Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 847 0.0
seq1 747 0.0
>seq2
Length=16759152
Score = 847 bits (938), Expect = 0.0
Identities = 1326/1897 (70%), Gaps = 62/1897 (3%)
Strand=Plus/Minus
Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032
||| || ||| |||| || | | ||| |||| ||| |||| |||||||||||| ||
Sbjct 8586505 TTTATCAACACTAAATTTTACAGCATTTGAAGCTGGTTTAGTTCTTAAATAATACATTCC 8586446
Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092
|| ||||| || |||||||||| |||||||| | | || || |||| | ||
Sbjct 8586445 CGTTTTTAAGCCACGTTTCCATCCATAAAAATGCATTGAACTACATATACCATAAGTTGG 8586386
Query 47093 TT--CTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCT 47150
|| || | ||| || | |||| |||||| ||||||||||| | || | ||||||
Sbjct 8586385 TTTACTTAGATA--AAGACTAAGTGATTGAGATTGATCAATAAAAGGCCCCCGATCAGCA 8586328
Query 47151 GCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATG 47210
||||| | | ||| | |||||| || |||||||| |||||||||| || || |||
Sbjct 8586327 GCCATTCCAATAATGTCTTTTTGTGAAATTTCCCATACAGTTTTATAAAGTTCTTGGATG 8586268
Query 47211 TCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataattttgtttttt 47267
|||| ||| | || || |||||||||| ||||| ||||| || ||||| || |
Sbjct 8586267 TCTTTTGGAATATCAGGTATATTTTGAATGGATCCATTATTTTCAATTATTTTATTGAGT 8586208
Query 47268 aat---tcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACA 47324
||| ||||| ||||| || | | |||| || |||||||| ||| |||
Sbjct 8586207 AATCCTTCATT---CCAAATATTAAGAGAAATTAAATCACGTAGAAGATGAGTATTTACA 8586151
Query 47325 ATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATA 47384
| |||||| |||||||||| |||| | ||||||||||| ||||||||||| |||
Sbjct 8586150 ACTTGAAAATCTCCAGATAAAACTCGCCTTGTATATATATTAGAAGTATATGGTTCAATA 8586091
Query 47385 GATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAG 47444
|||||||| ||||||| |||||||| || |||||||||||||| | |||| ||||||
Sbjct 8586090 GATTCATTGTTTCCAAGAATTTGAGATGTAGATGCTGTAGGCATTGGAGCAATTAATAAT 8586031
Query 47445 CTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCT 47504
||| | | ||| | | || | | ||| ||||| | |||
Sbjct 8586030 GAATTGCGAAGACCAAAACGTATAATTTCTTGCTTTAAAATATCCCATTCCCATAAATCA 8585971
Query 47505 GATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTA 47564
||||| ||||||||| | |||||| |||||||||||||| | |||||| | ||
Sbjct 8585970 CTTGGAATAACATTCCACATATCATACTGAAGAATTCCTTTGGATGCTGGAGAATCTTTG 8585911
Query 47565 TATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAA 47624
|||||| |||| || || || | | |||||| ||||| | ||||| || |
Sbjct 8585910 AATGTTTCATAACATCCATACTTCTTTGACAATTCACAGGAAGCTTCAAGTGCACCATGA 8585851
Query 47625 TATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATAN 47684
|| || |||||||| |||||||| || |||| | ||||||| |||| ||||||||
Sbjct 8585850 TAAATAGTTTCAAAAATTTTTATATTAAGATCTTTAGCTTCTGGTGATGTGAAAGGATAC 8585791
Query 47685 NNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTT 47744
|||||||| || | ||||||||||||||| |||||||| | ||| |
Sbjct 8585790 CTCATAAGCAAAAATGTATCAGCAAGTCCTTGAACACCAATTCCAATTGGACGATGCTTA 8585731
Query 47745 TTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGA 47804
||| || || ||||||| || |||||| || ||||| ||||||||||||| |
Sbjct 8585730 AGATTTGATAAACGAGCTTCTTCTAGTGGATAAAAATTAATATCAATAATTTTATTTAAA 8585671
Query 47805 NNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTAT---------TAAAATCAAACTT- 47854
||||||| | | | | || |||| ||||| |
Sbjct 8585670 TTTCTTGTT---------ACAATTTTTGTCACATCATGAAGCATTTTAAAGTCAAATGTA 8585620
Query 47855 -GTTATTTAT----------AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACA 47903
||| ||| | ||||||| |||||||||| || ||||||| |||||| |||
Sbjct 8585619 GGTTTTTTTTCTTTTATAACAACAAACATATTAAGTGCAATTGATGCTAAATTACAAACA 8585560
Query 47904 GCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATA 47963
|| || || ||||| | |||||| || ||||||| ||||||||| |||| | ||
Sbjct 8585559 GCAACTTCGCTTGGAGAACAATATTGAATAATTTCAGTACATAGATTTGAACATCTAATC 8585500
Query 47964 GTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGT 48023
|| || |||||||| |||||| | ||||| || || |||| |||| | ||
Sbjct 8585499 GTTCCTAAATTTTGTTGATTACTTTTACGATTACAATGATCTTTATAAACCATATATGGA 8585440
Query 48024 GTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACA 48083
| |||||||| |||||||||||| || | ||||||| ||||| |||||
Sbjct 8585439 ATACCAGTTTCAATCTGAGATTCACAAATTTTCTGCCAAACAAATCTAGCTTTTATTT-- 8585382
Query 48084 GCTCTAG---CTTTATTATCATGTTCGTATTTAGTATATAACTTC-TCAAATTCATCCCC 48139
||| | | | || || |||| ||| |||||| |||| || ||| ||||||| ||| ||
Sbjct 8585381 GCTTTCGGAACCTTTTT-TCATTTTCATATTTAATATA-AAGTTCATCAAATTTATCACC 8585324
Query 48140 ATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATT 48199
| | |||||| | || |||||||||| ||||||||| |||||||||| ||| |
Sbjct 8585323 AAAACAATTATCAAGACCTGGACATTCATAAGGACACATTAATGACCAATGAAGATCCTG 8585264
Query 48200 TTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCT 48259
|| || | ||||||||| |||||| | |||||| | ||||||||| | || |||
Sbjct 8585263 TTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTCCATAAAATAAATCACGAGCTCT 8585204
Query 48260 TAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCA 48319
| |||||| || | || || | | || | ||| ||||||||||||||||||||
Sbjct 8585203 TGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAAATTCCATTATATCAGCATGCCA 8585144
Query 48320 TGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCT 48379
|||||| || || ||||| | | | || |||||||||||||| || ||||| | ||| |
Sbjct 8585143 TGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTATTACCACCCTGATCAACATAACG 8585084
Query 48380 GGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCC 48439
|||||| | |||||||| | ||||||||| | | |||||||||| ||||| |||||
Sbjct 8585083 AGCAGTACTATTATAAACACGTAACATTGGTATTAAACCATTTGATGATCCATTTGTTCC 8585024
Query 48440 CGAAATATAACTTCCACTAGCTCTTATATTAC---TAATTGAAATACCTATACCACCTGC 48496
| |||| | ||||| ||| | || | || || ||| || || || || ||
Sbjct 8585023 TGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATACTT--AAT-CCAATTCCTCCGGC 8584967
Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556
||| || |||| |||||| |||| | || |||||||||||||| ||| ||||||
Sbjct 8584966 AGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAATTCCTTCAATAGAATCATC 8584907
Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616
||| |||||| |||||| || | ||| | | || ||||||||| |||||||||
Sbjct 8584906 AGCCATTGTTAATAAAAAACATGACGATAATTGTGCACGAGAAGTTCCTGCATTAAATAA 8584847
Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676
|||||| || ||||||||||||||||| | || | || |||||| |||||| ||||
Sbjct 8584846 TGTTGGGGAAGCATGAATAAACCATTTTTTAGACATATATAAATATGTCTCAATAGCAGA 8584787
Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736
| | ||||| | ||| || |||||| ||| ||||||||||||||||||||||||||
Sbjct 8584786 AGCAATATCTTCTCTATGAATTGCTATAGCTACTCGCATTAACATATATTGAGGTCTTTC 8584727
Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796
|||||||| | ||| ||| | || | ||||||| ||| | |||| |||| ||||||||
Sbjct 8584726 CACAATTTTATCATTGATTCTTAATAAATATGATCGTTCTAGTGTTCTAAATCCAAAATA 8584667
Query 48797 -GTTGTATGAAAAGTCGTTATCATT---AATAATTGA 48829
|| || |||| || || ||||| ||||| |||
Sbjct 8584666 TGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGA 8584631
Score = 356 bits (394), Expect = 3e-93
Identities = 563/801 (70%), Gaps = 12/801 (1%)
Strand=Plus/Minus
Query 18613 TAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTT 18672
|| ||||| ||||||| | |||| | ||||||| | | ||| || || | |||
Sbjct 14764796 TAGAAATCGGCATCCAATGTAAAAACACGTTCTTCATCTGTAGACATAACACCGAATTTC 14764737
Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732
|||||||| | |||| |||| ||||||||||| ||||||||||| | ||| ||| ||
Sbjct 14764736 TGATATTCAGAAACTTTTTTCTCAAAGAAATTTGTTTTTCCCTCAATTGAAATATTAACC 14764677
Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttG-AATCCTAA-TTCTAATAGTA 18790
||||||||||| || || || |||||||| | |||| ||| ||| ||| | | |
Sbjct 14764676 ATAAAATCAAAGGGGTTCTTAACATTATAAAGTTTTGAACAAT--TAAGTTCCACCAACA 14764619
Query 18791 GTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATT 18850
|| |||||| ||| ||||||||| ||| | | | |||||||| || | |
Sbjct 14764618 AATGGTCAGCTACATATTCAATATATGTACACATTAAACGTGAGTTCATTCCAATCATAT 14764559
Query 18851 TAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAG 18910
|||||| || ||||||||||| |||| | ||| |||| ||||| | | |||||
Sbjct 14764558 CAACAGGAAGAGCATCTGTAAGGTATTCCTTTTCAATATCAACTGCATTTTTAATAATTT 14764499
Query 18911 ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAAT 18970
| | | |||||| || || | ||| | ||||||| | || || ||||
Sbjct 14764498 CTTTTATACGTTCTTCAGATGGTTTGTTTTCAAGGTAACTAAACATAAGGCAGGCGAAAT 14764439
Query 18971 CACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCA 19030
||| |||| |||||| ||||| ||||||||||| ||| ||| || || |||||||
Sbjct 14764438 CACGGTGTAATCCCTCATCTCTTGAAATCAATTCATTGGAATGTGTCAATCCTGGCATCA 14764379
Query 19031 GTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTA 19090
|| | ||| || | ||| ||||| ||||||||||| ||||||||||| |||||||| |
Sbjct 14764378 AACCACGTTTCTTCAGCCAAAATATGGAAGCAAATGAACCAGAAAAGAAGATACCTTCAA 14764319
Query 19091 CTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCA 19150
| ||||||||||||| | || ||||||| || |||||| |||| | |||||| | |
Sbjct 14764318 CAGCTGCAAAAGCAATAACTCGTTCTCCAAAAGTAGCATTCTTATCAGCGATCCATCTTA 14764259
Query 19151 GTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACA 19210
||||||||||| || ||| | | | |||| | |||| || |||||| || | ||
Sbjct 14764258 AAGCCCAATCAGCTTTTTTTCTGATAAATGGAAACTCATCTAAAGCATTAAAAAGTTTCA 14764199
Query 19211 TACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACT----GTACATTTCTGAA 19266
| | || || || | | || ||| | | || |||| | ||||| ||
Sbjct 14764198 TTCTTTCGTC---AT-TGTCACGTATATAGGTTTCGATAAGTTTTGAATACATCTCACTG 14764143
Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326
||||||||||| || || || || || || || || | | ||| || | || || |||
Sbjct 14764142 TGAATATTTTCCATGGCAATTTGGAAACCATAGAAGAAACGTGCCTCGGGAATTTGAACT 14764083
Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386
|| || ||||||| ||||||||||| |||||||| || |||||| ||| ||||| ||
Sbjct 14764082 TCTTTAGAAAATCTCTCGACCAAATTCTCATTAACAATACCATCAGAAGCGGCAAAGAAA 14764023
Query 19387 GCTAATACATGTTTAATAAAA 19407
||||| ||| || |||||||
Sbjct 14764022 GCTAAGACACGTGAAATAAAA 14764002
>seq1
Length=11693564
Score = 747 bits (828), Expect = 0.0
Identities = 1461/2159 (68%), Gaps = 64/2159 (3%)
Strand=Plus/Plus
Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032
||| || ||| |||| |||| | || | || | |||||||| ||| |||||||| ||
Sbjct 6013143 TTTATCAACACTAAATTTAACAGCATCAGCAGCAGGTTTTGTTCTTAAGTAATACATTCC 6013202
Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092
||| ||||| || |||| | || |||||||| | | | | | ||| ||
Sbjct 6013203 AGTTTTTAATCCACGTTTCCAACTATGAAAATGCATTGAACTACAAATGGCATATGATGG 6013262
Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152
|| | || ||||| |||||| ||||| ||||| ||||| ||||| | |||||| ||
Sbjct 6013263 TTTAGCAACATGAAGATTAAGCGATTGTGATTGATCTATAAAAGCACCACGATCAGCAGC 6013322
Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212
||| || | ||| | |||| | ||| ||||| || |||||||||| || |||||| |
Sbjct 6013323 CATCTCAATTATATCTTTTTGAGATATTTCCCAAACAGTTTTATAAAGTTCTTTAATATT 6013382
Query 47213 TTCTGGGAGAT---TAGTATTTTGAATAGATCCTCCgttttctataattttgttttttaa 47269
||| | | || ||||||| |||||||| || |||| || | || ||||
Sbjct 6013383 AGGTGGAATTTCTTTAATATTTTGGATAGATCCATTATTAGCTATTATCTCATTCATTAA 6013442
Query 47270 ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329
|| | ||| | || | ||| |||| ||| | |||||||||||| ||||||||
Sbjct 6013443 CTCTTCACTCCATATGTTAAGATCAATTAAATCTTTAAGAAGATGAGGATTGACAATTTG 6013502
Query 47330 AAATTCTCCAGATAGTACTCTACGGCTA---TATATATTACTTGTATATGGTTCTATAGA 47386
|| ||||| || || || ||| ||| || || ||| ||||||||||| |||||
Sbjct 6013503 GAAATCTCCTGAAAGAAC---ACGTCTAGTGTAAATGTTAGAAGTATATGGTTCAATAGA 6013559
Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446
|||||||||||| | ||| || |||||||| || || ||||| | |||| ||||||
Sbjct 6013560 TTCATTATTTCCTAGAATCTGTGCAGTTGAAGCAGTTGGCATTGGAGCAAGTAATAAAGA 6013619
Query 47447 ATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGA 47506
||||||||| |||| |||| || | || ||||||||| | |||
Sbjct 6013620 ATTTCTTACACCATGTTTTGCAATGTCTGCTTTTAAAGTTTCCCAATCCCATAAATCACT 6013679
Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566
||| |||||||| | |||||||||||||| ||||| || ||||| |||| |||
Sbjct 6013680 TGGTTTGACATTCCACATGTCATATTGAAGAATACCTTTTGATACTGGAGATCCATCATA 6013739
Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626
||| | ||||||||| | ||| ||| | |||||| ||||||||||| | || ||
Sbjct 6013740 TGTCTCATAAGGACCATCACGTTCAGCTACTTCACATGAAGCTTCCAATGCTCCATGGTA 6013799
Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTT-GCTTCTGATGATTCAAAAGGATANN 47685
||||||||||| || | || || ||| || || | | ||| ||||||||
Sbjct 6013800 AATTGTTTCAAAAATCAACTTATTAAG-TTCTTTAGCGGCAGGTGAAGTGAAAGGATAAC 6013858
Query 47686 NNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTT 47745
|||| ||| || || || |||||||||||||||||||| | || |
Sbjct 6013859 GCATAAGCATAAATGCATCAGCTAAACCCTGAACACCAATACCAATTGGACGGTGTCTCA 6013918
Query 47746 TATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGAN 47805
|||| || ||||| || | ||||| | || | ||| ||||||||||| | |
Sbjct 6013919 TATTTGATTTTCTGGCTTCAGGGACAGGATAATAATTGACATCAATAATTTTATTCAAAT 6013978
Query 47806 NNNNNNNNNNNNNNNNN---ACAATTTCTCTTAATTT---ATTAAAATCAAACTTGTTAT 47859
|||| | | ||| ||||||| || || ||
Sbjct 6013979 TTTTAGTTAGAATTTTAGAAACAACATGAAGTTGTTTGAAATTAAAAGCAGGTTTACCAT 6014038
Query 47860 TTATAAC------AAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT 47913
|| ||| ||| |||||||| || |||||| |||||||||||||||| || ||||
Sbjct 6014039 CTACAACTTCAACAAATCTATTAAGAGCAATAGATCCTAGATTACATACAGCAACTTCAT 6014098
Query 47914 TTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAAT 47973
||| | ||||| | ||||||| ||||| ||| |||||| || || || | ||
Sbjct 6014099 CTGGTGCACAATATTCAACAATTTCAGTACATAAATTTGAACATTTAATGGTTCCAAGAT 6014158
Query 47974 TTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTT 48033
|||| |||||| | ||||| || ||||||| |||| |||||||||| ||||
Sbjct 6014159 TTTGTTGATTACTTTTACGATTACAATGATCTTTGTAAACCATATAAGGTGTTCCGGTTT 6014218
Query 48034 CTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCT--AGC 48091
| || ||| |||| || || ||||| | || |||||||| ||| | |
Sbjct 6014219 CAATTTGACTTTCACAAATCTTTTGCCAAATAACTCTGGCCTTTATTTGTTTTCTGTAAC 6014278
Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATC 48151
|| | |||| ||| || || |||||| | |||||| | || || | || ||
Sbjct 6014279 GTT--TCTCATTTTCATACTTGTGATATAATTCCTCAAAAGCCTCACCCCAAGTATCCTC 6014336
Query 48152 TAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGT 48211
| ||||||||||| | || |||||||| ||||||| || || | ||| | |
Sbjct 6014337 AAGTCCAGGACATTCGTGGGGGCACATCAAAGACCAATAAGAGTCTTTCTCTACACGTTT 6014396
Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATT 48271
|||||||| ||| || ||||||||| | ||||||||| | || |||| |||||||
Sbjct 6014397 CATAAATAAATCAGGAATCCAAAGACCATAAAATAAATCACGAGCTCTTTCTTCTTCAGG 6014456
Query 48272 GCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331
||| |||| | ||||| || | ||| || | || ||||||||||||||||||| |||
Sbjct 6014457 GCCTGTATTTTTCTTAAGATCCAAAAATTCTAAAATGTCAGCATGCCATGGTTCTAGATA 6014516
Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391
||| || | | | || |||| |||||| || ||||| || | ||| | || ||||||||
Sbjct 6014517 TATAGCAAATGCTCCAGGTCTTTTATTTCCCCCTTGGTCAACATAGCGTGCTGTATTGTT 6014576
Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451
| ||||||| |||||||| | | ||||| ||| ||||||| || || |||| ||
Sbjct 6014577 AAAAACTCTCAACATTGGTATTAATCCATTAGATGTACCATTTGTACCACCAATAAAAGA 6014636
Query 48452 TCCACTAGCTCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTA 48510
||| |||| | ||| | || | ||| || ||||| || || ||| || ||||
Sbjct 6014637 ACCATTAGCACGAATACAATGAACATTCAAT-CCAATACCGCCAGCAGATTTTGAAATTA 6014695
Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570
||||| ||||||| |||||||| || ||||| || |||||| ||| ||| ||
Sbjct 6014696 ATGCACATTGTTTAAGAGTATCATATATACCTTCAATTGAATCATCAGACATTGTTAGTA 6014755
Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630
||||| ||||| || ||| | | ||||||| |||||||||||||||||| ||||
Sbjct 6014756 AGAAACACGAAGACAGCTGTGGACGTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCAT 6014815
Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT 48690
|| ||||||| |||| || | | | |||||||||||||||||||| |||||
Sbjct 6014816 GAGTAAACCACTTCTGAGACATATAGTCATATGTTTCAATAACAGAATTAATATCATCCC 6014875
Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTAT 48750
||| || || | | ||||||||||| | || ||| ||||||||| ||| ||| ||
Sbjct 6014876 CATGAATTCCAACTGCCACACGCATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCAT 6014935
Query 48751 TTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGT 48810
||||||| || |||||||| ||| | ||| ||||| |||||||| | | ||| |
Sbjct 6014936 TTATTTTTAATAGATATGAACGTTCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAAT 6014995
Query 48811 CGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTTAT--ATACT------AC 48862
| | | || || || | ||||| | | | || |||||| | || | |
Sbjct 6014996 CTCTGTTATAAACGATAGCAGAATTAAGTTTATCAGCATGTTTTTTGATGATGTTGTGAG 6015055
Query 48863 ATCCATTACAT-TTTTTGATATAATTGATTCCTTGTAAAGA--------TCTTCTACAA- 48912
| | | || | | ||| | ||| | |||| || ||| || || ||
Sbjct 6015056 TTTCCTCACTTATCATTGGCA-AATGTACTCCTGTTACAGAATGACGATAGTTATATAAG 6015114
Query 48913 -----CATCACT-----AAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATT 48962
||| || ||| |||| ||||||| |||||| | |||||| | || |||
Sbjct 6015115 TCACTCATAGCTTCTGAAAAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATT 6015174
Query 48963 CTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACT---AGATATTTCT 49019
|| ||||||| |||||||||||||||||||||||| || || |||| ||| | |||
Sbjct 6015175 CTTGCAGCTAGTATAGCATAATCTGGATGAATTGTCGT-CA--TACTTGCAGAAACTTCA 6015231
Query 49020 GCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTT 49078
|| ||||| |||||||||| || | |||||| |||| | |||||| ||||||||
Sbjct 6015232 GCAGCTAAATTATCTAATTCAACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107851441400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |