Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 201 3e-46 seq1 196 1e-44 seq14 102 2e-16 >seq2 Length=16759152 Score = 201 bits (222), Expect = 3e-46 Identities = 700/1072 (65%), Gaps = 44/1072 (4%) Strand=Plus/Minus Query 155327 ATAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTCAGATGTAAATGCGAT 155386 |||||| || ||||| || | | |||| | |||||| || ||||| || | ||| Sbjct 8585851 ATAAATAGTTTCAAAAATTTTTATATTAAGATCTTTAGCTTCTGGTGATGTGAAAG-GAT 8585793 Query 155387 ATC-CATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCC 155445 | | ||| |||||||| || || | || ||||| ||||| || | ||| |||||| Sbjct 8585792 ACCTCATAAGCAAAAATGTATCAGCAAGTCCTTGAACACCAATTCCAATTGGACGATGCT 8585733 Query 155446 TGTAATT-GCT---CCTGCTTGTCTTCTTGTTTGGGTAAAAATTCACATCAATAATGTTA 155501 | ||| | | | |||| ||||| || || |||||||| | ||||||||| ||| Sbjct 8585732 TAAGATTTGATAAACGAGCTT--CTTCTAGT--GGATAAAAATTAATATCAATAATTTTA 8585677 Query 155502 TTTAAATTT---GTAACCAATACCTTGGTTACGTCTGCTA--ATTTCACATAGTCAAATG 155556 ||||||||| || || | | || || || || | |||| | | |||||||| Sbjct 8585676 TTTAAATTTCTTGTTACAATT---TTTGTCACATCATGAAGCATTTTAAA--GTCAAATG 8585622 Query 155557 T---TTTATCCTCATTTA------CAAACATACCAAGACCAATAGACGCCAGATTACATA 155607 | ||| | || |||| |||||||| ||| |||| || || | |||||| | Sbjct 8585621 TAGGTTTTTTTTCTTTTATAACAACAAACATATTAAGTGCAATTGATGCTAAATTACAAA 8585562 Query 155608 CCGCAGTCTC-CTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTG 155666 | ||| || |||| | | |||| | ||| ||| || || || |||| | Sbjct 8585561 CAGCAACTTCGCTTGGAGAA-CAATATTGAATAATTTCAGTACATAGATTTGAACATCTA 8585503 Query 155667 ATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTAT 155726 || || |||||||| | || ||| ||||| |||||| ||| || || | || ||| Sbjct 8585502 ATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACAATGATCTTTATAAACCATATAT 8585443 Query 155727 GGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATT 155786 || | || || || ||||| | || ||| || |||| | | || || ||| Sbjct 8585442 GGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTGCCAAACAAATCTAGCTTTTATT 8585383 Query 155787 TGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAA--TCCTCAC 155844 ||||| | | || ||| |||||||| ||||| || ||| || | |||| Sbjct 8585382 TGCTTTCGGAACCTTTTTTCATTTTCATATTTAATATAAAG--TTCATCAAATTTATCAC 8585325 Query 155845 CGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTAC 155904 | |||||| | || || || || | || || || | | |||||| || | Sbjct 8585324 CAAAACAATTATCAAGACCTGGACATTCATAAGGACACATTAATGACCAATGAAGAT--C 8585267 Query 155905 CGATT--ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC 155962 | || ||||| | |||||||| ||| |||||| |||| || | || | || Sbjct 8585266 CTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTCCATAAAATAAATCACGAGC 8585207 Query 155963 CTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGAT 156021 ||| || || || ||| || ||| || ||||| |||||| ||||||| || Sbjct 8585206 TCTTGCTTCTTCTGGACCTGTGTTTTTTCT-TAAATCTAAAAATTCCATTATATCAGCAT 8585148 Query 156022 GGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACAT 156078 | ||| |||| || || ||||| ||| | | || ||||||||||| |||| Sbjct 8585147 GCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTATTACCACCCTGATCAACAT 8585088 Query 156079 ACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGG 156138 | |||||||| |||| | |||| || ||| || || | |||||| || | ||||| | Sbjct 8585087 AACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAACCATTTGATGATCCATTTG 8585028 Query 156139 TTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTG 156198 |||| |||| | ||||| | |||| | ||| || |||||| || || | Sbjct 8585027 TTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATACTTAATCCAATTCCTCCGG 8584968 Query 156199 ACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCAT 156258 |||| |||||| ||| |||| || | ||| | |||| |||||||||||||||| Sbjct 8584967 CAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAATTCCTTCAATAGAATCAT 8584908 Query 156259 CTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATA 156318 | |||||| || || | | || || |||||| | || | ||||| || || |||| Sbjct 8584907 CAGCCATTGTTAATAAAAAACATGACGATAATTGTGCACGAGAAGTTCCTGCATTAAATA 8584848 Query 156319 GTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC 156370 ||| || | ||||||||||| | || ||||||||||| |||||||| Sbjct 8584847 ATGTTGGGGAAGCATGAATAAACCATTTTTTAGACATATATAAATATGTCTC 8584796 Score = 149 bits (164), Expect = 2e-30 Identities = 251/356 (71%), Gaps = 7/356 (2%) Strand=Plus/Minus Query 289018 CTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGT 289077 || |||||| | ||||||||||| ||||| ||||| || | | ||| || ||||||| | Sbjct 9293148 CTTCTTTTTCTTCCAACAGCATCTATTTCATCAATAAACAAGATACATGGTGAATTTTTT 9293089 Query 289078 CTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACA 289137 || || || ||||| | || | ||| | | | |||| ||||||| ||||||| | | Sbjct 9293088 CTAGCCATAGCAAACATATCACGTACTCTAGCAGGACCAACACCAACAAACATTTCAAGA 9293029 Query 289138 AATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCC 289197 || || || | |||||| || |||| |||||| ||||| || || || | || Sbjct 9293028 AACTCTGATCCAGATACTGTTATAAATGGTACATTAGCTTCACCAGCAGTGGCTTTAGCA 9292969 Query 289198 AGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA-TAGAACTCCCTTTGGTACTTTTGC 289256 || | ||| |||||||| || |||||| ||| ||| ||| |||| || || | ||| || Sbjct 9292968 AGTAATGTTTTACCTGTACCTGGTGGT-CCTGTAAGAAGAGCTCCTTTAGGAATTTTAGC 9292910 Query 289257 CCCAGCAGACTTATATTTCTCAGGGCTCTTTAA--AAATTCTACAATTTCCTCAAGTTCA 289314 ||| | ||||||| | | || | ||||| ||||| ||||| |||| || ||| Sbjct 9292909 ACCAAGATTTTTATATTGGTTA-GGATTTTTAAGGAAATT-TACAAATTCCATAATTTCT 9292852 Query 289315 TATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTTCTT 289370 |||||| || || || || || ||||| ||| | | |||||||| ||||| Sbjct 9292851 ACTTTTGCTTCTTCGCAGCCAGCAACATCTTTAAATGATACTTTAATATC-TTCTT 9292797 Score = 107 bits (118), Expect = 6e-18 Identities = 206/299 (69%), Gaps = 5/299 (2%) Strand=Plus/Minus Query 381194 CTGCGTGGAATCCTTGCCAGATTAATGATATGGCTTTACCACCTTGCCATATTTTATGCC 381253 |||| |||||||| | | || || | |||| ||| || || || |||| |||| | Sbjct 13736077 CTGCATGGAATCCATCTGATCTTGATAAAATGGTTTTGCCTCCATGTCATACTTTAGCTC 13736018 Query 381254 AGTTCAATGTTTCGGCTGGTAATAAGTTAAGTTGTGCTTTATATCAGCGTAGCGGTGATG 381313 | || ||||| | ||| | || |||||||| ||| ||||| ||||| || |||| Sbjct 13736017 AATTTTATGTTCAAGATGG--AGAA-TTAAGTTGCCATTTGTATCAACGTAGTGGGGATG 13735961 Query 381314 TTGGTCTGGGTGTTCCATTCAATATTGCTTCGTATTCTATGCTTACTCGTTTAATTGCTC 381373 ||||||| ||||||||||| || |||||||| || ||| | | |||| | | ||||| Sbjct 13735960 TTGGTCTTGGTGTTCCATTTAACATTGCTTCATACTCTCTTTTAACTCATATGATTGCAA 13735901 Query 381374 ATCACACTGGACTAATTGCGGGTGATTTTGTTTATTATCTCGGTAATACTCATATATACG 381433 | |||| || | | ||||| |||||| | | | || || ||||||||||| Sbjct 13735900 AAGTTTGTGGAATAGCTACAGGTGAATTTGTTCACACTATTGGAGATGCTCATATATACA 13735841 Query 381434 ACGACCATATTGA-GAATTTAAAAGTTCAAAAAACCAGGACACCATATGCGTTTCCAAC 381491 | | || ||||| | | || ||| ||||| ||| | ||| ||| |||||||| Sbjct 13735840 AAAATCACATTGATGCACTT-AAACTTCAATTAACTCGTGAACCTTATCAATTTCCAAC 13735783 Score = 104 bits (114), Expect = 7e-17 Identities = 254/376 (68%), Gaps = 13/376 (3%) Strand=Plus/Minus Query 106901 TTTTTCATAGCAAAAGACGAACTCATACCATAGAAAAACTTGAACTTTTTACCATC---T 106957 |||||||| || | ||| ||||||||| || | || | ||||| |||| | Sbjct 10831686 TTTTTCATTGCTGTATCAGAAGACATACCATAAAACATTTTATATTTTTTTCCATTCTTT 10831627 Query 106958 TCCTCAAT-TAACTTACCTGGATTTTCATCGTGTCCCGCAAAGACACCGCCAACCATTAC 107016 || |||| | || ||||| || ||| || || ||||| | || |||| ||| || Sbjct 10831626 TCAACAATATCACC-ACCTGA---TTGATCATGACCAGCAAAAAGTCCACCAATCATAAC 10831571 Query 107017 GAAATCAGCCCCGCCACCGAATGCTTTAGCCATATCACCAGGGCAAGTAATTCCACCATC 107076 |||||||| || |||| ||||||||||| | ||||||||| |||| |||||||| Sbjct 10831570 AAAATCAGCACCAGCACCAAATGCTTTAGCAACATCACCAGGATTAGTACAACCACCATC 10831511 Query 107077 ACTAATAATATAAGTTTTA--TCGATGCG-AG-ATTCGCACGCCTCTAATACACAAGAGA 107132 | |||| || | ||| | ||| | || || |||| || | ||| ||| | Sbjct 10831510 AGACATAACATGACCATTAAGACCATGTGCAGCATCAGCAC-ATTCAAGAACAGCAGATA 10831452 Query 107133 GTTGGGGCATACCAATACCTGTTTGAATTCTTGTAGTGCAAGCACTTCCACCACCGATAC 107192 ||| || ||||| ||| || | ||||||| || ||| || ||| ||| |||| Sbjct 10831451 ATTGAGGATAACCAACACCAGTCTTCTTTCTTGTTGTACAAACAGATCCTGGACCAATAC 10831392 Query 107193 CAACTTTAACAATATCCATACCACAATCAATTAAATCTTGAACTCCCTCTTTAGTAGCGA 107252 | |||||||||| ||| |||| |||||| |||| ||| ||| |||| | | Sbjct 10831391 CTACTTTAACAACATCAGCACCAGTTAAAATTAATTCTTCAACCATTTCTCCAGTAACAA 10831332 Query 107253 CATTACCAGCAATAAT 107268 ||||||| || ||||| Sbjct 10831331 CATTACCTGCCATAAT 10831316 Score = 89.7 bits (98), Expect = 2e-12 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| | ||||||||| ||||| ||||| | ||| || | ||| | | ||| | Sbjct 7580568 ACCAATGGAATCAATTTCATCAATAAAAATAATACAAGGTGCATTAGCTTTAGCATTCTT 7580627 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| |||| || | ||| || |||||| | ||||| |||| ||||| | Sbjct 7580628 AAATAAAGCTCTCACTCTTTTTGCACCTTCACCAACTAAAATTTCATCAAACTCAGATCC 7580687 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 ||| | | |||| ||||||||| || || || ||||| | || | | || || Sbjct 7580688 TGATGTATAGAAAAATGGTACATTTGCCTCACCAGCAACTGCACGAGCTAATAACGTTTT 7580747 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 || || ||||||||||| | | || ||| || ||||||| |||||| ||| Sbjct 7580748 TCCAGTACCAGGTGGTCCAACAAGTATAACACCTTTTGGTAGTTTTGCACCA 7580799 Score = 84.2 bits (92), Expect = 6e-11 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 252530 TATCCATCCTATTATCATAATTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCAC 252589 ||||||| | | || | |||| || |||||| ||| | ||||| || |||||||||| Sbjct 8581466 TATCCATTCGAACATGAAAATTAGTTGCATACACACCCATAGCCTGTTTACCCATAGCAC 8581407 Query 252590 TCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACA- 252648 | || || || |||||||| || ||||||| || ||||| ||||| || || ||| Sbjct 8581406 TTTGATATGTGTTTCTGGGTGATTGATTGTGATCAGGGAATGGAATAATAGAAGC-ACAT 8581348 Query 252649 ACACCGAAGATAGTGCTTGGGTGAATTTCACAGTGACTGTAAT 252691 || |||| || || ||| || | |||||| || |||||| Sbjct 8581347 ACTCCGAGAATCATGGCTGGATGGACTTCACAATGTGTGTAAT 8581305 >seq1 Length=11693564 Score = 196 bits (216), Expect = 1e-44 Identities = 696/1066 (65%), Gaps = 34/1066 (3%) Strand=Plus/Plus Query 155328 TAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTCAGATGTAAATGCGATA 155387 |||||||| ||||| || | ||||| | | |||||| | || || || | |||| Sbjct 6013798 TAAATTGTTTCAAAAATCAACTTATTAAGTTCTTTAGCGGCAGGTGAAGTGAAAG-GATA 6013856 Query 155388 TC-CATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCT 155446 | ||| | ||||| || |||||||||||||| |||||||| | ||| || || || Sbjct 6013857 ACGCATAAGCATAAATGCATCAGCTAAACCCTGAACACCAATACCAATTGGACGGTGTCT 6013916 Query 155447 G-TAATTGCTCCTGCTTGTCTTCTTGTTTGGG-TAAAAATTCACATCAATAATGTTATTT 155504 || ||| | | || |||| | || ||| |||| ||||||||||| ||||| Sbjct 6013917 CATATTTGATTTTC--TGGCTTCAGGGACAGGATAATAATTGACATCAATAATTTTATTC 6013974 Query 155505 AAATTTGTAACCAATACCTTGGTTACGTC-TGC--TAATTTCACATAGTCAAAT--GTTT 155559 |||||| || | | || | || | || | ||| | || | ||| | || Sbjct 6013975 AAATTTTTAGTTAGAATTTTAGAAACAACATGAAGTTGTTTGAAAT--TAAAAGCAGGTT 6014032 Query 155560 TATCCTC----ATTT--ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAG 155613 || | || | || ||||| || |||| ||||||| | ||||||||||| ||| Sbjct 6014033 TACCATCTACAACTTCAACAAATCTATTAAGAGCAATAGATCCTAGATTACATACAGCAA 6014092 Query 155614 TCTCCTTGTCGT-CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTG 155672 || | | | || | | ||||| ||||| ||| || | || |||| || ||||| Sbjct 6014093 -CTTCATCTGGTGCACAATATTCAACAATTTCAGTACATAAATTTGAACATTTAATGGTT 6014151 Query 155673 CCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTT 155732 || | ||| | || ||| ||||| |||||| ||| ||||| | || || || ||| Sbjct 6014152 CCAAGATTTTGTTGATTACTTTTACGATTACAATGATCTTTGTAAACCATATAAGGTGTT 6014211 Query 155733 CCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTG 155792 || || || || || || ||||||| |||| | | | ||| || ||||| || Sbjct 6014212 CCGGTTTCAATTTGACTTTCACAAATCTTTTGCCAAATAACTCTGGCCTTTATTTGTTTT 6014271 Query 155793 TTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAAT--CCTCACCGTAAC 155850 |||| | || ||||| || ||| | ||| || ||||||| || Sbjct 6014272 CTGTAACGTTTCTCATTTTCATACTTGTGATATAA--TTCCTCAAAAGCCTCACCCCAAG 6014329 Query 155851 AATCACTCA-GTCCAGGGCACTTATCGGGGCAAAACAGCGACCAA--ATTTTATTACCGA 155907 ||| |||| ||||||| || | | |||||| | || |||||| | | || | Sbjct 6014330 TATC-CTCAAGTCCAGGACATTCGTGGGGGCACATCAAAGACCAATAAGAGTCTTTCTC- 6014387 Query 155908 TTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTG 155967 |||||| | |||||||| |||| ||||| | |||| || | || | || || Sbjct 6014388 -TACACGTTTCATAAATAAATCAGGAATCCAAAGACCATAAAATAAATCACGAGCTCTTT 6014446 Query 155968 ACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027 || ||| ||| ||| ||| || || || ||||| ||| |||| ||| || Sbjct 6014447 CTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAAATTCTAAAATGTCAGCATGCCATG 6014506 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAG 156084 | || ||||| |||||||| ||| || || || || || || ||||| || | Sbjct 6014507 GTTCTAGATATATAGCAAATGCTCCAGGTCTTTTATTTCCCCCTTGGTCAACATAGCGTG 6014566 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144 | || || || || || | | ||| || || | ||||| || || ||||| || || | Sbjct 6014567 CTGTATTGTTAAAAACTCTCAACATTGGTATTAATCCATTAGATGTACCATTTGTACCAC 6014626 Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204 |||| |||||| | |||| | ||||| || | ||||||||| || | ||| Sbjct 6014627 CAATAAAAGAACCATTAGCACGAATACAATGAACATTCAATCCAATACCGCCAGCAGATT 6014686 Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264 | |||||| || |||| || | ||||| | ||||||||||| |||||||| || Sbjct 6014687 TTGAAATTAATGCACATTGTTTAAGAGTATCATATATACCTTCAATTGAATCATCAGACA 6014746 Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324 ||| ||||| | |||||| | || || ||| ||||| || || |||| ||| | Sbjct 6014747 TTGTTAGTAAGAAACACGAAGACAGCTGTGGACGTCTGGTTCCTGCATTAAATAATGTTG 6014806 Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC 156370 | | |||||| |||| |||| | ||||||||| || ||||| || Sbjct 6014807 GAGAGGCATGAGTAAACCACTTCTGAGACATATAGTCATATGTTTC 6014852 >seq14 Length=507912 Score = 102 bits (112), Expect = 2e-16 Identities = 210/307 (68%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||||| || ||||||| || ||| | ||||||| || || || | ||| Sbjct 420987 TTTCTTACAGTTCCATCATAATTAACCATTACACTTTCCATAGCTTTTATCAATCTACGT 421046 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||| ||||| ||| || ||||| ||||| |||||||| ||||| | | ||| ||| Sbjct 421047 TGAATGTAACCCGTTTCAGCGGTTTTGACAGCAGTATCAATAAGACCTTCTCTACCTCCC 421106 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 |||||||||||||| | || | ||| || || ||| | | || | || || ||| Sbjct 421107 ATAGCATGGAAGAAAAATTCAGCAGGTGTTAAACCAGCAAGATATGAATTTTCTACAAAA 421166 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTA-AAGTGTGGCAGGGTCCTGT-TCTCAT 302776 || | || || || || | ||| | | || ||||| | | | | ||| | Sbjct 421167 CCTTTAGATTCTGGTCCATAATC-ATCTTTGAAGAAATGTGGTAAACTACGATGTCT-AA 421224 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 | || |||| ||||| || || ||||||||||||||||| | || | ||| | ||| | Sbjct 421225 AACCAAATGGAATACGTTTACCTTCAACGTTCTGCTGTCCTACACAAGCAATAACCTGTG 421284 Query 302837 AAATATT 302843 ||||||| Sbjct 421285 AAATATT 421291 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 304029 TAAGTTGGGGTCAGGTGTAATTACAGAGCGAGCACTAAAATCAACACGCTTACCCATAAG 304088 ||| || || || |||||||| || | |||||| |||||||||||| |||||||| | Sbjct 422510 TAAATTTGGATCTGGTGTAATAACTGTACGAGCAGAAAAATCAACACGTTTACCCATCAA 422569 Query 304089 ATTACCCCTAACACGACCGCCCTTACCGTTTAGCCTATCCTTGATTGCCTTCAGGGGGCG 304148 ||| || | || |||||| | ||||| || | ||| | ||||| | ||| | || || Sbjct 422570 ATTTCCACGAATACGACCTTCTTTACCTTTCAACCTTTGTTTGATAGACTTTAATGGACG 422629 Query 304149 ACCCGAACGCTGGGCTACAGCCGCAACGCCAGGAATCTTATTGTCTACCAGCGTCGCAAC 304208 || || || | |||| |||| |||||||| || || || | || ||||| Sbjct 422630 CCCAGATTTTTGTGTAGCAGCAGCAATACCAGGAATAGAGTTATCAACAAAAGTAGCAAC 422689 Query 304209 ATAATATTGCAG 304220 || |||||| || Sbjct 422690 ATGATATTGAAG 422701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815054215495