Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 645 4e-180
seq2 560 1e-154
>seq1
Length=11693564
Score = 645 bits (714), Expect = 4e-180
Identities = 1436/2137 (67%), Gaps = 55/2137 (3%)
Strand=Plus/Plus
Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075
|| ||||| || | || || |||||||| ||||||| || | |||| | | ||||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 62076 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 62132
||||| ||| | ||| ||| || | || | ||| | ||| | |||||
Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290
Query 62133 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATT 62192
|||||| || || || || | || |||||||| | || || ||||| | |||
Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350
Query 62193 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 62249
||||||| ||||||||||| | ||||||| ||||| | | || || || ||
Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410
Query 62250 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62309
|||||| || || || ||| |||| | | ||| ||| |||||| || || ||
Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470
Query 62310 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62369
||| || |||| ||||| ||||| || | ||| || ||||| || | || | | ||||
Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530
Query 62370 TAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62429
||||| ||| ||||| ||||| | || ||||||||||| | ||| || ||||||||
Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590
Query 62430 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 62487
||||| ||||| || || | |||||| |||||| | ||| ||||| || || |
Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648
Query 62488 CTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTA 62547
|||||| || |||||||| ||| | ||| ||| || ||| |
Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708
Query 62548 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62603
||||||| || ||||| | |||| ||||||| || || || || || |||
Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764
Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663
|||| |||||| || || ||||| || | ||||| ||||| || ||| ||||||
Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824
Query 62664 AGATCTTGTGCTTCCAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTA 62721
|| |||| || | ||| | | ||| |||||| | || ||||| || || ||||
Sbjct 6013825 AGTTCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTA 6013882
Query 62722 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 62781
| || |||||||||||||| || || | |||||| |||| || || ||||| || |
Sbjct 6013883 AACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGA 6013942
Query 62782 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGA--C 62836
|||||||||||| | ||| ||||||||||| | |||| | | |||| || || |
Sbjct 6013943 CAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAAAC 6014000
Query 62837 CACATCCTTCAGTTTGAGA---AAATCAAATCGCCCATCTA----TT--ACAAACATGTT 62887
|||| |||||| | ||| || | ||||||| || ||||| | ||
Sbjct 6014001 AACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATT 6014060
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
| |||| |||| | |||||||| || || || |||| | | ||||| | ||
Sbjct 6014061 AAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAAT 6014120
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
||||| || | ||| ||| || || ||||| | ||||||||||||||| || ||
Sbjct 6014121 TTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATT 6014180
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
||| ||| || |||| || | || || || |||||||| ||| ||| ||||
Sbjct 6014181 ACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTT 6014240
Query 63068 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC--TTTCGTA-TAG 63124
|| ||| | |||| ||||||||| | ||| | | | |||||| |||| || | |
Sbjct 6014241 TTGCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTG 6014298
Query 63125 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184
|| ||| ||| || || | || |||||| || || | |||||||||||| | ||
Sbjct 6014299 TG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGG 6014357
Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244
|||||||| ||||| | ||| | || || ||||||||||| | ||||||||||||
Sbjct 6014358 GCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCA 6014417
Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304
|||| | ||||| ||| | | ||| | ||| || |||||||| || ||||||||
Sbjct 6014418 AAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATC 6014477
Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364
| || | | ||| |||| |||||| ||||| | ||||| || | ||||||| |
Sbjct 6014478 CAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCT 6014537
Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424
||| ||||| || || || | || | || || || ||| |||||||||||||||| ||
Sbjct 6014538 TTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTAT 6014597
Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484
| || || ||| ||||||| ||||| ||| | ||| | ||||||||| |
Sbjct 6014598 TAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATG 6014657
Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63544
|| | || || || || || ||| || |||||||| ||| |||| | || ||
Sbjct 6014658 AACATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATC 6014717
Query 63545 ATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604
||| ||||| || || |||||| ||| | |||| ||||| ||||| || |
Sbjct 6014718 ATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGG 6014777
Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AA 63663
||| || ||||| ||||||||||| || ||||| || || |||||||| || | ||| |
Sbjct 6014778 ACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACAT 6014837
Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723
||| | || || |||||| | || | ||||| ||||||||| ||||| ||||
Sbjct 6014838 ATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACAC 6014896
Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783
||||||| | || || ||||||||| | | || |||||||| || | || ||
Sbjct 6014897 GCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAAC 6014956
Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843
||| | || ||||| |||||||| | | ||| |||| | |||| ||| | |
Sbjct 6014957 GTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAG 6015016
Query 63844 AGTTGAGTTTATCCTTATATTTGTTAACTATATCCATG-GTGATACTTGA--AATAATCG 63900
| || |||||||| || ||| || | || | || | | | | | | || || |
Sbjct 6015017 AATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTTATCATTG 6015073
Query 63901 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 63960
| ||||| || || || || | |||||| |||| || ||| |||| ||
Sbjct 6015074 GCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAA 6015133
Query 63961 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 64020
| ||| ||||||| || || | ||| || || || ||||| || ||||| || ||||
Sbjct 6015134 AACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCAT 6015193
Query 64021 AATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTA 64080
|||| ||||| ||| || | | || | | ||| || || | | | || ||||| |
Sbjct 6015194 AATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAA 6015253
Query 64081 CCGTTGTTACTCCATTATATATTCCTTGAATAACCTT 64117
| |||| ||| |||||||| | |||||| ||||| ||
Sbjct 6015254 CTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
Score = 86.0 bits (94), Expect = 8e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 28464 ACCCAATTCTTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAAT 28523
||||| ||||| || | ||||| |||| |||||||||| || || || || | ||||||
Sbjct 581495 ACCCATCTCTTTAACTTCAGTTAATGATTTCCAATCCATATTTGCACTACCAATATAAAT 581554
Query 28524 ATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCC 28565
|||| | | |||| ||||||||||||||||| | ||| ||
Sbjct 581555 ATGTTTTTGATCAACAATCCAAAATTTTGTATGTAAAACACC 581596
>seq2
Length=16759152
Score = 560 bits (620), Expect = 1e-154
Identities = 1371/2055 (67%), Gaps = 55/2055 (3%)
Strand=Plus/Minus
Query 62013 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 62072
|| || ||||| || | || ||| |||||||||||||||| || | ||||||| |||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 62073 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 62129
|||||||| ||| || | |||| | || | || || | | | | |||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 62130 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTT-GTGG 62188
||| |||||| || || | |||| || ||||||||| || || ||||||| |||
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302
Query 62189 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 62245
||||||||| | ||||||||||| | | || |||| ||||| | | |||| ||
Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242
Query 62246 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 62304
|||||||||| || | | || || |||| | ||| | |||||||| | ||
Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183
Query 62305 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 62364
||||| | | || ||||| | ||| || |||||||| |||||||| || |||| ||
Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123
Query 62365 GAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAG 62424
|| || |||||| ||||| ||||| | || ||||| ||||| | |||||||| |
Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063
Query 62425 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 62484
| ||||| || ||||| || || | ||||| ||| | |||||| | | | ||||
Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003
Query 62485 TATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62544
| |||| | ||||| | ||| | ||| || | ||| |
Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943
Query 62545 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62603
| ||||| || || || | | ||| | | |||| || || ||| | |||||
Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884
Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663
| | |||||| || || | |||||| | |||||| ||||| || || || ||||
Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824
Query 62664 AGATCTTGTGCTTCCAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAA 62722
||||||| ||||| | | | | ||| ||||| | | || | ||| | || || |
Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765
Query 62723 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62782
||||||||||||||| || || || | ||| | ||| || | ||||||| |
Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705
Query 62783 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 62839
|||||| |||||||||| ||||||||||| | |||||| |||||| |||| | ||
Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648
Query 62840 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT------------ACAAACATGTT 62887
||| | || | ||| |||||| | | || |||||||| ||
Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
| |||| ||||| | ||||||||| || || || | | | |||||| || ||
Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
||||| || ||||| ||| | || ||||||||||||||||||||||| || ||
Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
||| ||| ||||||| || ||||| |||||||||||||||||||||| |||
Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408
Query 63068 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCCTTTCTCTTTCGTATAGT 63125
| ||| || | || ||| |||||| | ||| | | || |||| |||| |||
Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350
Query 63126 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 63185
