Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 315 2e-80 seq1 300 4e-76 seq14 134 3e-26 seq13 122 2e-22 >seq2 Length=16759152 Score = 315 bits (348), Expect = 2e-80 Identities = 584/844 (69%), Gaps = 15/844 (2%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||| || | ||| || ||||| | |||||| | | |||||| | || | Sbjct 8584667 TATTTTGGATTTAGAACACTAGAACGATCATATTTATTAAGAATCAATGATAAAATTGTG 8584726 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | |||||| | ||||| | || || || || | |||||| || | |||||| Sbjct 8584727 GAAAGACCTCAATATATGTTAATGCGAGTAGCTATAGCAATTCATAGAGAAGATATTGCT 8584786 Query 110424 GCTGTTATTGAATGTTATGATGTAT-TAAGTAAAAAGAAAGCT--ATTCATGCTACTCCT 110480 ||| |||||| | || || ||| || || ||| || | | ||||||||| | || Sbjct 8584787 TCTGCTATTGA--GACAT-ATTTATATATGTCTAAAAAATGGTTTATTCATGCTTCCCCA 8584843 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || ||||||| ||||||||| | | | |||||| | || || ||| | || ||| Sbjct 8584844 ACATTATTTAATGCAGGAACTTCTCGTGCACAATTATCGTCATGTTTTTTATTAACAATG 8584903 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 ||||||||||||||||| |||||||| || | ||| || |||| | ||||| ||| Sbjct 8584904 GCTGATGATTCTATTGAAGGAATTTATGACACTTTGAAACAATGTGCTATAATTTC-AAA 8584962 Query 110601 AACT-CTGGAGGAATTGGTATTCACGTTCA-TGATATTCGCTCAAAAGGAGCAAATATCG 110658 | || | ||||||||||| ||| | || || ||||| | ||| || ||| | Sbjct 8584963 ATCTGCCGGAGGAATTGG-ATTAAGTATCTCTGGAATTCGTGCTTCTGGAACATTTATTG 8585021 Query 110659 CAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTG 110718 || | | || || | |||| ||| | | ||||||||| | || | || |||| Sbjct 8585022 CAGGAACAAATGGATCATCAAATGGTTTAATACCAATGTTACGTGTTTATAATAGTACTG 8585081 Query 110719 CAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAAC 110775 | ||||| |||| |||||||| | || ||| ||||||| ||||| | |||| Sbjct 8585082 CTCGTTATGTTGATCAGGGTGGTAATAAACGACCTGGGGCATTTGCAATCTACTTGGAAC 8585141 Query 110776 CTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835 | |||||| | |||||| | ||||| ||||| | | ||||| ||| |||||| Sbjct 8585142 CATGGCATGCTGATATAATGGAATTTTTAGATTTAAGAAAAAACACAGGTCCAGAAGAAG 8585201 Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895 |||||| |||||||||||||||| | | ||| || |||||||||| |||||||||||| Sbjct 8585202 CAAGAGCTCGTGATTTATTTTATGGACTTTGGGTTCCAGATTTATTTATGAAACGTGTTG 8585261 Query 110896 AAGAAAAT-GGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTA 110954 || | || ||| ||||| | ||||||||| || | ||| ||||| | || Sbjct 8585262 AACAGGATCTTCAT-TGGTCATTAATGTGTCCTTATGAATGTCCAGGTCTTGATAATTGT 8585320 Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014 | ||| | | ||||| || ||||| ||||||||||| ||| | ||| || || Sbjct 8585321 TTTGGTGATAAATTTGATGAACTTTATATTAAATATGAAAATGAAAAAAGGTTCCGAAAG 8585380 Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 ||||| |||| | ||||| ||||| |||||| || |||||||||| | | Sbjct 8585381 CAAATAAAAGCTAGATTTGTTTGGCAGAAAATTTGTGAATCTCAGATTGAAACTGGTATT 8585440 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || ||||| | |||||||||||| |||||| ||| ||||||| ||||||||||| Sbjct 8585441 CCATATATGGTTTATAAAGATCATTGTAATCGTAAAAGTAATCAACAAAATTTAGGAACG 8585500 Query 111135 ATTA 111138 |||| Sbjct 8585501 ATTA 8585504 Score = 145 bits (160), Expect = 2e-29 Identities = 373/562 (66%), Gaps = 7/562 (1%) Strand=Plus/Plus Query 131578 TCTT-GCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCA 131636 |||| || ||||| |||| |||||| ||||||| ||| ||| | || | || Sbjct 14764016 TCTTAGCTTTCTTTGCCGCTTCTGATGGTATTGTTAATGAGAATTTGGTCGAGAGATTTT 14764075 Query 131637 TTCAAGAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAAT 131696 | ||||| || | ||||| || | | | ||||| || ||| || | ||| Sbjct 14764076 CTAAAGAAGTTCAAATTCCCGAGGCACGTTTCTTCTATGGTTTCCAAATTGCCATGGAAA 14764135 Query 131697 CTATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATA 131756 |||||| || |||||||||||| | | || || | || || | ||| |||| Sbjct 14764136 ATATTCACAGTGAGATGTATTCAAAACTTATCGAAAC-CTA--TATACGTGACAATGACG 14764192 Query 131757 AAA--AT-AAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAAT 131813 ||| || ||| | ||| ||||| || || | ||||| || | ||| ||||| || | Sbjct 14764193 AAAGAATGAAACTTTTTAATGCTTTAGATGAGTTTCCATTTATCAGAAAAAAAGCTGATT 14764252 Query 131814 GGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTG 131873 ||||| | | |||||| ||| | |||| |||| | || || | ||||||| Sbjct 14764253 GGGCTTTAAGATGGATCGCTGATAAGAATGCTACTTTTGGAGAACGAGTTATTGCTTTTG 14764312 Query 131874 CTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGC 131933 | |||||||||||| |||||||| ||| | || | | || |||||||| ||||| | Sbjct 14764313 CAGCTGTTGAAGGTATCTTCTTTTCTGGTTCATTTGCTTCCATATTTTGGCTGAAGAAAC 14764372 Query 131934 GTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGC 131993 |||| |||||||| ||| | || |||||| |||| || || |||||||| | ||| | Sbjct 14764373 GTGGTTTGATGCCAGGATTGACACATTCCAATGAATTGATTTCAAGAGATGAGGGATTAC 14764432 Query 131994 ATACTGAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATA 132053 | ||| || || | || | ||| | ||| | |||| |||| | || Sbjct 14764433 ACCGTGATTTCGCCTGCCTTATGTTTAGTTACCTTGAAAACAAACCATCTGAAGAACGTA 14764492 Query 132054 TTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGC 132113 | ||| || |||| | | ||||||||||| || ||||| | ||||||| ||| | | Sbjct 14764493 TAAAAGAAATTATTAAAAATGCAGTTGATATTGAAAAGGAATACCTTACAGATGCTCTTC 14764552 Query 132114 CTTGCAATTTGATTGGGATGAA 132135 || || ||||||| ||||| Sbjct 14764553 CTGTTGATATGATTGGAATGAA 14764574 Score = 127 bits (140), Expect = 5e-24 Identities = 331/493 (67%), Gaps = 34/493 (7%) Strand=Plus/Plus Query 58751 GCATCAATATGATTATGGTAAACGTGAGCATCTCCAATAATATGATGAACCAATCCAGGt 58810 |||||||| ||||| | ||| | ||||||||||||||| | ||| || ||| || | Sbjct 13735825 GCATCAATGTGATTTTTGTATATATGAGCATCTCCAATAGTGTGA---ACAAATTCACCT 13735881 Query 58811 tt---ttttCCTGTCT-TTTTACACATTATATGAAGCAATACGGAGTATGAAACCATATT 58866 | | |||| |||| || || |||||| || | ||||||||| | || || Sbjct 13735882 GTAGCTATTCCACAAACTTTTGCA-ATCATATGAGTTAAAAGAGAGTATGAAGCAATGTT 13735940 Query 58867 AAAAGGGATTCCAAGAAACATATCACCACTACGTTGATA-AAATTGTAGATTAAGAGTGT 58925 ||| || | |||||| | ||| |||||||||||||| |||| | | |||| | Sbjct 13735941 AAATGGAACACCAAGACCAACATCCCCACTACGTTGATACAAATGGCAACTTAATTCTC- 13735999 Query 58926 CATCTGCTTCTACATAAAATTGACATAAAATATGACAAGGAGGAAGTGCCATTTTATCAA 58985 ||||| | |||||||||||| |||| ||||||| ||||| | |||||||||||| Sbjct 13736000 CATCT---TGAACATAAAATTGAGCTAAAGTATGACATGGAGGCAAAACCATTTTATCAA 13736056 Query 58986 TATCACTTACATTCCATGCACTGAAAATAATGCGACGAGAATGAG----GGTCATT-TTT 59040 |||| | |||||||||| |||||||| | | ||| || |||| || ||| Sbjct 13736057 GATCAGATGGATTCCATGCAGATAAAATAATTCTTCTTGAAAAAGGATTGGTCTTTATTT 13736116 Query 59041 AATAAGTTCTTCACAATGTTTTATTTGGTCAAATCCATTA-GTATATTCAGTATTGGCAT 59099 || | || || || | ||| |||| ||| | | | ||| || ||| | Sbjct 13736117 GATCAATT----AC-TTGGGCCAATTGATCAATTCCTTCACCTCTAT----AATCGGCGT 13736167 Query 59100 CAA------TGTATTTATCTCCCCAATAACGCCATTGAAAACCATATACAGGTCCAAGAG 59153 ||| ||||| || |||| ||| | ||||||||||||||| |||||||| | | Sbjct 13736168 CAACGCCTTTGTATGTAGCTCCAAAATGTCTCCATTGAAAACCATAAACAGGTCCCAAAT 13736227 Query 59154 TTCCTTCAGGATATTCATTTAAACCACGAGAGTCAAGAAATTCTCTTGTTGAATTACCAT 59213 ||||| | |||| | || ||| || || ||||| ||||| || || | | Sbjct 13736228 CGCCTTCTTGTCTTTCAGTAAATCCAAGATTATCGAGAAACTCTCTACTTCCGTTTGCTT 13736287 Query 59214 CCCAAATATGAAC 59226 ||||||| | ||| Sbjct 13736288 CCCAAATTTTAAC 13736300 Score = 113 bits (124), Expect = 1e-19 Identities = 112/142 (79%), Gaps = 6/142 (4%) Strand=Plus/Plus Query 167779 AAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAA 167838 ||| |||||||| || | |||||||| ||| ||||||||||||||||||||||||||| Sbjct 1050151 AAAGTAATAACATAACT---TCTAATGAATTATCACCTCTATCAACATAATCACCTAAAA 1050207 Query 167839 ATATATATTTATTTTGGTTTGAAGGATTATCTAGTTTTTTAAAAATATTCAATAAATCAC 167898 ||| | |||| ||||| ||| || || | | |||||||||||| | | ||||||| Sbjct 1050208 ATACAAATTT-TTTTG--TTGGTGGTTTTCCAAATTTTTTAAAAATCCTAAGTAAATCAT 1050264 Query 167899 TAAATTGACCATGTAAATCACC 167920 || |||| ||||| | ||| || Sbjct 1050265 TATATTGTCCATGAATATCTCC 1050286 Score = 104 bits (114), Expect = 6e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 279065 GGTATTCCAAAACTTGATGATGCAAACTGGGCTGGAGGTCGTAAATCTCAAGAATGTGCT 279124 ||||||||||||||||| ||||| || |||||| | || ||| ||||| || Sbjct 5555825 GGTATTCCAAAACTTGAAGATGCTAATGAAGCTGGAACTAAAAATTCTTCCAAATGTACT 5555766 Query 279125 TTATTTCTTACTGAGGGAGATTCTGCTGCTACATTTGCGATTGCTGGTTTATCTGTTATT 279184 | ||||||||||||||||||||||| ||| |||| || ||||| | |||| | Sbjct 5555765 CTTATTCTTACTGAGGGAGATTCTGCTAAGACACTTGCAGTTTCTGGTCTTGGTGTTGTA 5555706 Query 279185 GGTCGTGATAAATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTAATGCTCGTGAT 279241 || || ||| | ||||| |||||||| || | |||||| | | |||| |||||| Sbjct 5555705 GGACGAGATTATTATGGAGTATTTCCATTGCGTGGTAAAATGTTAAATGTACGTGAT 5555649 Score = 95.1 bits (104), Expect = 3e-14 Identities = 112/149 (75%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 352851 TTGGAGACAAGTTCGCTTCTCGATCTGCTCAAAAAGGAACAATTGGAATGTTGCTCAGTG 352910 |||||||||| |||||||| || || |||||||| ||||| |||||| || || Sbjct 8582022 TTGGAGACAAATTCGCTTCAAGACATGGACAAAAAGGTACAATGGGAATGATGTATCGTC 8582081 Query 352911 AAAAGGATATGCCTTTCGACAAAA-ATGGCTTAAAACCTGACATTATTATTAATCCAAAT 352969 || | ||||||||||| |||||| | || || || ||||| ||||||||||| || Sbjct 8582082 AAGAAGATATGCCTTT-TACAAAAGAAGGATTGTCTCCAGACATCATTATTAATCCTCAT 8582140 Query 352970 GCGATTCCCTCTAGAATGACAATAGCTCA 352998 || |||| ||| | |||||||| | ||| Sbjct 8582141 GCCGTTCCATCTCGTATGACAATTGGTCA 8582169 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 279065 GGTATTCCAAAACTTGATGATGCAAACTGGGCTGGAGGTCGTAAATCTCAAGAATGTGCT 279124 ||||||||||||||||| ||||| || |||||| | || ||| ||||| || Sbjct 1001717 GGTATTCCAAAACTTGAAGATGCTAATGAAGCTGGAACTAAAAATTCTTCGAAATGTACT 1001658 Query 279125 TTATTTCTTACTGAGGGAGATTCTGCTGCTACATTTGCGATTGCTGGTTTATCTGTTATT 279184 | ||||||||||||||||||| || || |||| || ||||| | |||| | Sbjct 1001657 CTTATTCTTACTGAGGGAGATTCAGCCAAAACGCTTGCAGTTTCTGGTCTTGGTGTTGTA 1001598 Query 279185 GGTCGTGATAAATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTAATGCTCGTGAT 279241 || |||||| ||||| |||||||| || | |||||| | | |||| |||||| Sbjct 1001597 GGACGTGATTTTTATGGAGTATTTCCACTACGTGGTAAAATGTTAAATGTACGTGAT 1001541 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 279117 AATGTGCTTTATTTCTTACTGAGGGAGATTCTGCTGCTACATTTGCGATTGCTGGTTTAT 279176 ||||| ||||||||||||| || || || || || |||| | || ||||||| | Sbjct 1164894 AATGTTCTTTATTTCTTACAGAAGGTGACTCAGCAAAAGCATTGGTTGTTTCTGGTTTTT 1164835 Query 279177 CTGTTATTGGTCGTGATAAATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTAATGCTC 279236 |||| ||||| | ||| ||||| || |||||||||| ||||||| |||||||||| Sbjct 1164834 CTGTCATTGGAAGAGATTTTTATGGTGTTTTTCCTTTAAAAGGTAAAAGTATTAATGCTC 1164775 Query 279237 G 279237 | Sbjct 1164774 G 1164774 >seq1 Length=11693564 Score = 300 bits (332), Expect = 4e-76 Identities = 610/892 (68%), Gaps = 19/892 (2%) Strand=Plus/Minus Query 110259 AAACTAAATAATATTATCGATTATACTCGTGACTATGATATTGACTATTTTGGTTTCAAA 110318 ||||| ||| | ||||| ||||| | || | |||| | |||||||| || || Sbjct 6015026 AAACTTAATTCTGCTATCGTTTATAACAGAGATTTTGATTTCTCTTATTTTGGATTTAAG 6014967 Query 110319 ACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATTGAACGTCCTCAACAC 110378 || ||||||||| | ||| || | | ||||| | | |||| | || ||||| Sbjct 6014966 ACACTTGAACGTTCATATCTATTAAAAATAAATGGGAAAGTTGCTGAAAGACCACAACAT 6014907 Query 110379 ATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAAGCTGTTATTGAATGT 110438 | || | ||||| || |||| |||||||| |||||||||| ||||||||||| Sbjct 6014906 TTATTAATGCGTGTGGCAGTTGGAATTCATGGGGATGATATTAATTCTGTTATTGAAACA 6014847 Query 110439 TATGATGTAT-TAAGTAAAAAGAAAGCTATTCATGCTACTCCTACCCTATTTAACGCAGG 110497 ||||| ||| | | | ||| || |||||| |||| || ||||||| ||||| Sbjct 6014846 TATGAC-TATATGTCTCAGAAGTGGTTTACTCATGCCTCTCCAACATTATTTAATGCAGG 6014788 Query 110498 AACTAATGGAGGACAATTGGCTTCTTGCTTTCTT-CTAGGAATTAACGATGATTCTATTG 110556 ||| | | ||| || |||| || |||||| ||| ||| |||||||| |||| Sbjct 6014787 AACCAGACGTCCACAGCTGTCTTCGTG-TTTCTTACTAACAATGTCTGATGATTCAATTG 6014729 Query 110557 AAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACT-CTGGAGGAATT 110615 ||||||| |||||| |||||||| || ||| | ||||| |||| || |||| || ||| Sbjct 6014728 AAGGTATATATGATACTCTTAAACAATGTGCATTAATTTC-AAAATCTGCTGGCGGTATT 6014670 Query 110616 GGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCT 110675 || | | |||||| |||||| | || || | ||| | | || ||| | Sbjct 6014669 GGATTGAATGTTCATTGTATTCGTGCTAATGGTTCTTTTATTGGTGGTACAAATGGTACA 6014610 Query 110676 TCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA 110735 || | |||| | | |||||||| ||||| || ||| | || ||| ||||| | ||| Sbjct 6014609 TCTAATGGATTAATACCAATGTTGAGAGTTTTTAACAATACAGCACGCTATGTTGACCAA 6014550 Query 110736 GGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATA 110792 || || ||| ||| ||| |||||||||| ||||| ||||| |||||| | || || Sbjct 6014549 GGGGGAAATAAAAGACCTGGAGCATTTGCTATATATCTAGAACCATGGCATGCTGACATT 6014490 Query 110793 TTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTA 110852 || ||||| || || ||| |||||| ||| ||||||| ||||||| ||||||||| Sbjct 6014489 TTAGAATTTTTGGATCTTAAGAAAAATACAGGCCCTGAAGAAGAAAGAGCTCGTGATTTA 6014430 Query 110853 TTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGC----AT 110908 ||||||| | |||||| | |||||||| ||||||||||| ||| || | | || Sbjct 6014429 TTTTATGGTCTTTGGATTCCTGATTTATTTATGAAACGTGT---AGAGAAAGACTCTTAT 6014373 Query 110909 GTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTT 110968 |||||| | ||||| || || | |||||| || ||| | || | | || Sbjct 6014372 -TGGTCTTTGATGTGCCCCCACGAATGTCCTGGACTTGAGGATACTTGGGGTGAGGCTTT 6014314 Query 110969 TGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTC-GCAAACAAATTCCAGCTC 111027 ||| || | || | || |||||||| | || | ||| | | |||||||| || Sbjct 6014313 TGAGGAATTATATCACAAGTATGAAAATG-AGAAACGTTACAGAAAACAAATAAAGGCCA 6014255 Query 111028 AAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGT 111087 || ||||| || || |||| ||| ||||||| ||||| |||||||| | | Sbjct 6014254 GAGTTATTTGGCAAAAGATTTGTGAAAGTCAAATTGAAACCGGAACACCTTATATGGTTT 6014195 Query 111088 ATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139 | ||||||||| |||||| ||| ||||||| ||| | ||||| ||||| Sbjct 6014194 ACAAAGATCATTGTAATCGTAAAAGTAATCAACAAAATCTTGGAACCATTAA 6014143 >seq14 Length=507912 Score = 134 bits (148), Expect = 3e-26 Identities = 260/374 (70%), Gaps = 16/374 (4%) Strand=Plus/Minus Query 304776 AAGATGATTTGACATTAAAATACTCTGATATCATTAAATATAACAATTTAATTAAGAAAA 304835 |||||||| | ||| |||| |||||||| |||||| ||||||| |||||| |||| Sbjct 422811 AAGATGATCTCACACATAAATTATCTGATATTATTAAAACTAACAATC-AATTAAAAAAA 422753 Query 304836 AGTTAACGAGC-GATTCTAATTCACATTTGGTTATTGAT-----TATTCAAACAATTTAC 304889 ||| ||| | | | | || | |||| || ||||| |||| || | || | Sbjct 422752 AGTGAACAAACTGGTGCTGCTAGACAT---GTAATTGAAGAAGATATTAAATTACTT--C 422698 Query 304890 AATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTA-TGCAGGCATCTCAA 304948 |||||||| |||| || || | ||||| ||| |||| ||| ||| | | | ||| Sbjct 422697 AATATCATGTTGCTACTTTTGTTGATAACTCTATTCCTGGTATTGCTGCTGCTA-CACAA 422639 Query 304949 AGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATT 305008 | |||||| | || |||||| ||| | ||| | | ||||||||||| ||||||||| Sbjct 422638 AAATCTGGGCGTCCATTAAAGTCTATCAAACAAAGGTTGAAAGGTAAAGAAGGTCGTATT 422579 Query 305009 CGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGAT 305068 || || ||| | ||||| ||||||||||||||| ||| | | || || ||||| || Sbjct 422578 CGTGGAAATTTGATGGGTAAACGTGTTGATTTTTCTGCTCGTACAGTTATTACACCAGA- 422520 Query 305069 TCTCAAATTA-GTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACATT 305127 || || ||| ||| || | || ||||||| ||||||| ||| | ||||| Sbjct 422519 TCCAAATTTACCACTTGATACTGTTGGTGTTCCAAGAACAATTGCTCAAAATATGACATT 422460 Query 305128 TCCAGAGAAAGTTA 305141 ||| |||| |||| Sbjct 422459 TCCTGAGATTGTTA 422446 Score = 116 bits (128), Expect = 9e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 |||||| ||| ||| |||| || | || ||| | |||||| |||| || |||||| Sbjct 422287 AGACATATGACTGATGGTGATATTATTGTTTTTAATCGTCAACCAACACTTCACAAAATG 422228 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425 |||||||| |||| ||| ||||| ||| || | | |||||||| | ||| | | Sbjct 422227 AGTATGATGGGGCATAGAGTTAAAGTTTTACCTTGGTCAACATTTCGTATGAATCTTTCT 422168 Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 | || ||||||||||| ||||||||||| |||||||||||| | ||| |||||||| Sbjct 422167 GTAACAACTCCTTATAATGCTGATTTTGATGGTGATGAAATGAATCTTCATTTACCTCAA 422108 Query 305486 TC 305487 || Sbjct 422107 TC 422106 >seq13 Length=859544 Score = 122 bits (134), Expect = 2e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||| |||| ||||| ||| | || || | |||||||| || |||||||| ||| Sbjct 704163 CATTTAGATGATGATGATGTTGTTTTATTTAACCGTCAACCATCTCTTCATAAAATTTCT 704104 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 || ||| |||||| || || || | | ||| || ||||| || |||| | |||| Sbjct 704103 ATAATGTCTCATAGAGCAAAGGTTGTTCCAGGAAGAACTTTTCGTTTTAATGAATGTGCA 704044 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||||| || || ||||| ||||||||||| |||||||||||| | ||| |||||||| Sbjct 704043 TGTACACCATACAATGCTGATTTTGATGGTGATGAAATGAATTTACATTTACCTCAA 703987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810747184735