Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 205 2e-47 seq2 176 1e-38 >seq1 Length=11693564 Score = 205 bits (226), Expect = 2e-47 Identities = 964/1504 (64%), Gaps = 58/1504 (4%) Strand=Plus/Minus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| |||| |||||| | || || || |||| || ||||| | ||| Sbjct 6014981 TATTTT-GGATTTAAGACACTTGAACGTTCATATCTATTAAAAATAAATGGGAAAGTTGC 6014923 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || || ||| | ||||||||||| || |||| || ||| | ||| || | Sbjct 6014922 TGAAAGACCACAACATTTATTAATGCGTGTGGCAGTTGGAATTCATGGGGATGATATTAA 6014863 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCCACGC 363562 | | | |||||||||||| | | || || ||| ||| || || || ||| | | Sbjct 6014862 TTCTGTTATTGAAACATAT--GACTATATGT-CTCAGAAGTG-GTTTACTCATGCCTCTC 6014807 Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAA 363621 ||||| | | ||||| ||||| | ||||||| ||||||| || |||||| |||| | Sbjct 6014806 CAACATTATTTAATGCAGGAACCAGACGTCCACAGCTGTCTTCGTG-TTTCTTACTAACA 6014748 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||| || ||||| || || ||||| | ||| || ||||| | ||||| | ||||| Sbjct 6014747 ATGTCTGATGATTCAATTGAAGGTATATATGATACTCTTAAACAATGTGCATTAATTTCA 6014688 Query 363682 AAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739 || ||| ||||| ||||| || || | || | ||||||| | || | Sbjct 6014687 AAATCTGCTGGCGGTATTGGATTGAAT--GTTCATTGTATTCGTGCTAATGGTTCTTTTA 6014630 Query 363740 TTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 || | || ||| || ||| || ||||| | | || ||| | | || ||| ||||| Sbjct 6014629 TTGGTGGTACAAATGG-TACATCTAATGGATTAATACCAATGTTGAGAGTTTTTAACAAT 6014571 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 || || | || || ||||| || ||| || | || || |||||||| ||||| Sbjct 6014570 ACAGCACGCTATGTTGACCAAGGGGGAAATAAAAGACCTGGAGCATTTGCTATATATCTA 6014511 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 || || ||||| || ||||| || ||| | || || |||||| || || || Sbjct 6014510 GAACCATGGCATGCTGACATTTTAGAATTTTTGGATCTTAAGAAAAATACAGGCCCTGAA 6014451 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 ||| | || |||||| | || |||| |||||| || |||| |||||||| || Sbjct 6014450 GAAGAAAGAGCTCGTGATTTATTTTATGGTCTTTGGATTCCTGATTTATTTATGAAACGT 6014391 Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 || ||| || ||||||| | | ||||| ||||||||||| || ||| ||| Sbjct 6014390 GTAGAGAAAGACTCTTATTGGTCTTTGATGTGCCCCCACGAATGTCCTGGACTTGAGGAT 6014331 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT-CG 364097 |||||||| | | || | |||| | ||||||||| || |||| | | | Sbjct 6014330 ACTTGGGGTGAGGCTTTTGAGGAATTATATCACAAGTATGAAAATGA--GAAACGTTACA 6014273 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG-------CAGATTG 364150 || |||| | | ||| || || |||| || | |||| | || |||| Sbjct 6014272 GAAAACAAATAAAGGCCAG-AGTTA---TTTGGCA--AAAGATTTGTGAAAGTCAAATTG 6014219 Query 364151 AGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGC 364210 | || |||||||| |||||| | ||||||||| || || || || || || || Sbjct 6014218 AAACCGGAACACCTTATATGGTTTACAAAGATCATTGTAATCGTAAAAGTAATCAACAAA 6014159 Query 364211 ACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCG 364270 | ||||| || ||| | || ||||||| || ||| ||||||| || || | Sbjct 6014158 ATCTTGGAACCATTAAATGTTCAAATTTATGTACTGAAATTGTTGAATATTGTGCACCAG 6014099 Query 364271 ACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--AA----AAG 364324 | || ||| |||||||| || | || || || ||| ||||| || || Sbjct 6014098 ATGAAGTTGCTGTATGTAATCTAGGATCTATTGCTCTTAATAGATTTGTTGAAGTTGTAG 6014039 Query 364325 ATGGTA------CTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTTGC 364377 |||||| ||||| | | | || ||| ||| || ||| || || ||| Sbjct 6014038 ATGGTAAACCTGCTTTTAATTTCAAACAACTTCATGTTGT-TTCTAAAATTCTAACTAAA 6013980 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437 ||| | | || |||| || ||||||||||| | ||||||||| || ||| Sbjct 6013979 AATTTGAATAAAATTATTGATGTCAATTATTATCCTGTCCCTGAAGCCAGAAAATCAAAT 6013920 Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG---ATG 364494 ||| | || || || |||||| ||||||| ||||| | ||||| | |||||| ||| Sbjct 6013919 ATGAGACACCGTCCAATTGGTATTGGTGTTCAGGGTTTAGCTGATGCATTTATGCTTATG 6013860 Query 364495 CTCAAGATGGCATTTGA-TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 | | | | ||| | ||| |||| |||| | || |||||| ||| |||||||| Sbjct 6013859 C----GTTATCCTTTCACTTCACCTGCCGCTAAAGAACTTAATAAGTTGATTTTTGAAAC 6013804 Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTC 364613 ||| || || ||| || ||||| ||||| | || || | || || Sbjct 6013803 AATTTACCATGGAGCATTGGAAGCTTCATGTGAAGTAGCTGAACGTGATGGTCCTTATGA 6013744 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || ||||| || || || | || | || | | || | ||| | |||||||||| Sbjct 6013743 GACATATGATGGATCTCCAGTATCAAAAGGTATTCTTCAATATGACATGTGGAATGTCAA 6013684 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733 ||| || |||| | ||||| || || | || || || |||||| | Sbjct 6013683 ACCAAGTGATTTATGGGATTGGGAAACTTTAAAAGCAGACATTGCAAAACATGGT-GTAA 6013625 Query 364734 CAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792 || | | | |||| || || ||||| || ||||| ||||||||||| || ||||| | Sbjct 6013624 GAAATTCTTTATTACTTGCTCCAATGCCAACTGCTTCAACTGCACAGATTCTAGGAAATA 6013565 Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 | || | | ||||| | ||| || |||| | | || |||||||| |||| || Sbjct 6013564 ATGAATCTATTGAACCATATACTTCTAACATTTACACTAGACGTGTTCTTTCAGGAG-AT 6013506 Query 364853 TTCC 364856 |||| Sbjct 6013505 TTCC 6013502 >seq2 Length=16759152 Score = 176 bits (194), Expect = 1e-38 Identities = 412/618 (67%), Gaps = 8/618 (1%) Strand=Plus/Minus Query 111327 ACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGA 111386 ||||| || ||||| |||||| || ||||| ||||| | ||||||| ||| || Sbjct 13736393 ACAACTAAAAAAACATTTTGGAAAGGTATTGTTGAAGAGTTATTGTGGTTCATTTCTGGT 13736334 Query 111387 AGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCA 111446 || || |||||||| ||| | || | || ||||||||||| | ||| ||| Sbjct 13736333 AGCACTAATGCAAAGGAATTAAGTGCTAGGGGGGTTAAAATTTGGGAAGCAAACGGAAGT 13736274 Query 111447 CGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 | || ||||| ||| |||| || || | ||||||| ||| | ||||| ||| Sbjct 13736273 AGAGAGTTTCTCGATAATCTTGGATTTACTGAAAGACAAGAAGGCGATTTGGGACCTGTT 13736214 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCACGACTCATATGAT 111566 || || ||||||||| | || ||||| || |||||| | | ||| | ||| Sbjct 13736213 TATGGTTTTCAATGGAGACATTTTGGAGCTACATACAAAGGCGTTGACGCCGATTATAGA 13736154 Query 111567 TCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCT 111626 | |||| ||||||||| | || ||||||||||| |||| ||| || ||| Sbjct 13736153 GGTGAAGGAATTGATCAATTGGCCCAAGTAATTGATCAAATAAAGACCAATCCTTTTTCA 13736094 Query 111627 CGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCA 111686 | | |||||| | ||||||||| ||| || | || ||||||| | || ||| Sbjct 13736093 AGAAGAATTATTTTATCTGCATGGAATCCATCTGATCTTGATAAAATGGTTTTGCCTCCA 13736034 Query 111687 TGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA--TGCCAAATGTATC 111744 |||||| | | || |||||||| || || || | || | ||||| |||||| Sbjct 13736033 TGTCATACTTTAGCTCAATTTTATGTTCAAGATGG--AGAATTAAGTTGCCATTTGTATC 13735976 Query 111745 AGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTA 111804 | || || ||| |||||||||||||||| ||||| ||||| ||| | || | | Sbjct 13735975 AACGTAGTGGGGATGTTGGTCTTGGTGTTCCATTTAACATTGCTTCATACTCTCTTTTAA 13735916 Query 111805 CTTGCTTAATCGCTCA--TTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGG 111862 || | || || | ||| ||| | | | |||||||| ||||| ||| || Sbjct 13735915 CTCATATGATTGCAAAAGTTTGTGGAATAGCTA--CAGGTGAATTTGTTCACACTATTGG 13735858 Query 111863 AGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACAGTTGAAGCGCAAACC 111922 |||||| ||| | |||| ||| |||||||||||||||||| || || | || |||| Sbjct 13735857 AGATGCTCATATATACAAAAATCACATTGATGCACTTAAACTTCAATTAACTCGTGAACC 13735798 Query 111923 ATACGATTTCCCAACGAT 111940 || | || ||||| || Sbjct 13735797 TTATCAATTTCCAACAAT 13735780 Score = 131 bits (144), Expect = 4e-25 Identities = 402/614 (65%), Gaps = 22/614 (4%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||||| | | ||||| ||| | || || ||||||||||||| || ||||| | || Sbjct 8584709 ATCAATGATAAAATTGTGGAAAGACCTCAATATATGTTAATGCGAGTAGCTATAGCAATT 8584768 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACA----TATAAGCTTCTAAGTGCTCGTGT 363545 ||| | ||| ||| | | || ||||| ||| |||| ||||| | || | Sbjct 8584769 CATAGAGAAGATATTGCTTCTGCTATTGAGACATATTTATATATGTCTAAAAAATGGTTT 8584828 Query 363546 ATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTC 363605 ||| || || | |||||| | | ||||| |||||| | | |||| | || || Sbjct 8584829 ATT----CATGCTTCCCCAACATTATTTAATGCAGGAACTTCTCGTGCACAATTATCGTC 8584884 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || ||| | ||| |||| || ||||| || || || || | |||||| | || | Sbjct 8584885 ATGTTTTTTATTAACAATGGCTGATGATTCTATTGAAGGAATTTATGACACTTTGAAACA 8584944 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG----TGTATCGATCCACAATGTTC 363721 |||||| | ||||| || ||| || |||||||| ||||| || || ||| Sbjct 8584945 ATGTGCTATAATTTCAAAATCTGCCGGAGGAATTGGATTAAGTATC--TCTGGAA--TTC 8585000 Query 363722 GTGC--ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCAT 363779 |||| ||||| || ||| || ||| |||| || ||||| | | || || Sbjct 8585001 GTGCTTCTGGAACATTT--ATTGCAGGAACAAATGGATCATCAAATGGTTTAATACCAAT 8585058 Query 363780 GCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 | | ||||| | | | | |||||| | || || || |||||||| || || || Sbjct 8585059 GTTACGTGTTTATAATAGTACTGCTCGTTATGTTGATCAGGGTGGTAATAAACGACCTGG 8585118 Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899 ||| ||||| || || | || || ||||| ||||| | || ||| | || | | Sbjct 8585119 GGCATTTGCAATCTACTTGGAACCATGGCATGCTGATATAATGGAATTTTTAGATTTAAG 8585178 Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959 |||||||| || ||| ||| | || |||||| | || |||| |||||||||| | Sbjct 8585179 AAAAAACACAGGTCCAGAAGAAGCAAGAGCTCGTGATTTATTTTATGGACTTTGGGTTCC 8585238 Query 363960 TGACCATTTTATGAAGCGCGTGGAGGCAGG-TAAGAATTGGTCACTCTTTTGCCCACACG 364018 || |||||||| || || || |||| | |||||||| | | || || | | Sbjct 8585239 AGATTTATTTATGAAACGTGTTGA-ACAGGATCTTCATTGGTCATTAATGTGTCCTTATG 8585297 Query 364019 AATGTCCAGGTCTT 364032 |||||||||||||| Sbjct 8585298 AATGTCCAGGTCTT 8585311 Score = 125 bits (138), Expect = 2e-23 Identities = 309/465 (66%), Gaps = 9/465 (2%) Strand=Plus/Plus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 ||||| ||||||| ||||| | |||||||| || ||||||||||| ||||| | | Sbjct 14764294 GAACGAGTTATTGCTTTTGCAGCTGTTGAAGGTATCTTCTTTTCTGGTTCATTTGCTTCC 14764353 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || |||||||| || ||||||| | ||||| || | || ||| ||||| || ||| Sbjct 14764354 ATATTTTGGCTGAAGAAACGTGGTTTGATGCCAGGATTGACACATTCCAATGAATTGATT 14764413 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668 |||||||||| | || ||||| || || | ||| | | | | || Sbjct 14764414 TCAAGAGATGAGGGATTACACCGTGATTTCGCCTGCCT--TAT----GTTTAGTTACCTT 14764467 Query 22669 CATAAACTTCCATATGA--AAC-TGTACTTGATATTATTACAAATGCAGTTGAACTTGAA 22725 | || |||| ||| ||| | || || ||||||| |||||||||||| ||||| Sbjct 14764468 GAAAACAAACCATCTGAAGAACGTATAAAAGAAATTATTAAAAATGCAGTTGATATTGAA 14764527 Query 22726 CGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATG 22785 || || || || | || || | | ||||| || || | | |||| Sbjct 14764528 AAGGAATACCTTACAGATGCTCTTCCTGTTGATATGATTGGAATGAACTCACGTTTAATG 14764587 Query 22786 AGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCAT 22845 ||||||||||| ||| ||| || || | | | || | ||| || | |||| | | Sbjct 14764588 TGTACATATATTGAATATGTAGCTGACCATTTGTTGGTGGAACTTAATTGTTCAAAACTT 14764647 Query 22846 TATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAAT 22905 ||||| || || || ||||| | |||| ||||||| |||| ||||| || ||| Sbjct 14764648 TATAATGTTAAGAACCCCTTTGATTTTATGGTTAATATTTCAATTGAGGGAAAAACAAAT 14764707 Query 22906 TTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950 ||||| || |||| |||| |||||| || ||| ||||||||| Sbjct 14764708 TTCTTTGAGAAAAAAGTTTCTGAATATCAGAAATTCGGTGTTATG 14764752 Score = 118 bits (130), Expect = 3e-21 Identities = 373/567 (66%), Gaps = 21/567 (4%) Strand=Plus/Plus Query 12639 TAATTGATATGCTCGAGTTGGGCCAATTCCTTTAATTGTTTTAGTATAGTCACATCCAGA 12698 ||| | ||||||| | || || ||||| | ||||| | |||||||||||| || Sbjct 3432976 TAAATCATATGCTTTTTTAGGACCTATTCCATGAATTGATGGAGTATAGTCACAACCGAG 3433035 Query 12699 AAGAATGCAAATCTCAATAAATTGATCCATTGTAATTCCCATGTCATTTAA---AATATT 12755 || ||| || ||||||||||| ||||| |||| ||||| || || || | |||| Sbjct 3433036 AATAATACAGTAGTCAATAAATTGTTCCATGGTAAAACCCATCTCTTTCAATGCAGTATT 3433095 Query 12756 TGGCAACGAGTATTCAACTGTTGGTTGCTTCTTTTGATCGGTGCTATTAATATGACGGAT 12815 | | | || || | || ||| ||| | || || | ||| |||||| | Sbjct 3433096 TAAATTAAATTCTTTAATAGGAATTTTCTTACTTTCA--GGCGCCAATAA-ATGACGAAG 3433152 Query 12816 TACATATGTTGAT-CCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTT 12874 || ||| || | ||||| || | | |||||| ||||| |||||||| ||| | ||| Sbjct 3433153 TAG-TATATTACTTCCAAAAGTTAATGCATCCATATCTTCTGTTGCTGTAGCAAAAACTT 3433211 Query 12875 TTCCTGTTTTTACATA-TGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAACGACC 12933 | || |||||||| | | | || ||| |||||| || ||||| ||||| | ||| Sbjct 3433212 TCCCC-TTTTTACACAATTCTGCGCATTGAGCTTCAGCTTCACACGGTGCATCAACATAT 3433270 Query 12934 GGAATGCCCATTAGGGTTAGCATCTTTTTTACT-TCTTCGCTATGTTCGCGAGTTGCGCG 12992 |||| ||||| || | | || | |||||| || ||| | ||||| || | | Sbjct 3433271 GGAACACCCATAAGTGACAACAA-TCTTTTACAATCATCGTTTTGTTCTTTTGTAACTCT 3433329 Query 12993 AACGCTTCTCTTTTCTTGTTTTTCGACTTCAGTTGCATCGTCGGTTAATTTTAGTTCGGA 13052 ||| ||| |||| ||| || | ||| | ||| | || || | ||| Sbjct 3433330 AACAAGTCTTCTTTCAAATTTCTCAATACCAGCAGTATCTCCTTTTGATATAGCTTCTTT 3433389 Query 13053 TAGTG---CTTGTGCCTG------TCGTTCATTTCGTTTATCAAGCTCTTTCTTTTTCAA 13103 || || ||| || | || ||| ||| |||||| | || | |||||| Sbjct 3433390 TAATGAAGCTTCAGCATCAGCTCTTCTCTCAGTTCTTTTATCCAATTCATGTGATTTCAA 3433449 Query 13104 AACAGGTGGCTTTCCGTCAAAAACATAGACGGGTTTAATTCCTGCTTCAATTAATCGAAT 13163 | | || ||||| || ||||||||||| || |||||||| || ||||| || | |||||| Sbjct 3433450 ATCTGGAGGCTTACCATCAAAAACATATACTGGTTTAATACCAGCTTCCATCATTCGAAT 3433509 Query 13164 GGTTCGGTAAAAAATACCTGTTAAATG 13190 ||||| || |||| ||| ||||||| Sbjct 3433510 TGTTCGATAGAAAAAACCATTTAAATG 3433536 Score = 91.5 bits (100), Expect = 4e-13 Identities = 167/240 (70%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 46894 ATAACCACCAACTGATCCAAATGATTTCGTAAAGGTTCCCATCATTACATCAATATTTGA 46953 |||||||||| ||| |||| ||||| || || ||||||||||| | ||||| || ||| Sbjct 12641320 ATAACCACCAGCTGCAGCAAAAGATTTGGTTAAAGTTCCCATCATAATATCAACATCTGA 12641379 Query 46954 AGTGTTAATATTGAAATGTTCAGCAACTCCACGGCCCGTTTGTCCAGTTGCGCCGATAGA 47013 || | || |||| ||| |||| || || || | || | || || ||| Sbjct 12641380 AGGATCCATTCCAAAATAATCAACAACACCTTTACCATTTGGACCCATAGCACCAATACT 12641439 Query 47014 ATGTGCTTCATCCAGGTATAAATGCGCACCGTACTTGGTTTTTACTTG-AACAATCTCAT 47072 |||||||||||||| |||||| ||| || || |||||| ||| ||||| || Sbjct 12641440 ATGTGCTTCATCCAAAAATAAATAAGCATTATA-TTTTTTTTTAATTGCTACAATAGCAG 12641498 Query 47073 TGAGATTGCAAAAAT--CTCCTTCCATTGAATAAATACCTTCAACAAATACAACAATCTT 47130 | || ||| ||| |||||||| ||||| || |||||||||| | || |||||| Sbjct 12641499 GTAAAT--CAACAATTGTACCTTCCATAGAATATATTCCTTCAACAATAATAAGAATCTT 12641556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351345605570