Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 1e-11 >seq2 Length=16759152 Score = 86.0 bits (94), Expect = 1e-11 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || || || |||||||| || ||||||||||| || || |||||| || ||||||||| Sbjct 14764015 GTCTTAGCTTTCTTTGCCGCTTCTGATGGTATTGTTAATGAGAATTTGGTCGAGAGATTT 14764074 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||||| || |||| || || | ||||| |||||||| || ||||| || Sbjct 14764075 TCTAAAGAAGTTCAAATTCCCGAGG-CACGTTTCTTCTATGGTTTCCAAATTGCCATGGA 14764133 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTT 25746 |||| | ||| |||| ||||| | || ||| Sbjct 14764134 AAATATTCACAGTGAGATGTATTCAAAACTT 14764164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843232574400