Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 856 0.0
seq2 657 0.0
>seq1
Length=11693564
Score = 856 bits (948), Expect = 0.0
Identities = 1484/2138 (69%), Gaps = 57/2138 (3%)
Strand=Plus/Plus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|| |||||||| | || || ||||| |||||||||| || | |||| | | |||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922
||||| | ||| ||| || | || | ||||| ||| | ||| || |
Sbjct 6013234 TGCATTGAACTACAAATGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGTGAT 6013293
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982
||||| || ||||| || | |||||| ||||| | || || ||||||| ||||||
Sbjct 6013294 TGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATTTCC 6013353
Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAA 77039
|||| |||||| ||| || ||| |||| | ||||| | | || ||||| || ||
Sbjct 6013354 CAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATAGAT 6013413
Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099
||| || | ||| || |||| ||| || ||| |||| | || || |||||
Sbjct 6013414 CCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATTAAA 6013473
Query 77100 ACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 77159
|| |||| ||||||||||| || ||||| || ||||| || | || | | |||||||
Sbjct 6013474 TCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTGTAA 6013533
Query 77160 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCA 77219
|| ||| ||||||||||| | ||||||||| ||||| | ||| || ||||| ||||||
Sbjct 6013534 ATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAAGCA 6013593
Query 77220 GTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 77279
|||||||| || || | |||||| |||||| | ||||||| || || | |||||
Sbjct 6013594 GTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCATGTTTTGCAATGTCTGCTTTT 6013653
Query 77280 AGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATT 77339
| | || ||||||||| | ||| ||| |||| ||| | || ||||| |||||
Sbjct 6013654 AAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAAGAATA 6013713
Query 77340 CC----GTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAG 77395
|| | |||| | ||||||| |||||| |||||||| || || ||||||||
Sbjct 6013714 CCTTTTGATACTGG----AGATCCATCATATGTCTCATAAGGACCATCACGTTCAGCTAC 6013769
Query 77396 TTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 77455
|||||| |||||||||||||| | ||||||||||| |||||| |||||| || ||
Sbjct 6013770 TTCACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGTTC 6013829
Query 77456 TTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTG 77515
|| || || | || |||||| | | ||| ||||| ||||| ||||| |||||
Sbjct 6013830 TTTAGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAACCCTG 6013889
Query 77516 AACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATA 77575
||| ||||||||||| || | |||||| |||| || || | ||||| || | ||||||
Sbjct 6013890 AACACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAGGATA 6013949
Query 77576 ATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTT---AACCACGTCCTT 77632
|||||| | || ||||||||||| | |||| || | | ||| ||| || |
Sbjct 6013950 ATAATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACATGAAG 6014009
Query 77633 TAGTTT---AAGAAAATCAAATCTTCCATCTA------TAACAAACATGTTCAAAGCTAT 77683
| |||| | |||| || | | ||||||| |||||| | || | ||| ||
Sbjct 6014010 TTGTTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAGCAAT 6014069
Query 77684 AGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC-ATATTGTATTATCTCGGTAC 77742
|||| |||||||||| || || || |||| | || | ||||| | || || ||||
Sbjct 6014070 AGATCCTAGATTACATACAGCAACTTCATCTG-GTGCACAATATTCAACAATTTCAGTAC 6014128
Query 77743 ATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGC-ATGAG 77801
||| ||| |||||| || || || ||||||||||| || || || ||| | ||||
Sbjct 6014129 ATAAATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAATGA- 6014187
Query 77802 TCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAG 77861
|| || |||| ||| | || || ||||||||||| || ||| ||| || |||
Sbjct 6014188 TCTTTGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCCAA 6014247
Query 77862 ACGACTCTAGCTTTTATCATAGATT--TGTATCGCCTCTCTCTTTCATA-TTGAGTATAT 77918
| ||||| || ||||| | | || |||| || |||| ||||||| ||| | ||||
Sbjct 6014248 ATAACTCTGGCCTTTAT--TTGTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-ATAT 6014304
Query 77919 AGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATC 77978
| ||||| | || |||||| ||| || | |||||| ||||| | |||||||||
Sbjct 6014305 AATTCCTCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACATC 6014364
Query 77979 AATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCA 78038
|| ||||| | | |||| || || ||||||||||| | |||||| ||||| ||| ||
Sbjct 6014365 AAAGACCAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGACCA 6014424
Query 78039 ATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAAC 78098
||||| ||| || | ||| | ||||||| |||||||| || |||||||| | |||
Sbjct 6014425 TAAAATAAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAAAT 6014484
Query 78099 TCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTA 78158
|| | ||| |||| ||||||||||||||||||||| || | ||||||||| ||||||
Sbjct 6014485 TCTAAAATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTATTT 6014544
Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218
|| || || || | ||| | || || || ||| |||||||||||||||| || | ||
Sbjct 6014545 CCCCCTTGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATCCA 6014604
Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278
|||||||| |||||||| ||| |||| || ||| | || |||||| |||| |
Sbjct 6014605 TTAGATGTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATA----CAATGAAC 6014660
Query 78279 AT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTA 78334
|| || || || || || || || |||| || || |||| | ||||| ||
Sbjct 6014661 ATTCAATCCAATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATA 6014720
Query 78335 GATACCCTCTATACTGTCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGAT 78393
||||| || || ||||| || ||||| ||| ||||| ||||| || ||
Sbjct 6014721 TATACCTTCAATTGAATCATCAGACATTGTTAGTAAG-AAACACGAAGACAGCTGTGGAC 6014779
Query 78394 GAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGT 78452
| |||||||||||||||||||| ||||| ||||| |||||||| || | ||| | |
Sbjct 6014780 GTCTGGTTCCTGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATAT 6014839
Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGC 78512
|| | |||||||||||| | || | || || ||||||||| || || ||||||
Sbjct 6014840 AG-TCATATGTTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGC 6014898
Query 78513 ATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTT 78572
|| || | ||| || ||||||||| | || ||||||||| || | ||||| |
Sbjct 6014899 ATTAATAAATGTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGT 6014958
Query 78573 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAA 78632
|| | || ||||| |||||||| | | ||| ||||| | |||| ||| |||||
Sbjct 6014959 TCAAGTGTCTTAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAA 6015018
Query 78633 TTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGT------AGTTGAAATAATA 78686
|| |||||||| | ||| | | || | || ||| | || || ||
Sbjct 6015019 TTAAGTTTATCAGCATGTTTTTTGATGATGT---TGTGAGTTTCCTCACTT---ATCATT 6015072
Query 78687 GGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTA 78746
|| | |||| || || || || | ||||||| |||| || ||| | || |
Sbjct 6015073 GGCAAATGTACTCCTGTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAA 6015132
Query 78747 AATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCA 78806
|| ||| ||||||| || || | |||||| ||||| |||||||||||||| ||||||
Sbjct 6015133 AAACTTTTCTTTGTTTGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCA 6015192
Query 78807 TAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCT 78866
||||| ||||| ||| || | | || | | ||| || |||||| ||||||| ||
Sbjct 6015193 TAATCTGGATGAATTGTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCA 6015252
Query 78867 ATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904
| |||| || |||||||| | |||||| ||||||||
Sbjct 6015253 ACTGTTGATACACCATTATACAATCCTTGGATAACTTT 6015290
>seq2
Length=16759152
Score = 657 bits (728), Expect = 0.0
Identities = 1391/2052 (68%), Gaps = 49/2052 (2%)
Strand=Plus/Minus
Query 76800 GATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAG 76859
|| || ||||| || | || ||| ||||| || ||||||| || | ||||||| ||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 76860 AAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGA 76919
|||||||| | | | |||| | || | || || || | | | || |||
Sbjct 8586417 AAATGCATTGAACTACATATACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGATTGA 8586358
Query 76920 CTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATT 76979
|||||| || |||| || | |||||| |||||| |||||| ||||| | ||||
Sbjct 8586357 GATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAATGTCTTTTTGTGAAATT 8586298
Query 76980 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATG 77036
||||| | |||||| ||| || || ||| || | ||||| | | |||||||||||
Sbjct 8586297 TCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTGAATG 8586238
Query 77037 GAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTT 77096
|| ||| || | || ||| |||| || | |||||||| | || ||
Sbjct 8586237 GATCCATTATTTTCAATTATTTTATTGAGTAATCCTTCATTCCAAATATTAAGAGAAATT 8586178
Query 77097 AAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTG 77156
||| | | || ||||||| ||| || | |||||| |||||||| || |||| | ||
Sbjct 8586177 AAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCCTTGTA 8586118
Query 77157 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAA 77216
|| |||||| ||||||||||| | ||||||||||||||| | |||||||| |||||
Sbjct 8586117 TATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATGTAGAT 8586058
Query 77217 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTAT-C 77275
|| || ||||| || || | ||||| ||| | |||||| | | |||| | |
Sbjct 8586057 GCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTTCTTGC 8585998
Query 77276 TTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAG 77335
||| | |||| ||| ||||| | ||| || | ||||| ||| | ||| || || ||
Sbjct 8585997 TTTAAAATATC-CCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACTGAAG 8585939
Query 77336 AATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAG 77395
|||||| || || || | || ||||||||||| ||| | | | | |
Sbjct 8585938 AATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTTTGACAA 8585879
Query 77396 TTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 77455
|||||| ||||| | ||| || | |||||| ||||| ||||| || |||| |||||
Sbjct 8585878 TTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTAAGATC 8585819
Query 77456 TTGTGCTTCAA-TACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCT 77514
|| ||||| | | | ||| ||||| | ||| | ||| | ||| || | ||| |
Sbjct 8585818 TTTAGCTTCTGGTGATGTGAAA-GGATACCTCATAAGCAAAAATGTATCAGCAAGTCCTT 8585760
Query 77515 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGAT 77574
|||| ||||| ||||| || | ||| | ||| || | ||||||| | ||||
Sbjct 8585759 GAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAGTGGAT 8585700
Query 77575 AATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTA 77634
|| ||||||| || ||||||||||| | |||||| || | ||| ||| || | |
Sbjct 8585699 AAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATCATGAA 8585640
Query 77635 GTTTAAGAAAATCAAATCT---------TCCATCTATAACAA---ACATGTTCAAAGCTA 77682
| | ||| |||||| | | | | |||||||| |||| || | || |
Sbjct 8585639 GCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAGTGCAA 8585580
Query 77683 TAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTAC 77742
| ||||||| ||||||||| || || || | | |||||| || || || ||||
Sbjct 8585579 TTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTCAGTAC 8585520
Query 77743 ATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAG 77801
||||||| |||| | || || || | ||||||||| || || || ||| || |||
Sbjct 8585519 ATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACAATGA- 8585461
Query 77802 TCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAG 77861
|| ||||||| ||| | ||| | || ||||||||||| ||||| ||| | |||
Sbjct 8585460 TCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTGCCAA 8585401
Query 77862 ACGACTCTAGCTTTTATCATAGATTT--GTATCGCCTCTCTCTTTCATATTGAGTATATA 77919
|| | |||||||||||| | | ||| | | | | || ||||||||| | |||| |
Sbjct 8585400 ACAAATCTAGCTTTTAT--TTGCTTTCGGAACCTTTTTTCATTTTCATATTTAATATAAA 8585343
Query 77920 GCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCA 77979
| ||||||| ||| || || || ||| | || || ||||||| || ||||| |
Sbjct 8585342 GTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACATTA 8585283
Query 77980 ATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAA 78039
||||||| | | ||| | | ||| ||||||||||| | ||| || | ||| || ||
Sbjct 8585282 ATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTCCAT 8585223
Query 78040 TAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACT 78099
||||| ||| || | ||| |||||| ||||| || ||| | | ||| | ||| |
Sbjct 8585222 AAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAAATT 8585163
Query 78100 CCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTAC 78159
|||| ||||||| |||||||||||| | || ||||| | | ||||||||||||||||
Sbjct 8585162 CCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTATTAC 8585103
Query 78160 CTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 78219
| |||||||| | ||| | || || |||||||||| | |||||||| || | ||| |
Sbjct 8585102 CACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAACCAT 8585043
Query 78220 TAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATA 78279
| |||| |||||||||||| | |||| | ||||| || ||||| | || ||
Sbjct 8585042 TTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATACTTA 8584983
Query 78280 TCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATAC 78339
|| |||||||| || || || |||| ||| || ||||||| || || || || |
Sbjct 8584982 ATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAATTC 8584923
Query 78340 CCTCTATACTGTCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 78398
| || ||| ||||| || |||||| || |||||| || | ||| | || |
Sbjct 8584922 CTTCAATAGAATCATCAGCCATTGTTAATAA-AAAACATGACGATAATTGTGCACGAGAA 8584864
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGAT-T 78457
|||||||||||||||||||| || || ||||| |||||||||||| ||| | || ||
Sbjct 8584863 GTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TATATAA 8584805
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
||||| |||||||| || | || || | ||||||| ||| ||||| ||||| ||
Sbjct 8584804 ATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTCGCATTAA 8584745
Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577
||||| ||||||||||| || | |||| ||| ||| | || || |||||| ||| |
Sbjct 8584744 CATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTTCTAG 8584685
Query 78578 AGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA 78636
||| |||| |||||||| || || |||| ||| | || | |||||| || | |
Sbjct 8584684 TGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAGTCAA 8584626
Query 78637 GTTTATCTT---TGTATTTGGTAACAAT---ATCCATGACAGTAGTTGAAATAATAGGAG 78690
|||| | || ||| | || || ||| || || | ||||| || | ||||
Sbjct 8584625 GTTT-TATTGAATGTTTCTG--AATAATTTCATTTATTTCTTTAGTT---ATCAAAGGAC 8584572
Query 78691 ATCGTACACCATT---TTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAA 78747
| || |||| | ||| | || ||| ||| ||||||| | ||| || ||| ||
Sbjct 8584571 AATGTTCACCTGTCACATTATGTTT---ATAATTATATAAATCATTCATAACTTCAGAAA 8584515
Query 78748 ATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCAT 78807
|| ||||| |||| || || | ||| | | || || | || |||| | |||
Sbjct 8584514 ATTTATTTTTAGTTTGTTTATGCAAATTTGTAATGGCAATACGAGCTGCTAATTTTTCAT 8584455
Query 78808 AATCAGGATGTT 78819
||||||||||||
Sbjct 8584454 AATCAGGATGTT 8584443
Score = 203 bits (224), Expect = 5e-47
Identities = 545/819 (67%), Gaps = 27/819 (3%)
Strand=Plus/Minus
Query 47826 TCTTCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTA 47885
|| ||| ||||||||| || | ||| ||||||||| || |||||| || |||||
Sbjct 14764763 TCATCTGTAGACATAACACCGAATTTCTGATATTCAGAAACTTTTTTCTCAAAGAAATTT 14764704
Query 47886 GTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtt 47945
||||| || || | ||| ||||| ||||||||||||| || || ||||||||| |
Sbjct 14764703 GTTTTTCCCTCAATTGAAATATTAACCATAAAATCAAAGGGGTTCTTAACATTATAAAGT 14764644
Query 47946 tttttA-AATCCTAA-TTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCA 48003
||| | ||| ||| ||| | || || || || |||| |||||| | ||
Sbjct 14764643 TTTGAACAAT--TAAGTTCCACCAACAAATGGTCAGCTACATATTCAATATATGTA--CA 14764588
Query 48004 TCATTTCAC---AATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTT 48060
|||| || | |||||||| || | | ||| || ||||| || ||||| | || |
Sbjct 14764587 -CATTAAACGTGAGTTCATTCCAATCATATCAACAGGAAGAGCATCTGTAAGGTATTCCT 14764529
Query 48061 GTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGT--GGATA 48118
||| ||| || |||| || || | ||| ||| ||| |||| | |
Sbjct 14764528 TTTCAATATCAACTGCATTTTTAATAATTTCTTTTATACGTTCTTCAGATGGTTTGTTTT 14764469
Query 48119 CAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAAT 48178
||| | | |||||| | || || ||||||| || | || |||||||| |||
Sbjct 14764468 CAAGGTAACT--AAACATAAGGCAGGCGAAATCACGGTGTAATCCCTCATCTCTTGAAAT 14764411
Query 48179 TAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGC 48238
||||| || ||| ||| | || ||||| | |||||||| || ||||||||||| |
Sbjct 14764410 CAATTCATTGGAATGTGTCAATCCTGGCATCAAACCACGTTTCTTCAGCCAAAATATGGA 14764351
Query 48239 CGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC 48298
|| || || ||||||||||| || ||||| || || ||||| || ||| || |||||
Sbjct 14764350 AGCAAATGAACCAGAAAAGAAGATACCTTCAACAGCTGCAAAAGCAATAACTCGTTCTCC 14764291
Query 48299 GTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACA 48355
|| | || | || | ||||| | | ||||||||||| || || | | | |
Sbjct 14764290 AAAAGTAGCATTCTTATCAGCGATCCATCTTAAAGCCCAATCAGCTTTTTTTCTGATAAA 14764231
Query 48356 AGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGT 48415
|| | |||| |||||||| ||||||| ||| || | | | ||||| |
Sbjct 14764230 TGGAAACTCATCTAAAGCATTAA----AAAGTTTCATTCTTTCGTCATTGTCACGTATAT 14764175
Query 48416 ATCTAT-TAAAAGACT---ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATC 48471
| | | | ||| | |||||| || |||||||||||| || || || || || |
Sbjct 14764174 AGGTTTCGATAAGTTTTGAATACATCTCACTGTGAATATTTTCCATGGCAATTTGGAAAC 14764115
Query 48472 CGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCT 48531
| || || | | || || | || || || || || |||||| || |||||||||
Sbjct 14764114 CATAGAAGAAACGTGCCTCGGGAATTTGAACTTCTTTAGAAAATCTCTCGACCAAATTCT 14764055
Query 48532 CATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTT 48591
|||| || || |||||| ||| ||||| || ||||| ||| || ||||||| | |
Sbjct 14764054 CATTAACAATACCATCAGAAGCGGCAAAGAAAGCTAAGACACGTGAAATAAAAAAACGCT 14763995
Query 48592 CGTTGGAAGTCAGTTTATT-CCAGTCATTGATATCTTTT 48629
| ||| |||| || ||| |||||| | |||||||||
Sbjct 14763994 CATTGTCTGTCA-TTGATTCCCAGTCTCTCATATCTTTT 14763957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667627746400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |