Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 677 0.0
seq2 614 7e-171
>seq1
Length=11693564
Score = 677 bits (750), Expect = 0.0
Identities = 1446/2141 (68%), Gaps = 63/2141 (3%)
Strand=Plus/Plus
Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930
|| ||||| || | || || |||||||| ||||||| || | |||| | | ||||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 61931 TGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGA 61987
||||| ||| | ||| ||| || | || | ||| | ||| | |||||
Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290
Query 61988 CTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATT 62047
|||||| || || || || | || |||||||| | || || ||||| | |||
Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350
Query 62048 TCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATG 62104
||||||| ||||||||||| | ||||||| ||||| | | || || || ||
Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410
Query 62105 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62164
|||||| || || || ||| |||| | | ||| ||| |||||| || || ||
Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470
Query 62165 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62224
||| || |||| ||||| ||||| || | ||| || ||||| || | || | | ||||
Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530
Query 62225 TAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62284
||||| ||| ||||| ||||| | ||| ||||||||||| | ||| || ||||||||
Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590
Query 62285 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTAT 62342
||||| ||||| || || | |||||| |||||| | ||| ||||| || || |
Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACC--ATGTTTTGCAATGTCTG 6013648
Query 62343 CTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTA 62402
|||||| || |||||||| ||| | ||| ||| || ||| |
Sbjct 6013649 CTTTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAA 6013708
Query 62403 GAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62458
||||||| || ||||| | |||| ||||||| || || || || || |||
Sbjct 6013709 GAATACCTTTTGATACTGGAG----ATCCATCATATGTCTCATAAGGACCATCACGTTCA 6013764
Query 62459 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62518
|||| |||||| || || ||||| || | ||||| ||||| || ||| ||||||
Sbjct 6013765 GCTACTTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTA 6013824
Query 62519 AGATCTTGCGCTTCCAGGCTA--TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 62576
|| |||| || | ||| | | ||| |||||| | || ||||| || || ||||
Sbjct 6013825 AGTTCTTTAGCGGC-AGGTGAAGTGAAA-GGATAACGCATAAGCATAAATGCATCAGCTA 6013882
Query 62577 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 62636
| || |||||||||||||| || || | |||||| |||| || || ||||| || |
Sbjct 6013883 AACCCTGAACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGA 6013942
Query 62637 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGA--C 62691
|||||||||||| | ||| ||||||||||| | |||| | | |||| || || |
Sbjct 6013943 CAGGATAATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATT--TTAGAAAC 6014000
Query 62692 CACATCCTTCAGTTTGAGA---AAATCAAATCGCCCATCTA----TT--ACAAACATGTT 62742
|||| |||||| | ||| || | ||||||| || ||||| | ||
Sbjct 6014001 AACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATT 6014060
Query 62743 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62802
| |||| |||| | |||||||| || || || |||| | | ||||| | ||
Sbjct 6014061 AAGAGCAATAGATCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAAT 6014120
Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862
||||| || | ||| ||| || |||||||| | ||||||||||||||| || ||
Sbjct 6014121 TTCAGTACATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATT 6014180
Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922
||| ||| || |||| || | || || || |||||||| ||| ||| ||||
Sbjct 6014181 ACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTT 6014240
Query 62923 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC--TTTCGTA-TAG 62979
|| ||| | |||| ||||||||| | ||| | | | |||||| |||| || | |
Sbjct 6014241 TTGCCAAATAACTCTGGCCTTTATTT--GTTTTCTGTAACGTTTCTCATTTTCATACTTG 6014298
Query 62980 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGG 63039
|| ||| ||| || || | || |||||| || || |||||||||||||| | ||
Sbjct 6014299 TG-ATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGG 6014357
Query 63040 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63099
|||||||| ||||| | ||| | || || ||||||||||| | ||||||||||||
Sbjct 6014358 GCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCA 6014417
Query 63100 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159
|||| | ||||| ||| | | ||| | ||| || |||||||| || ||||||||
Sbjct 6014418 AAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATC 6014477
Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219
| || | | ||| |||| |||||| ||||| | ||||| || | ||||||| |
Sbjct 6014478 CAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCT 6014537
Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279
||| ||||| || || || | || | || || || ||| |||||||||||||||| ||
Sbjct 6014538 TTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTAT 6014597
Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339
| ||||| ||||||||||| || || ||| | ||| | ||||||||| |
Sbjct 6014598 TAATCCATTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATG 6014657
Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399
|| | || || || || || ||| || |||||||| ||| |||| | |||||
Sbjct 6014658 AACATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATC 6014717
Query 63400 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459
||| || || || || |||||| ||| | |||| ||||| ||||| || |
Sbjct 6014718 ATATATACCTTCAATTGAATCATCAGACATTGTTAGTAAGAAACACGAAGACAGCTGTGG 6014777
Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA-AA 63518
||| || ||||| ||||||||||| || ||||| || ||||||||||| || | ||| |
Sbjct 6014778 ACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACAT 6014837
Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63578
||| | || || |||||| | || | ||||| ||||||||| ||||| ||||
Sbjct 6014838 ATAG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACAC 6014896
Query 63579 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63638
||||||| | || || ||||||||| | | || |||||||| || | || ||
Sbjct 6014897 GCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAAC 6014956
Query 63639 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63698
||| | || ||||| |||||||| | | ||| |||| | |||| ||| | |
Sbjct 6014957 GTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAG 6015016
Query 63699 AGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT------ACTTGAAATAA 63752
| || |||||||| || ||| || | | | || | | |||| || |
Sbjct 6015017 AATTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTT---ATCA 6015070
Query 63753 TAGGAAAATGTTTCCCATTTTTAGGATTGAC-ATAGTTGAATAAATCCTCCATCACTTCA 63811
| || ||||| | | | | || || |||| |||||| |||| || ||| ||||
Sbjct 6015071 TTGGCAAATG-TACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCT 6015129
Query 63812 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 63871
||| ||| ||||||| ||| || | ||| || || || ||||| || ||||| ||
Sbjct 6015130 GAAAAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATA 6015189
Query 63872 GCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAAT 63931
|||||||| ||||| ||| || | | || | | ||| || || | | | || |||
Sbjct 6015190 GCATAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAAT 6015249
Query 63932 TCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTT 63972
|| || |||| |||||||||||| | |||||||||||| ||
Sbjct 6015250 TCAACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
Score = 86.0 bits (94), Expect = 8e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 27521 TCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTA 27580
|| || || | |||||||||| ||||||||||||| || || || | |||||||||| |
Sbjct 581502 TCTTTAACTTCAGTTAATGATTTCCAATCCATATTTGCACTACCAATATAAATATGTTTT 581561
Query 27581 TTATCAGATATCCAAAATTTTGTATGAAGAACTCC 27615
| |||| ||||||||||||||||| | ||| ||
Sbjct 581562 TGATCAACAATCCAAAATTTTGTATGTAAAACACC 581596
>seq2
Length=16759152
Score = 614 bits (680), Expect = 7e-171
Identities = 1427/2128 (67%), Gaps = 55/2128 (3%)
Strand=Plus/Minus
Query 61868 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAA 61927
|| || ||||| || | || ||| |||||||||||||||| || | ||||||| |||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 61928 AAATGCAT---ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 61984
|||||||| ||| || | |||| | || | || || | | | | |||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 61985 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTT-GTGG 62043
||| |||||| || || | |||| || ||||||||| ||||| ||||||| |||
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAAT-GTCTTTTTGTGA 8586302
Query 62044 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 62100
||||||||| | ||||||||||| | | || |||| ||||| | | |||| ||
Sbjct 8586301 AATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTG 8586242
Query 62101 AATGGATCCACCATCTGCCATAATCCTATTCT-TGATCTCATCATTCCATAATTTTCTCT 62159
|||||||||| || | | || || |||| | ||| | |||||||| | ||
Sbjct 8586241 AATGGATCCATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAG 8586183
Query 62160 CGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCC 62219
||||| | | || ||||| | ||| || |||||||| |||||||| || |||| ||
Sbjct 8586182 AAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCC 8586123
Query 62220 GAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAG 62279
|| || |||||| ||||| ||||| | ||| ||||| ||||| | |||||||| |
Sbjct 8586122 TTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATG 8586063
Query 62280 TTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTT 62339
| ||||| || ||||| || || | ||||| ||| | |||||| | | | ||||
Sbjct 8586062 TAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTT 8586003
Query 62340 TATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62399
| |||| | ||||| | ||| | ||| || | ||| |
Sbjct 8586002 CTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943
Query 62400 GTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCA 62458
| ||||| || || || | | ||| | | |||| || || ||| | |||||
Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGA-ATGTTTCATAACATCCATACTTCTTT 8585884
Query 62459 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62518
| | |||||| || || | |||||| | |||||| ||||| || || || ||||
Sbjct 8585883 GACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTA 8585824
Query 62519 AGATCTTGCGCTTCCAG-GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 62577
||||||| ||||| | | | | ||| ||||| | | || | ||| | || || |
Sbjct 8585823 AGATCTTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765
Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637
||||||||||||||| || || || | ||| | ||| || | ||||||| |
Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705
Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCAC 62694
|||||| |||||||||| ||||||||||| | |||||| |||||| |||| | ||
Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATT--TTTGTC-AC 8585648
Query 62695 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT------------ACAAACATGTT 62742
||| | || | ||| |||||| | | || |||||||| ||
Sbjct 8585647 ATCATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATT 8585588
Query 62743 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62802
| ||||| ||||| | ||||||||| || || || | | | |||||| || ||
Sbjct 8585587 AAGTGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAAT 8585528
Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862
||||| || ||||| ||| | || ||||||||||||||||||||||| || ||
Sbjct 8585527 TTCAGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATT 8585468
Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922
||| ||| ||||||| || ||||| |||||||||||||||||||||| |||
Sbjct 8585467 ACAATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTT 8585408
Query 62923 TTTCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCTTTTCTCTTTCGTATAGT 62980
| ||| || | || ||| |||||| | ||| | | || ||||| |||| |||
Sbjct 8585407 CTGCCAAACAAATCTAGCTTTTATTT--GCTTTCGGAACCTTTTTTCATTTTCATATTTA 8585350
Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040
|||| | | || || | || || || ||| || || || |||||||||| |||
Sbjct 8585349 ATATAAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGA 8585290
Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100
||||| || ||||| | || | | || ||||||||||| | ||| |||| ||||
Sbjct 8585289 CACATTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAA 8585230
Query 63101 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63160
|| | ||||| ||| | | ||| ||| || ||||| || ||| | | |||
Sbjct 8585229 AGTCCATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCT 8585170
Query 63161 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63220
| || |||| ||||||| |||||| ||||||||||| || || | | ||||| |||
Sbjct 8585169 AAAAATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGT 8585110
Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280
|| || || |||||||| | || | ||| || |||||||||| | |||||||| ||
Sbjct 8585109 TTATTACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATT 8585050
Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTA 63340
| |||||| |||| ||||| || |||| ||| | ||||| |||||||| |
Sbjct 8585049 AAACCATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAG 8584990
Query 63341 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 63400
|| || || ||||| || || ||| || |||| || ||| |||| || || |||
Sbjct 8584989 ATACTTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCA 8584930
Query 63401 TAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459
|| || || || ||| |||||| || |||||| || |||||| || | |||
Sbjct 8584929 TAAATTCCTTCAATAGAATCATCAGCCATTGTTAA-TAAAAAACATGACGATAATTGTGC 8584871
Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG 63519
|||| |||||| ||||||||||| || || ||||| ||| |||||||||||| ||| |
Sbjct 8584870 ACGAGAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA- 8584812
Query 63520 TAGAT-TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63578
|| || || ||||||||||| || | ||||| | ||||||| ||| || || |
Sbjct 8584811 TATATAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTC 8584752
Query 63579 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63638
|||||||||| | ||||||||||| || || || | || ||| | || || || |||
Sbjct 8584751 GCATTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATC 8584692
Query 63639 TTTCCAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63697
||| | ||| |||| |||||||| || || |||| ||| ||| | ||||||
Sbjct 8584691 GTTCTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACT 8584633
Query 63698 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT--GAAATAATAG 63755
|||| ||||| || ||| | || || | ||| || | ||| | || | ||
Sbjct 8584632 GAGTCAAGTTTTATTGAATGTTTCTGAA-TAATTTCAT-TTATTTCTTTAGTTATCAAAG 8584575
Query 63756 GAAAATGTTTCCCATT---TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCAC 63812
|| |||||| || | ||| | || ||| || ||||||| | ||| ||||||
Sbjct 8584574 GACAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAG 8584518
Query 63813 TAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGG 63872
|||| ||||| |||| ||| || | ||||| | ||| || | ||| |||| |
Sbjct 8584517 AAAATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTT 8584458
Query 63873 CATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATT 63932
||||||| ||||||| | | | || || ||||| | |||| | || | ||
Sbjct 8584457 CATAATCAGGATGTTCAACAAATTTACTTGCAGCAATTTCAGAAGCCAAGTTATCAAGTT 8584398
Query 63933 CTACCGTTGTTACACCATTATATATTCC 63960
| || || || ||||| ||||| | |||
Sbjct 8584397 CAACTGTAGTAACACCCTTATAAAATCC 8584370
Score = 273 bits (302), Expect = 3e-68
Identities = 528/772 (68%), Gaps = 23/772 (3%)
Strand=Plus/Minus
Query 32346 TCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405
|| ||| ||||||||| || | ||| || |||||| || ||| || || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtt 32465
||||| || || | ||| ||||| |||| ||||| || || || |||||||||||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 32466 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 32525
||| | | | ||| | ||| || || ||| |||| |||||||| || |
Sbjct 14764643 TTTGAACAATTAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-C 14764587
Query 32526 ATTTCAC---AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 32582
||| || | |||||||| || | | ||| |||||||| | ||||| |||| | |
Sbjct 14764586 ATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTT 14764527
Query 32583 TCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGT--GGATACA 32640
|||||| || || | | | ||||| | ||| ||||||| ||| | | ||
Sbjct 14764526 TCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTTTGTTTTCA 14764467
Query 32641 A--TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAAT 32698
| ||| | |||||| | || |||||||| | ||||| ||||| ||||| |||
Sbjct 14764466 AGGTAACT----AAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAAT 14764411
Query 32699 TAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA 32758
||||| |||||| || | ||| ||||| | ||||| || || ||||||||||||||
Sbjct 14764410 CAATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGA 14764351
Query 32759 CGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 32818
|||||||| ||||||||||| || ||||| || || ||||| ||||||| || |||||
Sbjct 14764350 AGCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCC 14764291
Query 32819 ATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACA 32875
| || || | ||| ||||| || ||||||||| || || ||| | | | |
Sbjct 14764290 AAAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAA 14764231
Query 32876 AGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGT 32935
|| | |||| ||||||||| || | || |||| | | | || | ||| ||
Sbjct 14764230 TGGAAACTCATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGT 14764171
Query 32936 ATCAATCAAAAGACT---ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCC 32992
|| || ||| | |||||| || ||||| ||||| ||||| ||||| || ||
Sbjct 14764170 TTCGAT---AAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACC 14764114
Query 32993 GTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTC 33052
|||||| | | ||||||| ||| || |||||| || |||||| || | ||||| ||
Sbjct 14764113 ATAGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTC 14764054
Query 33053 ATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104
||| || || || ||| || ||||| || || || ||| || ||||||
Sbjct 14764053 ATTAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAA 14764002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630930746000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |