Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_029119.1
Length=127726
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
>seq2
Length=16759152
Score = 111 bits (122), Expect = 1e-19
Identities = 201/294 (68%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 126071 TGCATCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCAC 126130
|||||| || ||||| || ||||| |||||||||| || |||| ||||||||
Sbjct 13735824 TGCATCAATGTGATTTTTGTATATATGAGCATCTCCAATAGTGTGAACAAATTCACCTGT 13735883
Query 126131 CTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAA 126190
| | |||||| ||||||||| | ||| || | | || || ||||| || ||
Sbjct 13735884 AGCTATTCCACAAACTTTTGCAATCATATGAGTTAAAAGAGAGTATGAAGCAATGTTAAA 13735943
Query 126191 AGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTC 126250
|||||||| | | | ||| |||| | |||||| || || ||| |||||| || ||
Sbjct 13735944 TGGAACACCAAGACCAACATCCCCACTACGTTGATACAAATGGCAACTTAATTCTCCATC 13736003
Query 126251 TTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGT 126310
||| || ||||||||| | || || || || || || ||||| ||| | ||||
Sbjct 13736004 TTGAACATAAAATTGAGCTAAAGTATGACATGGAGGCAAAACCATTTTATCAAGATCAGA 13736063
Query 126311 AGGATTCCATGCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTG 126364
||||||||||| || | ||| | || || |||||||| || |||||
Sbjct 13736064 TGGATTCCATGCAGATAAAATAATTCTTCTTGAAAAAGGATTGGTCTTTATTTG 13736117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408597727727945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |