Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 205 2e-47
seq2 176 1e-38
>seq1
Length=11693564
Score = 205 bits (226), Expect = 2e-47
Identities = 964/1504 (64%), Gaps = 58/1504 (4%)
Strand=Plus/Minus
Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446
|||||| |||| |||||| | || || || |||| || ||||| | |||
Sbjct 6014981 TATTTT-GGATTTAAGACACTTGAACGTTCATATCTATTAAAAATAAATGGGAAAGTTGC 6014923
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
|||| | || || ||| | ||||||||||| || |||| || ||| | ||| || |
Sbjct 6014922 TGAAAGACCACAACATTTATTAATGCGTGTGGCAGTTGGAATTCATGGGGATGATATTAA 6014863
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC----GTGTATTCACGCACGCCACGC 363562
| | | |||||||||||| | | || || ||| ||| || || || ||| | |
Sbjct 6014862 TTCTGTTATTGAAACATAT--GACTATATGT-CTCAGAAGTG-GTTTACTCATGCCTCTC 6014807
Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAA 363621
||||| | | ||||| ||||| | ||||||| ||||||| || |||||| |||| |
Sbjct 6014806 CAACATTATTTAATGCAGGAACCAGACGTCCACAGCTGTCTTCGTG-TTTCTTACTAACA 6014748
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||| || ||||| || || ||||| | ||| || ||||| | ||||| | |||||
Sbjct 6014747 ATGTCTGATGATTCAATTGAAGGTATATATGATACTCTTAAACAATGTGCATTAATTTCA 6014688
Query 363682 AAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739
|| ||| ||||| ||||| || || | || | ||||||| | || |
Sbjct 6014687 AAATCTGCTGGCGGTATTGGATTGAAT--GTTCATTGTATTCGTGCTAATGGTTCTTTTA 6014630
Query 363740 TTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798
|| | || ||| || ||| || ||||| | | || ||| | | || ||| |||||
Sbjct 6014629 TTGGTGGTACAAATGG-TACATCTAATGGATTAATACCAATGTTGAGAGTTTTTAACAAT 6014571
Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858
|| || | || || ||||| || ||| || | || || |||||||| |||||
Sbjct 6014570 ACAGCACGCTATGTTGACCAAGGGGGAAATAAAAGACCTGGAGCATTTGCTATATATCTA 6014511
Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918
|| || ||||| || ||||| || ||| | || || |||||| || || ||
Sbjct 6014510 GAACCATGGCATGCTGACATTTTAGAATTTTTGGATCTTAAGAAAAATACAGGCCCTGAA 6014451
Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978
||| | || |||||| | || |||| |||||| || |||| |||||||| ||
Sbjct 6014450 GAAGAAAGAGCTCGTGATTTATTTTATGGTCTTTGGATTCCTGATTTATTTATGAAACGT 6014391
Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038
|| ||| || ||||||| | | ||||| ||||||||||| || ||| |||
Sbjct 6014390 GTAGAGAAAGACTCTTATTGGTCTTTGATGTGCCCCCACGAATGTCCTGGACTTGAGGAT 6014331
Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT-CG 364097
|||||||| | | || | |||| | ||||||||| || |||| | | |
Sbjct 6014330 ACTTGGGGTGAGGCTTTTGAGGAATTATATCACAAGTATGAAAATGA--GAAACGTTACA 6014273
Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG-------CAGATTG 364150
|| |||| | | ||| || || |||| || | |||| | || ||||
Sbjct 6014272 GAAAACAAATAAAGGCCAG-AGTTA---TTTGGCA--AAAGATTTGTGAAAGTCAAATTG 6014219
Query 364151 AGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGC 364210
| || |||||||| |||||| | ||||||||| || || || || || || ||
Sbjct 6014218 AAACCGGAACACCTTATATGGTTTACAAAGATCATTGTAATCGTAAAAGTAATCAACAAA 6014159
Query 364211 ACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCG 364270
| ||||| || ||| | || ||||||| || ||| ||||||| || || |
Sbjct 6014158 ATCTTGGAACCATTAAATGTTCAAATTTATGTACTGAAATTGTTGAATATTGTGCACCAG 6014099
Query 364271 ACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--AA----AAG 364324
| || ||| |||||||| || | || || || ||| ||||| || ||
Sbjct 6014098 ATGAAGTTGCTGTATGTAATCTAGGATCTATTGCTCTTAATAGATTTGTTGAAGTTGTAG 6014039
Query 364325 ATGGTA------CTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTTGC 364377
|||||| ||||| | | | || ||| ||| || ||| || || |||
Sbjct 6014038 ATGGTAAACCTGCTTTTAATTTCAAACAACTTCATGTTGT-TTCTAAAATTCTAACTAAA 6013980
Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437
||| | | || |||| || ||||||||||| | ||||||||| || |||
Sbjct 6013979 AATTTGAATAAAATTATTGATGTCAATTATTATCCTGTCCCTGAAGCCAGAAAATCAAAT 6013920
Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG---ATG 364494
||| | || || || |||||| ||||||| ||||| | ||||| | |||||| |||
Sbjct 6013919 ATGAGACACCGTCCAATTGGTATTGGTGTTCAGGGTTTAGCTGATGCATTTATGCTTATG 6013860
Query 364495 CTCAAGATGGCATTTGA-TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553
| | | | ||| | ||| |||| |||| | || |||||| ||| ||||||||
Sbjct 6013859 C----GTTATCCTTTCACTTCACCTGCCGCTAAAGAACTTAATAAGTTGATTTTTGAAAC 6013804
Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTC 364613
||| || || ||| || ||||| ||||| | || || | || ||
Sbjct 6013803 AATTTACCATGGAGCATTGGAAGCTTCATGTGAAGTAGCTGAACGTGATGGTCCTTATGA 6013744
Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673
|| ||||| || || || | || | || | | || | ||| | ||||||||||
Sbjct 6013743 GACATATGATGGATCTCCAGTATCAAAAGGTATTCTTCAATATGACATGTGGAATGTCAA 6013684
Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733
||| || |||| | ||||| || || | || || || |||||| |
Sbjct 6013683 ACCAAGTGATTTATGGGATTGGGAAACTTTAAAAGCAGACATTGCAAAACATGGT-GTAA 6013625
Query 364734 CAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792
|| | | | |||| || || ||||| || ||||| ||||||||||| || ||||| |
Sbjct 6013624 GAAATTCTTTATTACTTGCTCCAATGCCAACTGCTTCAACTGCACAGATTCTAGGAAATA 6013565
Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852
| || | | ||||| | ||| || |||| | | || |||||||| |||| ||
Sbjct 6013564 ATGAATCTATTGAACCATATACTTCTAACATTTACACTAGACGTGTTCTTTCAGGAG-AT 6013506
Query 364853 TTCC 364856
||||
Sbjct 6013505 TTCC 6013502
>seq2
Length=16759152
Score = 176 bits (194), Expect = 1e-38
Identities = 412/618 (67%), Gaps = 8/618 (1%)
Strand=Plus/Minus
Query 111327 ACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGA 111386
||||| || ||||| |||||| || ||||| ||||| | ||||||| ||| ||
Sbjct 13736393 ACAACTAAAAAAACATTTTGGAAAGGTATTGTTGAAGAGTTATTGTGGTTCATTTCTGGT 13736334
Query 111387 AGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCA 111446
|| || |||||||| ||| | || | || ||||||||||| | ||| |||
Sbjct 13736333 AGCACTAATGCAAAGGAATTAAGTGCTAGGGGGGTTAAAATTTGGGAAGCAAACGGAAGT 13736274
Query 111447 CGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506
| || ||||| ||| |||| || || | ||||||| ||| | ||||| |||
Sbjct 13736273 AGAGAGTTTCTCGATAATCTTGGATTTACTGAAAGACAAGAAGGCGATTTGGGACCTGTT 13736214
Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCACGACTCATATGAT 111566
|| || ||||||||| | || ||||| || |||||| | | ||| | |||
Sbjct 13736213 TATGGTTTTCAATGGAGACATTTTGGAGCTACATACAAAGGCGTTGACGCCGATTATAGA 13736154
Query 111567 TCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCT 111626
| |||| ||||||||| | || ||||||||||| |||| ||| || |||
Sbjct 13736153 GGTGAAGGAATTGATCAATTGGCCCAAGTAATTGATCAAATAAAGACCAATCCTTTTTCA 13736094
Query 111627 CGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCA 111686
| | |||||| | ||||||||| ||| || | || ||||||| | || |||
Sbjct 13736093 AGAAGAATTATTTTATCTGCATGGAATCCATCTGATCTTGATAAAATGGTTTTGCCTCCA 13736034
Query 111687 TGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA--TGCCAAATGTATC 111744
|||||| | | || |||||||| || || || | || | ||||| ||||||
Sbjct 13736033 TGTCATACTTTAGCTCAATTTTATGTTCAAGATGG--AGAATTAAGTTGCCATTTGTATC 13735976
Query 111745 AGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTA 111804
| || || ||| |||||||||||||||| ||||| ||||| ||| | || | |
Sbjct 13735975 AACGTAGTGGGGATGTTGGTCTTGGTGTTCCATTTAACATTGCTTCATACTCTCTTTTAA 13735916
Query 111805 CTTGCTTAATCGCTCA--TTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGG 111862
|| | || || | ||| ||| | | | |||||||| ||||| ||| ||
Sbjct 13735915 CTCATATGATTGCAAAAGTTTGTGGAATAGCTA--CAGGTGAATTTGTTCACACTATTGG 13735858
Query 111863 AGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACAGTTGAAGCGCAAACC 111922
|||||| ||| | |||| ||| |||||||||||||||||| || || | || ||||
Sbjct 13735857 AGATGCTCATATATACAAAAATCACATTGATGCACTTAAACTTCAATTAACTCGTGAACC 13735798
Query 111923 ATACGATTTCCCAACGAT 111940
|| | || ||||| ||
Sbjct 13735797 TTATCAATTTCCAACAAT 13735780
Score = 131 bits (144), Expect = 4e-25
Identities = 402/614 (65%), Gaps = 22/614 (4%)
Strand=Plus/Plus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
||||||| | | ||||| ||| | || || ||||||||||||| || ||||| | ||
Sbjct 8584709 ATCAATGATAAAATTGTGGAAAGACCTCAATATATGTTAATGCGAGTAGCTATAGCAATT 8584768
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACA----TATAAGCTTCTAAGTGCTCGTGT 363545
||| | ||| ||| | | || ||||| ||| |||| ||||| | || |
Sbjct 8584769 CATAGAGAAGATATTGCTTCTGCTATTGAGACATATTTATATATGTCTAAAAAATGGTTT 8584828
Query 363546 ATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTC 363605
||| || || | |||||| | | ||||| |||||| | | |||| | || ||
Sbjct 8584829 ATT----CATGCTTCCCCAACATTATTTAATGCAGGAACTTCTCGTGCACAATTATCGTC 8584884
Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| ||| | ||| |||| || ||||| || || || || | |||||| | || |
Sbjct 8584885 ATGTTTTTTATTAACAATGGCTGATGATTCTATTGAAGGAATTTATGACACTTTGAAACA 8584944
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG----TGTATCGATCCACAATGTTC 363721
|||||| | ||||| || ||| || |||||||| ||||| || || |||
Sbjct 8584945 ATGTGCTATAATTTCAAAATCTGCCGGAGGAATTGGATTAAGTATC--TCTGGAA--TTC 8585000
Query 363722 GTGC--ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCAT 363779
|||| ||||| || ||| || ||| |||| || ||||| | | || ||
Sbjct 8585001 GTGCTTCTGGAACATTT--ATTGCAGGAACAAATGGATCATCAAATGGTTTAATACCAAT 8585058
Query 363780 GCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839
| | ||||| | | | | |||||| | || || || |||||||| || || ||
Sbjct 8585059 GTTACGTGTTTATAATAGTACTGCTCGTTATGTTGATCAGGGTGGTAATAAACGACCTGG 8585118
Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899
||| ||||| || || | || || ||||| ||||| | || ||| | || | |
Sbjct 8585119 GGCATTTGCAATCTACTTGGAACCATGGCATGCTGATATAATGGAATTTTTAGATTTAAG 8585178
Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959
|||||||| || ||| ||| | || |||||| | || |||| |||||||||| |
Sbjct 8585179 AAAAAACACAGGTCCAGAAGAAGCAAGAGCTCGTGATTTATTTTATGGACTTTGGGTTCC 8585238
Query 363960 TGACCATTTTATGAAGCGCGTGGAGGCAGG-TAAGAATTGGTCACTCTTTTGCCCACACG 364018
|| |||||||| || || || |||| | |||||||| | | || || | |
Sbjct 8585239 AGATTTATTTATGAAACGTGTTGA-ACAGGATCTTCATTGGTCATTAATGTGTCCTTATG 8585297
Query 364019 AATGTCCAGGTCTT 364032
||||||||||||||
Sbjct 8585298 AATGTCCAGGTCTT 8585311
Score = 125 bits (138), Expect = 2e-23
Identities = 309/465 (66%), Gaps = 9/465 (2%)
Strand=Plus/Plus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
||||| ||||||| ||||| | |||||||| || ||||||||||| ||||| | |
Sbjct 14764294 GAACGAGTTATTGCTTTTGCAGCTGTTGAAGGTATCTTCTTTTCTGGTTCATTTGCTTCC 14764353
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| |||||||| || ||||||| | ||||| || | || ||| ||||| || |||
Sbjct 14764354 ATATTTTGGCTGAAGAAACGTGGTTTGATGCCAGGATTGACACATTCCAATGAATTGATT 14764413
Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668
|||||||||| | || ||||| || || | ||| | | | | ||
Sbjct 14764414 TCAAGAGATGAGGGATTACACCGTGATTTCGCCTGCCT--TAT----GTTTAGTTACCTT 14764467
Query 22669 CATAAACTTCCATATGA--AAC-TGTACTTGATATTATTACAAATGCAGTTGAACTTGAA 22725
| || |||| ||| ||| | || || ||||||| |||||||||||| |||||
Sbjct 14764468 GAAAACAAACCATCTGAAGAACGTATAAAAGAAATTATTAAAAATGCAGTTGATATTGAA 14764527
Query 22726 CGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATG 22785
|| || || || | || || | | ||||| || || | | ||||
Sbjct 14764528 AAGGAATACCTTACAGATGCTCTTCCTGTTGATATGATTGGAATGAACTCACGTTTAATG 14764587
Query 22786 AGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCAT 22845
||||||||||| ||| ||| || || | | | || | ||| || | |||| | |
Sbjct 14764588 TGTACATATATTGAATATGTAGCTGACCATTTGTTGGTGGAACTTAATTGTTCAAAACTT 14764647
Query 22846 TATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAAT 22905
||||| || || || ||||| | |||| ||||||| |||| ||||| || |||
Sbjct 14764648 TATAATGTTAAGAACCCCTTTGATTTTATGGTTAATATTTCAATTGAGGGAAAAACAAAT 14764707
Query 22906 TTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950
||||| || |||| |||| |||||| || ||| |||||||||
Sbjct 14764708 TTCTTTGAGAAAAAAGTTTCTGAATATCAGAAATTCGGTGTTATG 14764752
Score = 118 bits (130), Expect = 3e-21
Identities = 373/567 (66%), Gaps = 21/567 (4%)
Strand=Plus/Plus
Query 12639 TAATTGATATGCTCGAGTTGGGCCAATTCCTTTAATTGTTTTAGTATAGTCACATCCAGA 12698
||| | ||||||| | || || ||||| | ||||| | |||||||||||| ||
Sbjct 3432976 TAAATCATATGCTTTTTTAGGACCTATTCCATGAATTGATGGAGTATAGTCACAACCGAG 3433035
Query 12699 AAGAATGCAAATCTCAATAAATTGATCCATTGTAATTCCCATGTCATTTAA---AATATT 12755
|| ||| || ||||||||||| ||||| |||| ||||| || || || | ||||
Sbjct 3433036 AATAATACAGTAGTCAATAAATTGTTCCATGGTAAAACCCATCTCTTTCAATGCAGTATT 3433095
Query 12756 TGGCAACGAGTATTCAACTGTTGGTTGCTTCTTTTGATCGGTGCTATTAATATGACGGAT 12815
| | | || || | || ||| ||| | || || | ||| |||||| |
Sbjct 3433096 TAAATTAAATTCTTTAATAGGAATTTTCTTACTTTCA--GGCGCCAATAA-ATGACGAAG 3433152
Query 12816 TACATATGTTGAT-CCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTT 12874
|| ||| || | ||||| || | | |||||| ||||| |||||||| ||| | |||
Sbjct 3433153 TAG-TATATTACTTCCAAAAGTTAATGCATCCATATCTTCTGTTGCTGTAGCAAAAACTT 3433211
Query 12875 TTCCTGTTTTTACATA-TGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAACGACC 12933
| || |||||||| | | | || ||| |||||| || ||||| ||||| | |||
Sbjct 3433212 TCCCC-TTTTTACACAATTCTGCGCATTGAGCTTCAGCTTCACACGGTGCATCAACATAT 3433270
Query 12934 GGAATGCCCATTAGGGTTAGCATCTTTTTTACT-TCTTCGCTATGTTCGCGAGTTGCGCG 12992
|||| ||||| || | | || | |||||| || ||| | ||||| || | |
Sbjct 3433271 GGAACACCCATAAGTGACAACAA-TCTTTTACAATCATCGTTTTGTTCTTTTGTAACTCT 3433329
Query 12993 AACGCTTCTCTTTTCTTGTTTTTCGACTTCAGTTGCATCGTCGGTTAATTTTAGTTCGGA 13052
||| ||| |||| ||| || | ||| | ||| | || || | |||
Sbjct 3433330 AACAAGTCTTCTTTCAAATTTCTCAATACCAGCAGTATCTCCTTTTGATATAGCTTCTTT 3433389
Query 13053 TAGTG---CTTGTGCCTG------TCGTTCATTTCGTTTATCAAGCTCTTTCTTTTTCAA 13103
|| || ||| || | || ||| ||| |||||| | || | ||||||
Sbjct 3433390 TAATGAAGCTTCAGCATCAGCTCTTCTCTCAGTTCTTTTATCCAATTCATGTGATTTCAA 3433449
Query 13104 AACAGGTGGCTTTCCGTCAAAAACATAGACGGGTTTAATTCCTGCTTCAATTAATCGAAT 13163
| | || ||||| || ||||||||||| || |||||||| || ||||| || | ||||||
Sbjct 3433450 ATCTGGAGGCTTACCATCAAAAACATATACTGGTTTAATACCAGCTTCCATCATTCGAAT 3433509
Query 13164 GGTTCGGTAAAAAATACCTGTTAAATG 13190
||||| || |||| ||| |||||||
Sbjct 3433510 TGTTCGATAGAAAAAACCATTTAAATG 3433536
Score = 91.5 bits (100), Expect = 4e-13
Identities = 167/240 (70%), Gaps = 6/240 (3%)
Strand=Plus/Plus
Query 46894 ATAACCACCAACTGATCCAAATGATTTCGTAAAGGTTCCCATCATTACATCAATATTTGA 46953
|||||||||| ||| |||| ||||| || || ||||||||||| | ||||| || |||
Sbjct 12641320 ATAACCACCAGCTGCAGCAAAAGATTTGGTTAAAGTTCCCATCATAATATCAACATCTGA 12641379
Query 46954 AGTGTTAATATTGAAATGTTCAGCAACTCCACGGCCCGTTTGTCCAGTTGCGCCGATAGA 47013
|| | || |||| ||| |||| || || || | || | || || |||
Sbjct 12641380 AGGATCCATTCCAAAATAATCAACAACACCTTTACCATTTGGACCCATAGCACCAATACT 12641439
Query 47014 ATGTGCTTCATCCAGGTATAAATGCGCACCGTACTTGGTTTTTACTTG-AACAATCTCAT 47072
|||||||||||||| |||||| ||| || || |||||| ||| ||||| ||
Sbjct 12641440 ATGTGCTTCATCCAAAAATAAATAAGCATTATA-TTTTTTTTTAATTGCTACAATAGCAG 12641498
Query 47073 TGAGATTGCAAAAAT--CTCCTTCCATTGAATAAATACCTTCAACAAATACAACAATCTT 47130
| || ||| ||| |||||||| ||||| || |||||||||| | || ||||||
Sbjct 12641499 GTAAAT--CAACAATTGTACCTTCCATAGAATATATTCCTTCAACAATAATAAGAATCTT 12641556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351345605570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |