | || |||||||||||||| || || | |||||| |||| || || ||||| || | Sbjct 6013883 AACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGA 6013942 Query 62782 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGA--C 62836 |||||||||||| | ||| ||||||||||| | |||| | | |||| || || | Sbjct 6013943 CAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAAAC 6014000 Query 62837 CACATCCTTCAGTTTGAGA---AAATCAAATCGCCCATCTA----TT--ACAAACATGTT 62887 |||| |||||| | ||| || | ||||||| || ||||| | || Sbjct 6014001 AACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATT 6014060 Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 | |||| |||| | |||||||| || || || |||| | | ||||| | || Sbjct 6014061 AAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAAT 6014120 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||||| || | ||| ||| || || ||||| | ||||||||||||||| || || Sbjct 6014121 TTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATT 6014180 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 ||| ||| || |||| || | || || || |||||||| ||| ||| |||| Sbjct 6014181 ACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTT 6014240 Query 63068 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC--TTTCGTA-TAG 63124 || ||| | |||| ||||||||| | ||| | | | |||||| |||| || | | Sbjct 6014241 TTGCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTG 6014298 Query 63125 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184 || ||| ||| || || | || |||||| || || | |||||||||||| | || Sbjct 6014299 TG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGG 6014357 Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244 |||||||| ||||| | ||| | || || ||||||||||| | |||||||||||| Sbjct 6014358 GCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCA 6014417 Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304 |||| | ||||| ||| | | ||| | ||| || |||||||| || |||||||| Sbjct 6014418 AAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATC 6014477 Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 | || | | ||| |||| |||||| ||||| | ||||| || | ||||||| | Sbjct 6014478 CAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCT 6014537 Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424 ||| ||||| || || || | || | || || || ||| |||||||||||||||| || Sbjct 6014538 TTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTAT 6014597 Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484 | || || ||| ||||||| ||||| ||| | ||| | ||||||||| | Sbjct 6014598 TAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATG 6014657 Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63544 || | || || || || || ||| || |||||||| ||| |||| | || || Sbjct 6014658 AACATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATC 6014717 Query 63545 ATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604 ||| ||||| || || |||||| ||| | |||| ||||| ||||| || | Sbjct 6014718 ATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGG 6014777 Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AA 63663 ||| || ||||| ||||||||||| || ||||| || || |||||||| || | ||| | Sbjct 6014778 ACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACAT 6014837 Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723 ||| | || || |||||| | || | ||||| ||||||||| ||||| |||| Sbjct 6014838 ATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACAC 6014896 Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783 ||||||| | || || ||||||||| | | || |||||||| || | || || Sbjct 6014897 GCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAAC 6014956 Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843 ||| | || ||||| |||||||| | | ||| |||| | |||| ||| | | Sbjct 6014957 GTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAG 6015016 Query 63844 AGTTGAGTTTATCCTTATATTTGTTAACTATATCCATG-GTGATACTTGA--AATAATCG 63900 | || |||||||| || ||| || | || | || | | | | | | || || | Sbjct 6015017 AATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTTATCATTG 6015073 Query 63901 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 63960 | ||||| || || || || | |||||| |||| || ||| |||| || Sbjct 6015074 GCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAA 6015133 Query 63961 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 64020 | ||| ||||||| || || | ||| || || || ||||| || ||||| || |||| Sbjct 6015134 AACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCAT 6015193 Query 64021 AATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTA 64080 |||| ||||| ||| || | | || | | ||| || || | | | || ||||| | Sbjct 6015194 AATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAA 6015253 Query 64081 CCGTTGTTACTCCATTATATATTCCTTGAATAACCTT 64117 | |||| ||| |||||||| | |||||| ||||| || Sbjct 6015254 CTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290 Score = 86.0 bits (94), Expect = 8e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 28464 ACCCAATTCTTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAAT 28523 ||||| ||||| || | ||||| |||| |||||||||| || || || || | |||||| Sbjct 581495 ACCCATCTCTTTAACTTCAGTTAATGATTTCCAATCCATATTTGCACTACCAATATAAAT 581554 Query 28524 ATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCC 28565 |||| | | |||| ||||||||||||||||| | ||| || Sbjct 581555 ATGTTTTTGATCAACAATCCAAAATTTTGTATGTAAAACACC 581596 >seq2 Length=16759152 Score = 560 bits (620), Expect = 1e-154 Identities = 1371/2055 (67%), Gaps = 55/2055 (3%) Strand=Plus/Minus Query 62013 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 62072 || || ||||| || | || ||| |||||||||||||||| || | ||||||| ||| Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 62073 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 62129 |||||||| ||| || | |||| | || | || || | | | | ||| Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361 Query 62130 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 62188 ||| |||||| || || | |||| || ||||||||| || || ||||||| ||| Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302 Query 62189 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 62245 ||||||||| | ||||||||||| | | || |||| ||||| | | |||| || Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242 Query 62246 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 62304 |||||||||| || | | || || |||| | ||| | |||||||| | || Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183 Query 62305 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 62364 ||||| | | || ||||| | ||| || |||||||| |||||||| || |||| || Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123 Query 62365 GAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAG 62424 || || |||||| ||||| ||||| | || ||||| ||||| | |||||||| | Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063 Query 62425 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 62484 | ||||| || ||||| || || | ||||| ||| | |||||| | | | |||| Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003 Query 62485 TATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62544 | |||| | ||||| | ||| | ||| || | ||| | Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943 Query 62545 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62603 | ||||| || || || | | ||| | | |||| || || ||| | ||||| Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884 Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663 | | |||||| || || | |||||| | |||||| ||||| || || || |||| Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824 Query 62664 AGATCTTGTGCTTCCAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAA 62722 ||||||| ||||| | | | | ||| ||||| | | || | ||| | || || | Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765 Query 62723 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62782 ||||||||||||||| || || || | ||| | ||| || | ||||||| | Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705 Query 62783 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 62839 |||||| |||||||||| ||||||||||| | |||||| |||||| |||| | || Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648 Query 62840 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT------------ACAAACATGTT 62887 ||| | || | ||| |||||| | | || |||||||| || Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588 Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 | |||| ||||| | ||||||||| || || || | | | |||||| || || Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||||| || ||||| ||| | || ||||||||||||||||||||||| || || Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 ||| ||| ||||||| || ||||| |||||||||||||||||||||| ||| Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408 Query 63068 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCCTTTCTCTTTCGTATAGT 63125 | ||| || | || ||| |||||| | ||| | | || |||| |||| ||| Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350 Query 63126 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 63185 |||| | | || || | || || || ||| || | || |||||||||| ||| Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290 Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245 ||||| || ||||| | || | | || ||||||||||| | ||| |||| |||| Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230 Query 63246 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63305 || | ||||| ||| | | ||| ||| || ||||| || ||| | | ||| Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170 Query 63306 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63365 | || |||| ||||||| |||||| ||||||||||| || || | | ||||| ||| Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110 Query 63366 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63425 || || || |||||||| | || | ||| || |||||||||| | |||||||| || Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050 Query 63426 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTA 63485 | ||| |||||| ||||| || || | ||| | ||||| |||||||| | Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990 Query 63486 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63545 || || || ||||| || || ||| || |||| || ||| |||| || |||||| Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930 Query 63546 TAGATACCCTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604 || || || || || |||||| || |||||| || |||||| || | ||| Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871 Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63664 |||| |||||| ||||||||||| || || ||||| || |||||||||||| ||| | Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812 Query 63665 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723 || || || ||||||||||| || | ||||| | ||||||| ||| || || | Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752 Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783 |||||||||| | ||||||||||| || || || | || ||| | || || || ||| Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692 Query 63784 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63842 ||| | ||| |||| |||||||| || || |||| ||| ||| | |||||| Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633 Query 63843 GAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAATCG 63900 |||| ||||| || ||| | || || | ||| | | ||| | || | | Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575 Query 63901 GAGAATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 63957 || |||||| || | ||| | || ||| || ||||||| | ||| |||||| Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518 Query 63958 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 64017 |||| ||||| |||| || || | ||||| | ||| || | || |||| | Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458 Query 64018 CATAATCCGGATGTT 64032 ||||||| ||||||| Sbjct 8584457 CATAATCAGGATGTT 8584443 Score = 269 bits (298), Expect = 3e-67 Identities = 526/770 (68%), Gaps = 19/770 (2%) Strand=Plus/Minus Query 32989 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33048 || ||| ||||||||| || | ||| || |||||| || ||| || || ||||| Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704 Query 33049 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 33108 |||||||| || | ||| ||||| |||| |||||||| || || |||||||||||| | Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644 Query 33109 tttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATC 33168 ||| | | | ||| | ||| || || || |||| |||||||| || | Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587 Query 33169 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 33225 ||| || | |||||||| || | | ||| |||||||| | ||||| |||| | | Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527 Query 33226 TCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT 33285 ||||| || |||| | | ||||| | | | ||||||| ||| || | Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTTT 14764469 Query 33286 AAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 33343 || || ||||||| | || |||||||| | ||| | ||||| ||||| ||| | Sbjct 14764468 CAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCA 14764409 Query 33344 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAG 33403 ||| |||||| || | ||| ||||| | ||||| || || |||||||||||||||| Sbjct 14764408 ATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAG 14764349 Query 33404 CGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT 33463 | ||||| |||||||||||||| ||||| || || ||||| ||||||| || |||||| Sbjct 14764348 CAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAA 14764289 Query 33464 AACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 33520 || || | ||| ||||| || ||||||||| || || ||| | | | | | Sbjct 14764288 AAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATG 14764229 Query 33521 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 33580 | | | |||| |||||||| || | || |||| | | | || | ||| || | Sbjct 14764228 GAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTT 14764169 Query 33581 CGATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 33637 |||| ||| | |||||| || ||||| ||||| ||||| || || || || | Sbjct 14764168 CGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCAT 14764112 Query 33638 AGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCAT 33697 |||| | | ||||||| ||| || |||||| || |||||| || ||||||| |||| Sbjct 14764111 AGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCAT 14764052 Query 33698 TCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33747 | || || || ||| || ||||| || || || ||| || |||||| Sbjct 14764051 TAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946148776600