Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 834 0.0 seq2 682 0.0 >seq1 Length=11693564 Score = 834 bits (924), Expect = 0.0 Identities = 1474/2131 (69%), Gaps = 43/2131 (2%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || |||||||| | || || ||||| || ||||| | || | |||| | | ||| Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233 Query 68455 TGCAT---ACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGA 68511 ||||| ||| | ||| ||| ||| | || | ||||| ||| | |||||| Sbjct 6013234 TGCATTGAACTACAAA---TGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGT 6013290 Query 68512 CTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATT 68571 |||||| || ||||| || | ||| || ||||| | || ||| ||||||| ||| Sbjct 6013291 GATTGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATT 6013350 Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATG 68628 ||||||| ||| ||| ||| | ||| |||| | ||||| | ||||||| || Sbjct 6013351 TCCCAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATA 6013410 Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688 |||||| || | ||| || |||| | | ||| ||| |||| | || || || Sbjct 6013411 GATCCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATT 6013470 Query 68689 AAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTG 68748 ||| || |||| ||||| ||||| || ||||| || || || || | || | | |||| Sbjct 6013471 AAATCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTG 6013530 Query 68749 TAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT 68808 ||||| ||| ||||||||||| | ||||||||||||||| ||||| || |||||||| Sbjct 6013531 TAAATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAA 6013590 Query 68809 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCT 68868 ||||||||||| || || | |||||| |||||| | ||||||| || || | || Sbjct 6013591 GCAGTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCATGTTTTGCAATGTCTGCT 6013650 Query 68869 TTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA 68928 |||| | || ||||||||| | |||| |||| |||||||| | || ||||| ||| Sbjct 6013651 TTTAAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAAGA 6013710 Query 68929 ATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 || || || | | ||||||| |||||| |||||||| || || ||||||||| | Sbjct 6013711 ATACCTTTTGATACTGGAGATCCATCATATGTCTCATAAGGACCATCACGTTCAGCTACT 6013770 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 ||||| || || ||||| || | ||||||||||| |||||| |||||| || ||| Sbjct 6013771 TCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGTTCT 6013830 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 | || | | | ||| |||||| | | ||| ||||||||||| || || |||||| Sbjct 6013831 TTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAACCCTGA 6013890 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || |||||||| || || | |||||| ||||||| || ||||| || | ||||||| Sbjct 6013891 ACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAGGATAA 6013950 Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228 ||||| | ||| ||||||||||| | |||| || | |||| || | | ||| Sbjct 6013951 TAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACATGAAGT 6014010 Query 69229 T-TGAGAAAATCAAATC--GT---CCATCTATAACA--AACA----TATTCAGTGCTACA 69276 | | |||| | ||| | || ||||||| ||| |||| |||| || || | | Sbjct 6014011 TGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAGCAATA 6014070 Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGTATTATCTCTGTA 69333 ||| |||||||||| || || || |||| | |||| |||| | || || ||| Sbjct 6014071 GATCCTAGATTACATACAGCAACTTCATCTGG---TGCACAATATTCAACAATTTCAGTA 6014127 Query 69334 CATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCG 69393 |||| ||| |||||| || || || |||||||| |||||||| || ||||| Sbjct 6014128 CATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAATGA 6014187 Query 69394 TCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAA 69453 || ||||||| ||| | || || || |||||||| ||| ||| ||| || |||| Sbjct 6014188 TCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCCAA 6014247 Query 69454 ACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGTGTATATAG 69512 | || || || |||||| | ||||||| ||||| |||||||| ||||| ||||| Sbjct 6014248 ATAACTCTGGCCTTTATTTGTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-ATATAA 6014306 Query 69513 CCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAA 69572 || || | || |||||| ||| || | |||||||||||| | || |||||||| Sbjct 6014307 TTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACATCAA 6014366 Query 69573 TGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTAT 69632 ||||| | || | || || ||||||||||||| ||| |||||||||||| | Sbjct 6014367 AGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGACCATA 6014426 Query 69633 AAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTC 69692 ||| | ||| | | ||| | ||||||| ||||||||||| |||||||| | ||| || Sbjct 6014427 AAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAAATTC 6014486 Query 69693 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCC 69752 | ||| |||| ||||||||||||||||||||| || | |||| |||| ||||||||| Sbjct 6014487 TAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTATTTCC 6014546 Query 69753 TCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATT 69812 || || || | || | || || || ||| | ||||||| ||| || || | ||||| Sbjct 6014547 CCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATCCATT 6014606 Query 69813 AGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAG 69872 |||| |||||||||| ||| |||| || || | || |||||| | || | | Sbjct 6014607 AGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAACATTCAA 6014666 Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932 || || || || || ||| || |||| ||||| |||| | || ||||||||||| Sbjct 6014667 TCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATATATACC 6014726 Query 69933 CTCTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAG 69991 || || |||||| || ||||| ||| ||||| ||||| || || || | | Sbjct 6014727 TTCAATTGAATCATCAGACATTGTTAGTAAG-AAACACGAAGACAGCTGTGGACGTCTGG 6014785 Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG- 70050 |||| |||||||||||||| ||||| || ||||| ||||| || | ||| || || | Sbjct 6014786 TTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGA---CATATAGT 6014842 Query 70051 --TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCA 70108 |||||||||||| | || | ||||| | ||||||||| | || |||||||| | Sbjct 6014843 CATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGCATTA 6014902 Query 70109 ACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 | | ||| || |||| ||| | ||| ||||||||| || || ||||| ||| | Sbjct 6014903 ATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGTTCAA 6014962 Query 70169 GAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228 | || ||||| |||||||| | | ||| ||||| | |||| ||| ||||||| | Sbjct 6014963 GTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAATTAA 6015022 Query 70229 GTTTATCCTTATATTTGGTAACTATATCCATAACAG-TAGGTGA--GATAATCGGAGATC 70285 ||||||| || ||| | | || | | || | | | || || || | Sbjct 6015023 GTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTTATCATTGGCAAAT 6015079 Query 70286 GTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtt 70345 || || || || || | |||||| |||| || ||| | || ||| || Sbjct 6015080 GTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAAAACTTT 6015139 Query 70346 tttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAG 70405 | ||||||| || || | ||| || | || ||||| || ||||| |||||||| || | Sbjct 6015140 TCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCATAATCTG 6015199 Query 70406 GATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTG 70465 |||| ||| || | | || | | ||| |||||||| |||||||||| | |||| Sbjct 6015200 GATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAACTGTTG 6015259 Query 70466 TAACTCCGTTATATAGCCCTTGAATAACTTT 70496 || || ||||| | ||||| |||||||| Sbjct 6015260 ATACACCATTATACAATCCTTGGATAACTTT 6015290 >seq2 Length=16759152 Score = 682 bits (756), Expect = 0.0 Identities = 1435/2120 (68%), Gaps = 51/2120 (2%) Strand=Plus/Minus Query 68392 GATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAG 68451 || || ||||| || | || ||| ||||| || ||||| | || | ||||||| || Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 68452 AAATGCAT---ACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGAT 68508 |||||||| ||| || | |||| |||| | || || || | | | ||| Sbjct 8586417 AAATGCATTGAACTACATA---TACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGAT 8586361 Query 68509 TGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA 68568 ||| |||||| || |||| || | ||| || |||||| ||||| ||||| | | Sbjct 8586360 TGAGATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAATGTCTTTTTGTGAA 8586301 Query 68569 ATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGA 68625 |||||||| | ||| ||| ||| | || ||| || | ||||| | |||||||| Sbjct 8586300 ATTTCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTGA 8586241 Query 68626 ATGGATCCACCATCGGATATAATTATATTCTTGA----TCTCATCATTCCACAATTTTCT 68681 ||||||||| || | |||||| || |||| || | |||||||| | || Sbjct 8586240 ATGGATCCATTATT---TTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAG 8586185 Query 68682 CTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCT 68741 ||||| | | || ||||| | ||| || | |||||| || |||||||| |||| Sbjct 8586184 AGAAATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCG 8586125 Query 68742 ACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGC 68801 | || || |||||| ||||||||||| | ||||||||| ||||| |||||||||| Sbjct 8586124 CCTTGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGA 8586065 Query 68802 AGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGAT 68861 || ||||| || ||||| || || | ||||| ||| | ||||||| ||| || Sbjct 8586064 TGTAGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAAT 8586005 Query 68862 TTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTA 68921 || | |||| | | ||| ||||| | |||| ||| | ||||||||| | ||| || Sbjct 8586004 TTCTTGCTTTAAAATATCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATA 8585945 Query 68922 TTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTC 68981 || |||||||| || ||| || | || ||||||||||| ||| | || | Sbjct 8585944 CTGAAGAATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTT 8585885 Query 68982 AGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT 69041 | | |||||| || || | |||||| | |||||| ||||| ||||| || |||| Sbjct 8585884 TGACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATT 8585825 Query 69042 GAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAA 69101 ||||||| |||||| | ||| ||||| | ||| | ||||| ||| || | Sbjct 8585824 AAGATCTTTAGCTTCTGGTGATGTGAAAGGATACCTCATAAGCAAAAATGTATCAGCAAG 8585765 Query 69102 TCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAAT 69161 ||| ||||| ||||| || || || | ||| | |||||| ||||||| | Sbjct 8585764 TCCTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAG 8585705 Query 69162 AGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTC 69221 |||||| |||||||||| ||||||||||| | ||||| ||| | ||| ||| || Sbjct 8585704 TGGATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATC 8585645 Query 69222 CTTTAGTTTGAGAAAATCAAATCG---------TCCATCTATAACAA---ACATATTCAG 69269 | || | ||| |||||| | | | |||||||| ||||||| || Sbjct 8585644 ATGAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAG 8585585 Query 69270 TGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTC 69329 ||| | ||||||| ||||||||| || || || | | | |||||| || || || Sbjct 8585584 TGCAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTC 8585525 Query 69330 TGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACA 69389 ||||||||||| |||| | || || || | |||||| |||||||| || ||||| Sbjct 8585524 AGTACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACA 8585465 Query 69390 GGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTT 69449 || || |||| ||| | ||| |||||||||||||||||||||| ||| | Sbjct 8585464 ATGATCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTG 8585405 Query 69450 CCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCT-CTTTTTCATATTGTGTAT 69508 |||||| | ||||| |||||| | | | | ||| || | | |||||||||| ||| Sbjct 8585404 CCAAACAAATCTAGCTTTTATTT-GCTTTCGGAACCTTTTTTCATTTTCATATTTAATAT 8585346 Query 69509 ATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACA 69568 | || || |||| ||| || || || ||| | || |||||||||| ||||||| Sbjct 8585345 AAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACA 8585286 Query 69569 TCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAG 69628 | |||||||| | ||| | | ||| ||||||||||||| ||| |||| |||||| Sbjct 8585285 TTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTC 8585226 Query 69629 CTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAA 69688 | ||| | ||| | | ||| |||||| ||||| |||||| | | ||| | || Sbjct 8585225 CATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAA 8585166 Query 69689 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTAT 69748 | ||||| ||||||| |||||||||||| | || || || | | || |||||||||| Sbjct 8585165 ATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTAT 8585106 Query 69749 TTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATAC 69808 | || |||||||| | || | ||||| ||||||| || | | ||| || || | || Sbjct 8585105 TACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAAC 8585046 Query 69809 CATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAG 69868 |||| ||| ||||||||||| | |||| | |||| || ||||| | ||| Sbjct 8585045 CATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATAC 8584986 Query 69869 ATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATA 69928 || || |||||||| || ||| || |||| |||||| ||||||| |||||||| | Sbjct 8584985 TTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAA 8584926 Query 69929 TACCCTCTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGT 69987 | || || || |||||| || |||||| || |||||| || | ||| | | Sbjct 8584925 TTCCTTCAATAGAATCATCAGCCATTGTTAATAA-AAAACATGACGATAATTGTGCACGA 8584867 Query 69988 ATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGA 70047 |||||| |||||||||||||| || || || ||| | |||||||||| ||| | | | Sbjct 8584866 GAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TATA 8584808 Query 70048 T-TGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCA 70105 | ||||| |||||||| || | ||||| | || ||||||| |||| || || |||| Sbjct 8584807 TAAATATGTCTCAATAGCAGAAGCAATATCTTCTCT-ATGAATTGCTATAGCTACTCGCA 8584749 Query 70106 TCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTT 70165 | ||||||| ||||||| ||| || |||||| ||| ||| | || | |||||| || Sbjct 8584748 TTAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTT 8584689 Query 70166 CCAGAGTTTTAAACCCAAAATA-GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAA 70224 | || ||| |||| |||||||| || || |||| ||| |||| | |||||| || Sbjct 8584688 CTAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAG 8584630 Query 70225 TTTAGTTTATCCTTATATTT---GGTAACTATATCCATAACAGTAGGTGAGATAATCGGA 70281 | ||||| || ||| ||| | || || | ||| | || | ||| Sbjct 8584629 TCAAGTTTTATTGAATGTTTCTGAATAATTTCATTTATTTCTTTAGTT---ATCAAAGGA 8584573 Query 70282 GATCGTTTACCATT---TTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA 70338 | ||| ||| | ||| | || ||| || ||||||| | ||| || ||| | Sbjct 8584572 CAATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAGAA 8584516 Query 70339 AATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCA 70398 ||| ||||| |||| || || ||||||| ||||| || | ||||||| | || Sbjct 8584515 AATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTTCA 8584456 Query 70399 TAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCT 70458 || |||||||||| | | | || || ||||| | ||| || |||| | ||| Sbjct 8584455 TAATCAGGATGTTCAACAAATTTACTTGCAGCAATTTCAGAAGCCAAGTTATCAAGTTCA 8584396 Query 70459 ATAGTTGTAACTCCGTTATA 70478 | || ||||| || ||||| Sbjct 8584395 ACTGTAGTAACACCCTTATA 8584376 Score = 271 bits (300), Expect = 1e-67 Identities = 553/807 (69%), Gaps = 21/807 (3%) Strand=Plus/Minus Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370 |||||||| || | ||| || |||||| ||| |||||| || ||||| ||||| || Sbjct 14764754 GACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTTGTTTTTCCC 14764695 Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttA-AA 39429 || | ||| ||||| |||| |||||||| || || | ||||||| |||| | || Sbjct 14764694 TCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGTTTTGAACAA 14764635 Query 39430 TCCTAA-TTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCAC 39488 | ||| ||| | ||| || || ||| |||| || ||||| || |||| || Sbjct 14764634 T--TAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA-CATTAAAC 14764580 Query 39489 ---AATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGT 39545 | |||||||| || | | ||| || ||||| || || || | || ||||| || | Sbjct 14764579 GTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCTTTTCAATAT 14764520 Query 39546 CTACGGCCTCTGTTATTATCGATGTTACTACCT-CATCACTCGGTGGATGCAATAAATGT 39604 | || || | | | || || | ||| ||| | | ||| ||| || | || || Sbjct 14764519 CAACTGCATTTTTAATAATTTCTTTTA-TACGTTCTTCAGATGGTT--TGTTTTCAAGGT 14764463 Query 39605 T--TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662 ||||||| | ||||||||| |||| |||| ||||||||||| ||| ||||| | Sbjct 14764462 AACTAAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAATCAATTCAT 14764403 Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG 39722 | ||| ||| | ||| ||||| | |||||| || || ||||||||||||| |||||| | Sbjct 14764402 TGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGAAGCAAATG 14764343 Query 39723 ATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG 39782 | |||||||||||||| ||||| || |||||||| |||| || || ||||| || | | Sbjct 14764342 AACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAAAAGTAG 14764283 Query 39783 TATCATTAT---GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTG 39839 || |||| ||||| | |||||||||||||| || | | | | || | Sbjct 14764282 CATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATGGAAACT 14764223 Query 39840 TTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTA 39899 |||| ||||||||| || | | |||| ||| | || | ||| || || || | Sbjct 14764222 CATCTAAAGCATTAAAAAGTTTCATTCTTTCGTCATTGTCACGTATATAGGTTTCGATAA 14764163 Query 39900 ACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATC 39959 |||||| || || || ||||| || || || || || || || || | | Sbjct 14764162 GTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAACCATAGAAGAAAC 14764103 Query 39960 TTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTC 40019 ||| || | |||||| || ||| | ||||||| || ||||||| ||||| || || | Sbjct 14764102 GTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCTCATTAACAATAC 14764043 Query 40020 CATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA 40079 ||||| ||||||||| || || || ||| || ||||||| | |||| | |||| Sbjct 14764042 CATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAAAAACGCTCATTGTCTGTC- 14763984 Query 40080 ATTTATT-CCAGTCATTGATATCTTTT 40105 ||| ||| |||||| | ||||||||| Sbjct 14763983 ATTGATTCCCAGTCTCTCATATCTTTT 14763957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907640841400