|||| | | || || | || || || ||| || | || |||||||||| |||
Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290
Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245
||||| || ||||| | || | | || ||||||||||| | ||| |||| ||||
Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230
Query 63246 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63305
|| | ||||| ||| | | ||| ||| || ||||| || ||| | | |||
Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170
Query 63306 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63365
| || |||| ||||||| |||||| ||||||||||| || || | | ||||| |||
Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110
Query 63366 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63425
|| || || |||||||| | || | ||| || |||||||||| | |||||||| ||
Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050
Query 63426 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTA 63485
| ||| |||||| ||||| || || | ||| | ||||| |||||||| |
Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990
Query 63486 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63545
|| || || ||||| || || ||| || |||| || ||| |||| || ||||||
Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930
Query 63546 TAGATACCCTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604
|| || || || || |||||| || |||||| || |||||| || | |||
Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871
Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63664
|||| |||||| ||||||||||| || || ||||| || |||||||||||| ||| |
Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812
Query 63665 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723
|| || || ||||||||||| || | ||||| | ||||||| ||| || || |
Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752
Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783
|||||||||| | ||||||||||| || || || | || ||| | || || || |||
Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692
Query 63784 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63842
||| | ||| |||| |||||||| || || |||| ||| ||| | ||||||
Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633
Query 63843 GAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAATCG 63900
|||| ||||| || ||| | || || | ||| | | ||| | || | |
Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575
Query 63901 GAGAATGTTTCCCATT---TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 63957
|| |||||| || | ||| | || ||| || ||||||| | ||| ||||||
Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518
Query 63958 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 64017
|||| ||||| |||| || || | ||||| | ||| || | || |||| |
Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458
Query 64018 CATAATCCGGATGTT 64032
||||||| |||||||
Sbjct 8584457 CATAATCAGGATGTT 8584443
Score = 269 bits (298), Expect = 3e-67
Identities = 526/770 (68%), Gaps = 19/770 (2%)
Strand=Plus/Minus
Query 32989 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 33048
|| ||| ||||||||| || | ||| || |||||| || ||| || || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 33049 GTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtt 33108
|||||||| || | ||| ||||| |||| |||||||| || || |||||||||||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 33109 tttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATC 33168
||| | | | ||| | ||| || || || |||| |||||||| || |
Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587
Query 33169 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 33225
||| || | |||||||| || | | ||| |||||||| | ||||| |||| | |
Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527
Query 33226 TCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT 33285
||||| || |||| | | ||||| | | | ||||||| ||| || |
Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTT--TGTTTT 14764469
Query 33286 AAATGTT--TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 33343
|| || ||||||| | || |||||||| | ||| | ||||| ||||| ||| |
Sbjct 14764468 CAAGGTAACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCA 14764409
Query 33344 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAG 33403
||| |||||| || | ||| ||||| | ||||| || || ||||||||||||||||
Sbjct 14764408 ATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAG 14764349
Query 33404 CGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT 33463
| ||||| |||||||||||||| ||||| || || ||||| ||||||| || ||||||
Sbjct 14764348 CAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAA 14764289
Query 33464 AACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 33520
|| || | ||| ||||| || ||||||||| || || ||| | | | | |
Sbjct 14764288 AAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATG 14764229
Query 33521 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 33580
| | | |||| |||||||| || | || |||| | | | || | ||| || |
Sbjct 14764228 GAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTT 14764169
Query 33581 CGATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGT 33637
|||| ||| | |||||| || ||||| ||||| ||||| || || || || |
Sbjct 14764168 CGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCAT 14764112
Query 33638 AGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCAT 33697
|||| | | ||||||| ||| || |||||| || |||||| || ||||||| ||||
Sbjct 14764111 AGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCAT 14764052
Query 33698 TCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33747
| || || || ||| || ||||| || || || ||| || ||||||
Sbjct 14764051 TAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946148776600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |