Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq7 80.6 8e-12
seq15 78.8 3e-11
>seq7
Length=598741
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
|||||||||||||||||| |||||||||||||||||| ||| ||||||| | |||||
Sbjct 4575 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCGCTGGTTCGATCCCGG 4631
>seq15
Length=455407
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||||||||||||| |||||||||||||||||| ||| | ||||| | |||||
Sbjct 192997 GTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCGCCGGTTCGATCCCGG 193054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849576597075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |