Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 677 0.0 seq2 614 7e-171 >seq1 Length=11693564 Score = 677 bits (750), Expect = 0.0 Identities = 1446/2141 (68%), Gaps = 63/2141 (3%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||| || | || || |||||||| ||||||| || | |||| | | |||| Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233 Query 61931 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 61987 ||||| ||| | ||| ||| || | || | ||| | ||| | ||||| Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290 Query 61988 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATT 62047 |||||| || || || || | || |||||||| | || || ||||| | ||| Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350 Query 62048 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 62104 ||||||| ||||||||||| | ||||||| ||||| | | || || || || Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410 Query 62105 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62164 |||||| || || || ||| |||| | | ||| ||| |||||| || || || Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470 Query 62165 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62224 ||| || |||| ||||| ||||| || | ||| || ||||| || | || | | |||| Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530 Query 62225 TAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62284 ||||| ||| ||||| ||||| | ||| ||||||||||| | ||| || |||||||| Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590 Query 62285 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 62342 ||||| ||||| || || | |||||| |||||| | ||| ||||| || || | Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648 Query 62343 CTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTA 62402 |||||| || |||||||| ||| | ||| ||| || ||| | Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708 Query 62403 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62458 ||||||| || ||||| | |||| ||||||| || || || || || ||| Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764 Query 62459 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62518 |||| |||||| || || ||||| || | ||||| ||||| || ||| |||||| Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824 Query 62519 AGATCTTGCGCTTCCAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 62576 || |||| || | ||| | | ||| |||||| | || ||||| || || |||| Sbjct 6013825 AGTTCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTA 6013882 Query 62577 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 62636 | || |||||||||||||| || || | |||||| |||| || || ||||| || | Sbjct 6013883 AACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGA 6013942 Query 62637 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGA--C 62691 |||||||||||| | ||| ||||||||||| | |||| | | |||| || || | Sbjct 6013943 CAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAAAC 6014000 Query 62692 CACATCCTTCAGTTTGAGA---AAATCAAATCGCCCATCTA----TT--ACAAACATGTT 62742 |||| |||||| | ||| || | ||||||| || ||||| | || Sbjct 6014001 AACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATT 6014060 Query 62743 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62802 | |||| |||| | |||||||| || || || |||| | | ||||| | || Sbjct 6014061 AAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAAT 6014120 Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862 ||||| || | ||| ||| || |||||||| | ||||||||||||||| || || Sbjct 6014121 TTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATT 6014180 Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922 ||| ||| || |||| || | || || || |||||||| ||| ||| |||| Sbjct 6014181 ACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTT 6014240 Query 62923 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC--TTTCGTA-TAG 62979 || ||| | |||| ||||||||| | ||| | | | |||||| |||| || | | Sbjct 6014241 TTGCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTG 6014298 Query 62980 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGG 63039 || ||| ||| || || | || |||||| || || |||||||||||||| | || Sbjct 6014299 TG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGG 6014357 Query 63040 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63099 |||||||| ||||| | ||| | || || ||||||||||| | |||||||||||| Sbjct 6014358 GCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCA 6014417 Query 63100 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159 |||| | ||||| ||| | | ||| | ||| || |||||||| || |||||||| Sbjct 6014418 AAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATC 6014477 Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 | || | | ||| |||| |||||| ||||| | ||||| || | ||||||| | Sbjct 6014478 CAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCT 6014537 Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279 ||| ||||| || || || | || | || || || ||| |||||||||||||||| || Sbjct 6014538 TTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTAT 6014597 Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339 | ||||| ||||||||||| || || ||| | ||| | ||||||||| | Sbjct 6014598 TAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATG 6014657 Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399 || | || || || || || ||| || |||||||| ||| |||| | ||||| Sbjct 6014658 AACATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATC 6014717 Query 63400 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459 ||| || || || || |||||| ||| | |||| ||||| ||||| || | Sbjct 6014718 ATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGG 6014777 Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA-AA 63518 ||| || ||||| ||||||||||| || ||||| || ||||||||||| || | ||| | Sbjct 6014778 ACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACAT 6014837 Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63578 ||| | || || |||||| | || | ||||| ||||||||| ||||| |||| Sbjct 6014838 ATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACAC 6014896 Query 63579 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63638 ||||||| | || || ||||||||| | | || |||||||| || | || || Sbjct 6014897 GCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAAC 6014956 Query 63639 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63698 ||| | || ||||| |||||||| | | ||| |||| | |||| ||| | | Sbjct 6014957 GTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAG 6015016 Query 63699 AGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT------ACTTGAAATAA 63752 | || |||||||| || ||| || | | | || | | |||| || | Sbjct 6015017 AATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTT---ATCA 6015070 Query 63753 TAGGAAAATGTTTCCCATTTTTAGGATTGAC-ATAGTTGAATAAATCCTCCATCACTTCA 63811 | || ||||| | | | | || || |||| |||||| |||| || ||| |||| Sbjct 6015071 TTGGCAAATG-TACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCT 6015129 Query 63812 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 63871 ||| ||| ||||||| ||| || | ||| || || || ||||| || ||||| || Sbjct 6015130 GAAAAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATA 6015189 Query 63872 GCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAAT 63931 |||||||| ||||| ||| || | | || | | ||| || || | | | || ||| Sbjct 6015190 GCATAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAAT 6015249 Query 63932 TCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTT 63972 || || |||| |||||||||||| | |||||||||||| || Sbjct 6015250 TCAACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 27521 TCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTA 27580 || || || | |||||||||| ||||||||||||| || || || | |||||||||| | Sbjct 581502 TCTTTAACTTCAGTTAATGATTTCCAATCCATATTTGCACTACCAATATAAATATGTTTT 581561 Query 27581 TTATCAGATATCCAAAATTTTGTATGAAGAACTCC 27615 | |||| ||||||||||||||||| | ||| || Sbjct 581562 TGATCAACAATCCAAAATTTTGTATGTAAAACACC 581596 >seq2 Length=16759152 Score = 614 bits (680), Expect = 7e-171 Identities = 1427/2128 (67%), Gaps = 55/2128 (3%) Strand=Plus/Minus Query 61868 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 61927 || || ||||| || | || ||| |||||||||||||||| || | ||||||| ||| Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 61928 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 61984 |||||||| ||| || | |||| | || | || || | | | | ||| Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361 Query 61985 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTT-GTGG 62043 ||| |||||| || || | |||| || ||||||||| ||||| ||||||| ||| Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302 Query 62044 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 62100 ||||||||| | ||||||||||| | | || |||| ||||| | | |||| || Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242 Query 62101 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 62159 |||||||||| || | | || || |||| | ||| | |||||||| | || Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183 Query 62160 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 62219 ||||| | | || ||||| | ||| || |||||||| |||||||| || |||| || Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123 Query 62220 GAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAG 62279 || || |||||| ||||| ||||| | ||| ||||| ||||| | |||||||| | Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063 Query 62280 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 62339 | ||||| || ||||| || || | ||||| ||| | |||||| | | | |||| Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003 Query 62340 TATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62399 | |||| | ||||| | ||| | ||| || | ||| | Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943 Query 62400 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62458 | ||||| || || || | | ||| | | |||| || || ||| | ||||| Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884 Query 62459 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62518 | | |||||| || || | |||||| | |||||| ||||| || || || |||| Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824 Query 62519 AGATCTTGCGCTTCCAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 62577 ||||||| ||||| | | | | ||| ||||| | | || | ||| | || || | Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765 Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637 ||||||||||||||| || || || | ||| | ||| || | ||||||| | Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705 Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 62694 |||||| |||||||||| ||||||||||| | |||||| |||||| |||| | || Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648 Query 62695 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT------------ACAAACATGTT 62742 ||| | || | ||| |||||| | | || |||||||| || Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588 Query 62743 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62802 | ||||| ||||| | ||||||||| || || || | | | |||||| || || Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528 Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862 ||||| || ||||| ||| | || ||||||||||||||||||||||| || || Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468 Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922 ||| ||| ||||||| || ||||| |||||||||||||||||||||| ||| Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408 Query 62923 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCTTTTCTCTTTCGTATAGT 62980 | ||| || | || ||| |||||| | ||| | | || ||||| |||| ||| Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350 Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040 |||| | | || || | || || || ||| || || || |||||||||| ||| Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290 Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100 ||||| || ||||| | || | | || ||||||||||| | ||| |||| |||| Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230 Query 63101 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63160 || | ||||| ||| | | ||| ||| || ||||| || ||| | | ||| Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170 Query 63161 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63220 | || |||| ||||||| |||||| ||||||||||| || || | | ||||| ||| Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110 Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280 || || || |||||||| | || | ||| || |||||||||| | |||||||| || Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050 Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTA 63340 | |||||| |||| ||||| || |||| ||| | ||||| |||||||| | Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990 Query 63341 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 63400 || || || ||||| || || ||| || |||| || ||| |||| || || ||| Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930 Query 63401 TAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459 || || || || ||| |||||| || |||||| || |||||| || | ||| Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871 Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG 63519 |||| |||||| ||||||||||| || || ||||| ||| |||||||||||| ||| | Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812 Query 63520 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63578 || || || ||||||||||| || | ||||| | ||||||| ||| || || | Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752 Query 63579 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63638 |||||||||| | ||||||||||| || || || | || ||| | || || || ||| Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692 Query 63639 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63697 ||| | ||| |||| |||||||| || || |||| ||| ||| | |||||| Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633 Query 63698 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT--GAAATAATAG 63755 |||| ||||| || ||| | || || | ||| || | ||| | || | || Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575 Query 63756 GAAAATGTTTCCCATT---TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCAC 63812 || |||||| || | ||| | || ||| || ||||||| | ||| |||||| Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518 Query 63813 TAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGG 63872 |||| ||||| |||| ||| || | ||||| | ||| || | ||| |||| | Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458 Query 63873 CATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATT 63932 ||||||| ||||||| | | | || || ||||| | |||| | || | || Sbjct 8584457 CATAATCAGGATGTTCAACAAATTTACTTGCAGCAATTTCAGAAGCCAAGTTATCAAGTT 8584398 Query 63933 CTACCGTTGTTACACCATTATATATTCC 63960 | || || || ||||| ||||| | ||| Sbjct 8584397 CAACTGTAGTAACACCCTTATAAAATCC 8584370 Score = 273 bits (302), Expect = 3e-68 Identities = 528/772 (68%), Gaps = 23/772 (3%) Strand=Plus/Minus Query 32346 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405 || ||| ||||||||| || | ||| || |||||| || ||| || || ||||| Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704 Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtt 32465 ||||| || || | ||| ||||| |||| ||||| || || || |||||||||||| | Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644 Query 32466 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 32525 ||| | | | ||| | ||| || || ||| |||| |||||||| || | Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587 Query 32526 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 32582 ||| || | |||||||| || | | ||| |||||||| | ||||| |||| | | Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527 Query 32583 TCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGT--GGATACA 32640 |||||| || || | | | ||||| | ||| ||||||| ||| | | || Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTTTGTTTTCA 14764467 Query 32641 A--TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAAT 32698 | ||| | |||||| | || |||||||| | ||||| ||||| ||||| ||| Sbjct 14764466 AGGTAACT----AAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAAT 14764411 Query 32699 TAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA 32758 ||||| |||||| || | ||| ||||| | ||||| || || |||||||||||||| Sbjct 14764410 CAATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGA 14764351 Query 32759 CGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 32818 |||||||| ||||||||||| || ||||| || || ||||| ||||||| || ||||| Sbjct 14764350 AGCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCC 14764291 Query 32819 ATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACA 32875 | || || | ||| ||||| || ||||||||| || || ||| | | | | Sbjct 14764290 AAAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAA 14764231 Query 32876 AGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGT 32935 || | |||| ||||||||| || | || |||| | | | || | ||| || Sbjct 14764230 TGGAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGT 14764171 Query 32936 ATCAATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCC 32992 || || ||| | |||||| || ||||| ||||| ||||| ||||| || || Sbjct 14764170 TTCGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACC 14764114 Query 32993 GTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTC 33052 |||||| | | ||||||| ||| || |||||| || |||||| || | ||||| || Sbjct 14764113 ATAGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTC 14764054 Query 33053 ATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 ||| || || || ||| || ||||| || || || ||| || |||||| Sbjct 14764053 ATTAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630930746000