Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 1e-11
>seq2
Length=16759152
Score = 86.0 bits (94), Expect = 1e-11
Identities = 111/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Plus
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| || || |||||||| || ||||||||||| || || |||||| || |||||||||
Sbjct 14764015 GTCTTAGCTTTCTTTGCCGCTTCTGATGGTATTGTTAATGAGAATTTGGTCGAGAGATTT 14764074
Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGA 25715
| | ||||| || |||| || || | ||||| |||||||| || ||||| ||
Sbjct 14764075 TCTAAAGAAGTTCAAATTCCCGAGG-CACGTTTCTTCTATGGTTTCCAAATTGCCATGGA 14764133
Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTT 25746
|||| | ||| |||| ||||| | || |||
Sbjct 14764134 AAATATTCACAGTGAGATGTATTCAAAACTT 14764164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843232574400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |