Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 834 0.0
seq2 682 0.0
>seq1
Length=11693564
Score = 834 bits (924), Expect = 0.0
Identities = 1474/2131 (69%), Gaps = 43/2131 (2%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| |||||||| | || || ||||| || ||||| | || | |||| | | |||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 68455 TGCAT---ACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGA 68511
||||| ||| | ||| ||| ||| | || | ||||| ||| | ||||||
Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290
Query 68512 CTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATT 68571
|||||| || ||||| || | ||| || ||||| | || ||| ||||||| |||
Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350
Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATG 68628
||||||| ||| ||| ||| | ||| |||| | ||||| | ||||||| ||
Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410
Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688
|||||| || | ||| || |||| | | ||| ||| |||| | || || ||
Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470
Query 68689 AAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTG 68748
||| || |||| ||||| ||||| || ||||| || || || || | || | | ||||
Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530
Query 68749 TAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT 68808
||||| ||| ||||||||||| | ||||||||||||||| ||||| || ||||||||
Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590
Query 68809 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCT 68868
||||||||||| || || | |||||| |||||| | ||||||| || || | ||
Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCATGTTTTGCAATGTCTGCT 6013650
Query 68869 TTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA 68928
|||| | || ||||||||| | |||| |||| |||||||| | || ||||| |||
Sbjct 6013651 TTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAAGA 6013710
Query 68929 ATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988
|| || || | | ||||||| |||||| |||||||| || || ||||||||| |
Sbjct 6013711 ATACCTTTTGATACTGGAGATCCATCATATGTCTCATAAGGACCATCACGTTCAGCTACT 6013770
Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048
||||| || || ||||| || | ||||||||||| |||||| |||||| || |||
Sbjct 6013771 TCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGTTCT 6013830
Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108
| || | | | ||| |||||| | | ||| ||||||||||| || || ||||||
Sbjct 6013831 TTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAACCCTGA 6013890
Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168
|| |||||||| || || | |||||| ||||||| || ||||| || | |||||||
Sbjct 6013891 ACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAGGATAA 6013950
Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228
||||| | ||| ||||||||||| | |||| || | |||| || | | |||
Sbjct 6013951 TAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACATGAAGT 6014010
Query 69229 T-TGAGAAAATCAAATC--GT---CCATCTATAACA--AACA----TATTCAGTGCTACA 69276
| | |||| | ||| | || ||||||| ||| |||| |||| || || | |
Sbjct 6014011 TGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAGCAATA 6014070
Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGTATTATCTCTGTA 69333
||| |||||||||| || || || |||| | |||| |||| | || || |||
Sbjct 6014071 GATCCTAGATTACATACAGCAACTTCATCTGG---TGCACAATATTCAACAATTTCAGTA 6014127
Query 69334 CATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCG 69393
|||| ||| |||||| || || || |||||||| |||||||| || |||||
Sbjct 6014128 CATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAATGA 6014187
Query 69394 TCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAA 69453
|| ||||||| ||| | || || || |||||||| ||| ||| ||| || ||||
Sbjct 6014188 TCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCCAA 6014247
Query 69454 ACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGTGTATATAG 69512
| || || || |||||| | ||||||| ||||| |||||||| ||||| |||||
Sbjct 6014248 ATAACTCTGGCCTTTATTTGTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-ATATAA 6014306
Query 69513 CCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAA 69572
|| || | || |||||| ||| || | |||||||||||| | || ||||||||
Sbjct 6014307 TTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACATCAA 6014366
Query 69573 TGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTAT 69632
||||| | || | || || ||||||||||||| ||| |||||||||||| |
Sbjct 6014367 AGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGACCATA 6014426
Query 69633 AAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTC 69692
||| | ||| | | ||| | ||||||| ||||||||||| |||||||| | ||| ||
Sbjct 6014427 AAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAAATTC 6014486
Query 69693 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCC 69752
| ||| |||| ||||||||||||||||||||| || | |||| |||| |||||||||
Sbjct 6014487 TAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTATTTCC 6014546
Query 69753 TCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATT 69812
|| || || | || | || || || ||| | ||||||| ||| || || | |||||
Sbjct 6014547 CCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATCCATT 6014606
Query 69813 AGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAG 69872
|||| |||||||||| ||| |||| || || | || |||||| | || | |
Sbjct 6014607 AGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAACATTCAA 6014666
Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932
|| || || || || ||| || |||| ||||| |||| | || |||||||||||
Sbjct 6014667 TCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATATATACC 6014726
Query 69933 CTCTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAG 69991
|| || |||||| || ||||| ||| ||||| ||||| || || || | |
Sbjct 6014727 TTCAATTGAATCATCAGACATTGTTAGTAAG-AAACACGAAGACAGCTGTGGACGTCTGG 6014785
Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG- 70050
|||| |||||||||||||| ||||| || ||||| ||||| || | ||| || || |
Sbjct 6014786 TTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGA---CATATAGT 6014842
Query 70051 --TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCA 70108
|||||||||||| | || | ||||| | ||||||||| | || |||||||| |
Sbjct 6014843 CATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGCATTA 6014902
Query 70109 ACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168
| | ||| || |||| ||| | ||| ||||||||| || || ||||| ||| |
Sbjct 6014903 ATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGTTCAA 6014962
Query 70169 GAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228
| || ||||| |||||||| | | ||| ||||| | |||| ||| ||||||| |
Sbjct 6014963 GTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAATTAA 6015022
Query 70229 GTTTATCCTTATATTTGGTAACTATATCCATAACAG-TAGGTGA--GATAATCGGAGATC 70285
||||||| || ||| | | || | | || | | | || || || |
Sbjct 6015023 GTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTTATCATTGGCAAAT 6015079
Query 70286 GTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtt 70345
|| || || || || | |||||| |||| || ||| | || ||| ||
Sbjct 6015080 GTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAAAACTTT 6015139
Query 70346 tttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAG 70405
| ||||||| || || | ||| || | || ||||| || ||||| |||||||| || |
Sbjct 6015140 TCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCATAATCTG 6015199
Query 70406 GATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTG 70465
|||| ||| || | | || | | ||| |||||||| |||||||||| | ||||
Sbjct 6015200 GATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAACTGTTG 6015259
Query 70466 TAACTCCGTTATATAGCCCTTGAATAACTTT 70496
|| || ||||| | ||||| ||||||||
Sbjct 6015260 ATACACCATTATACAATCCTTGGATAACTTT 6015290
>seq2
Length=16759152
Score = 682 bits (756), Expect = 0.0
Identities = 1435/2120 (68%), Gaps = 51/2120 (2%)
Strand=Plus/Minus
Query 68392 GATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAG 68451
|| || ||||| || | || ||| ||||| || ||||| | || | ||||||| ||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 68452 AAATGCAT---ACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGAT 68508
|||||||| ||| || | |||| |||| | || || || | | | |||
Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361
Query 68509 TGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA 68568
||| |||||| || |||| || | ||| || |||||| ||||| ||||| | |
Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAATGTCTTTTTGTGAA 8586301
Query 68569 ATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGA 68625
|||||||| | ||| ||| ||| | || ||| || | ||||| | ||||||||
Sbjct 8586300 ATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTGA 8586241
Query 68626 ATGGATCCACCATCGGATATAATTATATTCTTGA----TCTCATCATTCCACAATTTTCT 68681
||||||||| || | |||||| || |||| || | |||||||| | ||
Sbjct 8586240 ATGGATCCATTATT---TTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAG 8586185
Query 68682 CTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCT 68741
||||| | | || ||||| | ||| || | |||||| || |||||||| ||||
Sbjct 8586184 AGAAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCG 8586125
Query 68742 ACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGC 68801
| || || |||||| ||||||||||| | ||||||||| ||||| ||||||||||
Sbjct 8586124 CCTTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGA 8586065
Query 68802 AGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGAT 68861
|| ||||| || ||||| || || | ||||| ||| | ||||||| ||| ||
Sbjct 8586064 TGTAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAAT 8586005
Query 68862 TTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTA 68921
|| | |||| | | ||| ||||| | |||| ||| | ||||||||| | ||| ||
Sbjct 8586004 TTCTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATA 8585945
Query 68922 TTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTC 68981
|| |||||||| || ||| || | || ||||||||||| ||| | || |
Sbjct 8585944 CTGAAGAATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTT 8585885
Query 68982 AGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT 69041
| | |||||| || || | |||||| | |||||| ||||| ||||| || ||||
Sbjct 8585884 TGACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATT 8585825
Query 69042 GAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAA 69101
||||||| |||||| | ||| ||||| | ||| | ||||| ||| || |
Sbjct 8585824 AAGATCTTTAGCTTCTGGTGATGTGAAAGGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765
Query 69102 TCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAAT 69161
||| ||||| ||||| || || || | ||| | |||||| ||||||| |
Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705
Query 69162 AGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTC 69221
|||||| |||||||||| ||||||||||| | ||||| ||| | ||| ||| ||
Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATC 8585645
Query 69222 CTTTAGTTTGAGAAAATCAAATCG---------TCCATCTATAACAA---ACATATTCAG 69269
| || | ||| |||||| | | | |||||||| ||||||| ||
Sbjct 8585644 ATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAG 8585585
Query 69270 TGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTC 69329
||| | ||||||| ||||||||| || || || | | | |||||| || || ||
Sbjct 8585584 TGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTC 8585525
Query 69330 TGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACA 69389
||||||||||| |||| | || || || | |||||| |||||||| || |||||
Sbjct 8585524 AGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACA 8585465
Query 69390 GGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTT 69449
|| || |||| ||| | ||| |||||||||||||||||||||| ||| |
Sbjct 8585464 ATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTG 8585405
Query 69450 CCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCT-CTTTTTCATATTGTGTAT 69508
|||||| | ||||| |||||| | | | | ||| || | | |||||||||| |||
Sbjct 8585404 CCAAACAAATCTAGCTTTTATTT-GCTTTCGGAACCTTTTTTCATTTTCATATTTAATAT 8585346
Query 69509 ATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACA 69568
| || || |||| ||| || || || ||| | || |||||||||| |||||||
Sbjct 8585345 AAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACA 8585286
Query 69569 TCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAG 69628
| |||||||| | ||| | | ||| ||||||||||||| ||| |||| ||||||
Sbjct 8585285 TTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTC 8585226
Query 69629 CTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAA 69688
| ||| | ||| | | ||| |||||| ||||| |||||| | | ||| | ||
Sbjct 8585225 CATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAA 8585166
Query 69689 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTAT 69748
| ||||| ||||||| |||||||||||| | || || || | | || ||||||||||
Sbjct 8585165 ATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTAT 8585106
Query 69749 TTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATAC 69808
| || |||||||| | || | ||||| ||||||| || | | ||| || || | ||
Sbjct 8585105 TACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAAC 8585046
Query 69809 CATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAG 69868
|||| ||| ||||||||||| | |||| | |||| || ||||| | |||
Sbjct 8585045 CATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATAC 8584986
Query 69869 ATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATA 69928
|| || |||||||| || ||| || |||| |||||| ||||||| |||||||| |
Sbjct 8584985 TTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAA 8584926
Query 69929 TACCCTCTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGT 69987
| || || || |||||| || |||||| || |||||| || | ||| | |
Sbjct 8584925 TTCCTTCAATAGAATCATCAGCCATTGTTAATAA-AAAACATGACGATAATTGTGCACGA 8584867
Query 69988 ATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGA 70047
|||||| |||||||||||||| || || || ||| | |||||||||| ||| | | |
Sbjct 8584866 GAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TATA 8584808
Query 70048 T-TGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCA 70105
| ||||| |||||||| || | ||||| | || ||||||| |||| || || ||||
Sbjct 8584807 TAAATATGTCTCAATAGCAGAAGCAATATCTTCTCT-ATGAATTGCTATAGCTACTCGCA 8584749
Query 70106 TCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTT 70165
| ||||||| ||||||| ||| || |||||| ||| ||| | || | |||||| ||
Sbjct 8584748 TTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTT 8584689
Query 70166 CCAGAGTTTTAAACCCAAAATA-GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAA 70224
| || ||| |||| |||||||| || || |||| ||| |||| | |||||| ||
Sbjct 8584688 CTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAG 8584630
Query 70225 TTTAGTTTATCCTTATATTT---GGTAACTATATCCATAACAGTAGGTGAGATAATCGGA 70281
| ||||| || ||| ||| | || || | ||| | || | |||
Sbjct 8584629 TCAAGTTTTATTGAATGTTTCTGAATAATTTCATTTATTTCTTTAGTT---ATCAAAGGA 8584573
Query 70282 GATCGTTTACCATT---TTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA 70338
| ||| ||| | ||| | || ||| || ||||||| | ||| || ||| |
Sbjct 8584572 CAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAGAA 8584516
Query 70339 AATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCA 70398
||| ||||| |||| || || ||||||| ||||| || | ||||||| | ||
Sbjct 8584515 AATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTTCA 8584456
Query 70399 TAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCT 70458
|| |||||||||| | | | || || ||||| | ||| || |||| | |||
Sbjct 8584455 TAATCAGGATGTTCAACAAATTTACTTGCAGCAATTTCAGAAGCCAAGTTATCAAGTTCA 8584396
Query 70459 ATAGTTGTAACTCCGTTATA 70478
| || ||||| || |||||
Sbjct 8584395 ACTGTAGTAACACCCTTATA 8584376
Score = 271 bits (300), Expect = 1e-67
Identities = 553/807 (69%), Gaps = 21/807 (3%)
Strand=Plus/Minus
Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370
|||||||| || | ||| || |||||| ||| |||||| || ||||| ||||| ||
Sbjct 14764754 GACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTTGTTTTTCCC 14764695
Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttA-AA 39429
|| | ||| ||||| |||| |||||||| || || | ||||||| |||| | ||
Sbjct 14764694 TCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGTTTTGAACAA 14764635
Query 39430 TCCTAA-TTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCAC 39488
| ||| ||| | ||| || || ||| |||| || ||||| || |||| ||
Sbjct 14764634 T--TAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-CATTAAAC 14764580
Query 39489 ---AATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGT 39545
| |||||||| || | | ||| || ||||| || || || | || ||||| || |
Sbjct 14764579 GTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTTTCAATAT 14764520
Query 39546 CTACGGCCTCTGTTATTATCGATGTTACTACCT-CATCACTCGGTGGATGCAATAAATGT 39604
| || || | | | || || | ||| ||| | | ||| ||| || | || ||
Sbjct 14764519 CAACTGCATTTTTAATAATTTCTTTTA-TACGTTCTTCAGATGGTT--TGTTTTCAAGGT 14764463
Query 39605 T--TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662
||||||| | ||||||||| |||| |||| ||||||||||| ||| ||||| |
Sbjct 14764462 AACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCAATTCAT 14764403
Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG 39722
| ||| ||| | ||| ||||| | |||||| || || ||||||||||||| |||||| |
Sbjct 14764402 TGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAGCAAATG 14764343
Query 39723 ATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG 39782
| |||||||||||||| ||||| || |||||||| |||| || || ||||| || | |
Sbjct 14764342 AACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAAAAGTAG 14764283
Query 39783 TATCATTAT---GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTG 39839
|| |||| ||||| | |||||||||||||| || | | | | || |
Sbjct 14764282 CATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATGGAAACT 14764223
Query 39840 TTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTA 39899
|||| ||||||||| || | | |||| ||| | || | ||| || || || |
Sbjct 14764222 CATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTTCGATAA 14764163
Query 39900 ACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATC 39959
|||||| || || || ||||| || || || || || || || || | |
Sbjct 14764162 GTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCATAGAAGAAAC 14764103
Query 39960 TTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTC 40019
||| || | |||||| || ||| | ||||||| || ||||||| ||||| || || |
Sbjct 14764102 GTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCATTAACAATAC 14764043
Query 40020 CATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA 40079
||||| ||||||||| || || || ||| || ||||||| | |||| | ||||
Sbjct 14764042 CATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAAAAACGCTCATTGTCTGTC- 14763984
Query 40080 ATTTATT-CCAGTCATTGATATCTTTT 40105
||| ||| |||||| | |||||||||
Sbjct 14763983 ATTGATTCCCAGTCTCTCATATCTTTT 14763957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907640841400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |