Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 8e-15 >seq2 Length=16759152 Score = 95.1 bits (104), Expect = 8e-15 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 19946 TCACGAAGATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTAGATTTACCA 20005 ||| ||||| | ||| |||| | |||||||| |||| ||| | | | ||| || Sbjct 13736096 TCAAGAAGAATTATTTTATCTGCATGGAATCCATCTGATCTTGATAAAATGGTTTTGCCT 13736037 Query 20006 CCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTAT 20065 || || ||||| || |||||| | ||| ||||||| ||||| |||||| |||||| Sbjct 13736036 CCATGTCATACTTTAGCTCAATTTTATGTTCAAGATGGAGAATTAAGTTGCCATTTGTAT 13735977 Query 20066 CAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTA 20115 ||||| |||| || | ||||||||||||||||| ||||| || || Sbjct 13735976 CAACGTAGTGGGGATGTTGGTCTTGGTGTTCCATTTAACATTGCTTCATA 13735927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319010675126885