Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18] 135 sequences; 43,150,242 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 838 0.0 seq2 713 0.0 >seq1 Length=11693564 Score = 838 bits (928), Expect = 0.0 Identities = 1471/2123 (69%), Gaps = 27/2123 (1%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || |||||||| | || || ||||| |||||||||| || | |||| | | ||| Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 ||||| | ||| ||| || | || | ||||| ||| | ||| || | Sbjct 6013234 TGCATTGAACTACAAATGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGTGAT 6013293 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 ||||| || ||||| || | |||||| ||||| | || || ||||||| |||||| Sbjct 6013294 TGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATTTCC 6013353 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTA---TTTTGAATGGAT 75634 |||| |||||| ||| || ||| |||| | ||||| | | || ||||| || ||| Sbjct 6013354 CAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATAGAT 6013413 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 || || || ||| || |||| | | ||| ||| |||| | || || ||||| Sbjct 6013414 CCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATTAAA 6013473 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 || |||| ||||||||||| |||||||| || ||||| || | || | || ||||||| Sbjct 6013474 TCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTGTAA 6013533 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 || ||| ||||||||||| | ||||||||| ||||| | ||| || |||||||||||| Sbjct 6013534 ATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAAGCA 6013593 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 || ||||| || || | |||||| |||||| | ||||||| || || | ||||| Sbjct 6013594 GTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCATGTTTTGCAATGTCTGCTTTT 6013653 Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934 | | || ||||||||| | ||| |||| |||| ||| | || ||||| ||||| Sbjct 6013654 AAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAAGAATA 6013713 Query 75935 CCGTT-GCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 || || | || | ||||||| |||||| || |||| || || |||||||| ||| Sbjct 6013714 CCTTTTGATACTGGA-GATCCATCATATGTCTCATAAGGACCATCACGTTCAGCTACTTC 6013772 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 || || || || || || | ||||||||||| |||||| ||||||||| |||| Sbjct 6013773 ACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGTTCTTT 6013832 Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113 || || | | ||||||||| | | ||| ||||||||||| |||| |||||||| Sbjct 6013833 AGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAACCCTGAAC 6013892 Query 76114 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATA 76173 ||||||||||| || | |||||| |||| || || ||||| || | ||| ||||| Sbjct 6013893 ACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAGGATAATA 6013952 Query 76174 ATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTA---ACCACGTCCTTTAG 76230 ||| | ||| ||||||||||| | |||| | | | |||| || || | | | Sbjct 6013953 ATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACATGAAGTTG 6014012 Query 76231 TTTGAGA---AAATCAAATTTTCCATCTA-----TCA-CAAACATATTAAGAGCTATAGA 76281 ||||| | ||| || ||| ||||||| ||| |||| |||||||||| ||||| Sbjct 6014013 TTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAGCAATAGA 6014072 Query 76282 TGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAG 76341 | |||||||||| || || || |||| | ||||| | || || || |||| Sbjct 6014073 TCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAATTTCAGTACATAA 6014132 Query 76342 ATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC-ATGAGTCCT 76400 ||| ||| || || ||||||||||||||||| || || || |||| |||| || | Sbjct 6014133 ATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAATGA-TCTT 6014191 Query 76401 TATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGA 76460 | |||| | | | || ||||| |||||||| || ||| ||| || ||| | | Sbjct 6014192 TGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCCAAATAA 6014251 Query 76461 CTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATA-TTGTGTATATAACCGT 76519 |||| || |||||| | |||| || ||||| ||||||| ||||| |||||| Sbjct 6014252 CTCTGGCCTTTATTTGTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-ATATAATTCC 6014310 Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| | || |||||| ||| || | ||||||||||| | || |||||||| ||| Sbjct 6014311 TCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACATCAAAGAC 6014370 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || | | |||| || || ||||||||||| | |||||| ||||| ||| || |||| Sbjct 6014371 CAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGACCATAAAAT 6014430 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | ||| || | ||| ||||||| |||||||| || |||||||| | || || | | Sbjct 6014431 AAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAAATTCTAAA 6014490 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 || |||| ||||||||||||||||||||| || | | || |||| |||||| || || Sbjct 6014491 ATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTATTTCCCCCT 6014550 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||| | || || || ||| |||||||||||||||| || | || |||||| Sbjct 6014551 TGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATCCATTAGAT 6014610 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 ||||||||||| ||| |||| || ||| ||||||||| | || | | || Sbjct 6014611 GTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAACATTCAATCCA 6014670 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || ||| || |||| ||||| |||| | || ||||| || || || Sbjct 6014671 ATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATATATACCTTCA 6014730 Query 76940 ATACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998 || |||||| || ||||| ||| ||||| ||||| || || | ||||| Sbjct 6014731 ATTGAATCATCAGACATTGTTAGTAAG-AAACACGAAGACAGCTGTGGACGTCTGGTTCC 6014789 Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATG 77057 ||||||||| ||||| ||||| |||||||| ||||| || | ||| | ||| | |||| Sbjct 6014790 TGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATATAG-TCATATG 6014848 Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 |||||||||| | | ||||| ||||||||| || || |||||||| || | || Sbjct 6014849 TTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGCATTAATAAAT 6014908 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 | || |||| ||| || || ||||||||| || | ||||| ||| | || | Sbjct 6014909 GTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGTTCAAGTGTCT 6014968 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237 |||| |||||||| | | ||| ||||| | |||| ||| | ||||| ||||| | Sbjct 6014969 TAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAATTAAGTTTAT 6015028 Query 77238 CCTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATTGGAGATCGTATTCCA 77296 | || ||| | | || | ||| | | | || ||||| | ||| ||| Sbjct 6015029 CAGCATGTTTTTTGATGATGT-TGTGAGTTTCCTCACTTATCATTGGCAAATGTACTCCT 6015087 Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTT 77356 || || || | ||||||| ||||||| ||| | || ||| ||| |||||| Sbjct 6015088 GTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAAAACTTTTCTTTGTT 6015147 Query 77357 TCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGT 77416 | || || | ||| || || || ||||| |||||||| || ||||| || ||||| | Sbjct 6015148 TGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCATAATCTGGATGAATT 6015207 Query 77417 GTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCG 77476 || || | || | | ||| || |||||| |||||||||| | || | || || Sbjct 6015208 GTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAACTGTTGATACACCA 6015267 Query 77477 TTATATAGCCCTTGAATAACTTT 77499 ||||| | ||||| |||||||| Sbjct 6015268 TTATACAATCCTTGGATAACTTT 6015290 >seq2 Length=16759152 Score = 713 bits (790), Expect = 0.0 Identities = 1289/1867 (69%), Gaps = 37/1867 (2%) Strand=Plus/Minus Query 75395 GATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAG 75454 || |||||||| || | || ||| ||||| || ||||||| || | ||||||| || Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418 Query 75455 AAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGA 75514 |||||||| | | | |||| | || | || || || | | | || ||| Sbjct 8586417 AAATGCATTGAACTACATATACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGATTGA 8586358 Query 75515 CTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATT 75574 |||||| || |||| || | |||||| |||||| |||||| ||||| | |||| Sbjct 8586357 GATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAATGTCTTTTTGTGAAATT 8586298 Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATG 75631 ||||| | |||||| ||| || || ||| || | ||||| || | ||||||||||| Sbjct 8586297 TCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTGAATG 8586238 Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGA----TCTCATCATTCCACAATTTTCTCTC 75687 ||||| || | | |||| | || |||| || | |||||||| | || Sbjct 8586237 GATCC---ATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAGA 8586182 Query 75688 GGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCG 75747 ||||| | | || ||||||| ||| |||| |||||| |||||||| || |||| | Sbjct 8586181 AATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCCT 8586122 Query 75748 AGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGT 75807 || || |||||| ||||||||||| | ||||||||||||||| | |||||||| || Sbjct 8586121 TGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATGT 8586062 Query 75808 TGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTT- 75866 || || || ||||| || || | ||||| ||| | |||||| | | |||| Sbjct 8586061 AGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTTC 8586002 Query 75867 TATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATT 75926 | |||| | ||| | ||| ||||| | ||| ||| | ||||| ||| | ||| || | Sbjct 8586001 TTGCTTTAAAATA-TCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943 Query 75927 GTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAG 75986 | |||||||| ||| || || | || ||||||| ||| || | ||| | | Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTTTG 8585883 Query 75987 CTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAA 76046 | ||| || || || | ||||| | |||||| ||||| ||||| || |||||| Sbjct 8585882 ACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTAA 8585823 Query 76047 GATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTC 76106 |||||| ||||| | |||||||| | ||| | ||||| ||| || |||| Sbjct 8585822 GATCTTTAGCTTCTGGTGATGTGAAAGGATACCTCATAAGCAAAAATGTATCAGCAAGTC 8585763 Query 76107 CCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAG 76166 | ||||| ||||| ||||| || | ||| | ||| || | ||||||| | | Sbjct 8585762 CTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAGTG 8585703 Query 76167 GGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCT 76226 | ||| |||||||||| ||||||||||| | |||||| || | ||| ||| || | Sbjct 8585702 GATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATCAT 8585643 Query 76227 TTAGTTTGAGAAAATCAAA---------TTTTCCATCTAT---CACAAACATATTAAGAG 76274 || | ||| ||||| |||| | | ||| |||||||||||||| | Sbjct 8585642 GAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAGTG 8585583 Query 76275 CTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCG 76334 | || ||||||| ||||||||| || || || | | | |||||| || || || | Sbjct 8585582 CAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTCAG 8585523 Query 76335 TGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC-AT 76393 | |||||||| ||| | || ||||| | ||||||||| || || || |||| || Sbjct 8585522 TACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACAAT 8585463 Query 76394 GAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTC 76453 || || ||||||| | | | ||| | |||||||||||||| ||||| ||| | | Sbjct 8585462 GA-TCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTGC 8585404 Query 76454 CAGACGACTCTAGCTTTTATTATAGATTT--GTATCGCTTCTCTCTTTCATATTGTGTAT 76511 || || | |||||||||||| | | ||| | | | || || ||||||||| ||| Sbjct 8585403 CAAACAAATCTAGCTTTTAT--TTGCTTTCGGAACCTTTTTTCATTTTCATATTTAATAT 8585346 Query 76512 ATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACA 76571 | | ||||||| ||| || || || ||| | ||| |||||||||| ||||||| Sbjct 8585345 AAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACA 8585286 Query 76572 TCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAG 76631 | |||||||| | | ||| | | ||| ||||||||||| | ||| || | ||| || Sbjct 8585285 TTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTC 8585226 Query 76632 CAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGA 76691 || ||||| ||| || | ||| |||||| ||||| || ||| | | ||||| | Sbjct 8585225 CATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAA 8585166 Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 | ||||| ||||||| |||||||||||| | || || || | | || |||||||||| Sbjct 8585165 ATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTAT 8585106 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 |||| |||||||| | ||| | ||||| |||||||||| | |||||||| || | | Sbjct 8585105 TACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAAC 8585046 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAG 76871 | || |||| ||||||||||| | |||| | ||||| | |||||||| | ||| Sbjct 8585045 CATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATAC 8584986 Query 76872 ATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGA 76931 || || |||||||| || ||| || |||| |||||| ||||||| |||||||| | Sbjct 8584985 TTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAA 8584926 Query 76932 TGCCCTCTATACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990 | || || ||| |||||| || |||||| || |||||| || | ||| | || Sbjct 8584925 TTCCTTCAATAGAATCATCAGCCATTGTTAATAA-AAAACATGACGATAATTGTGCACGA 8584867 Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050 ||||||||||||||| ||||| || || |||||| | |||||||||| ||| | || | Sbjct 8584866 GAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TATA 8584808 Query 77051 T-TGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCAT 77109 | ||||| |||||| | | | ||||| | ||||||| ||| ||| || ||||| Sbjct 8584807 TAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTCGCAT 8584748 Query 77110 CAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 77169 ||||||| ||||||| ||| ||| | |||| ||| ||| | || || |||||| ||| Sbjct 8584747 TAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTTC 8584688 Query 77170 CAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAAT 77228 | ||| |||| |||||||| || || |||| ||| |||| | |||||| || | Sbjct 8584687 TAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAGT 8584629 Query 77229 TTAGTTT 77235 ||||| Sbjct 8584628 CAAGTTT 8584622 Score = 239 bits (264), Expect = 6e-58 Identities = 572/851 (67%), Gaps = 28/851 (3%) Strand=Plus/Minus Query 46285 TAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGTG---ACATAACTCCCATTTTT 46341 || || ||| |||| || | |||| | ||||| | || ||||||| || | ||| Sbjct 14764796 TAGAAATCGGCATCCAATGTAAAAACACGTTCTTCATCTGTAGACATAACACCGAATTTC 14764737 Query 46342 TGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 46401 || |||||| || |||||| || ||||| ||||| || || | ||| ||||| || Sbjct 14764736 TGATATTCAGAAACTTTTTTCTCAAAGAAATTTGTTTTTCCCTCAATTGAAATATTAACC 14764677 Query 46402 ATAAAATCAAACGGATTAGTAACATTATAAAtttttttA-AATCCTAA-TTCTGAAATCA 46459 ||||||||||| || || |||||||||||| |||| | ||| ||| ||| | || Sbjct 14764676 ATAAAATCAAAGGGGTTCTTAACATTATAAAGTTTTGAACAAT--TAAGTTCCACCAACA 14764619 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCAC---AATTCATTCCTATGA 46516 || || || |||| ||||| || || |||| || | |||||||| || | Sbjct 14764618 AATGGTCAGCTACATATTCAATATATGTA--CA-CATTAAACGTGAGTTCATTCCAATCA 14764562 Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576 | || || ||||| || ||||| | || | ||||||| || |||| || | Sbjct 14764561 TATCAACAGGAAGAGCATCTGTAAGGTATTCCTTTTCAATATCAACTGCATTTTTAATAA 14764502 Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTT--TAAACATTAAACATGC 46634 | | ||| ||| ||| |||| || | || || ||||||| | || || Sbjct 14764501 TTTCTTTTATACGTTCTTCAGATGGTT--TGTTTTCAAGGTAACTAAACATAAGGCAGGC 14764444 Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694 ||||||| || | || |||||||| ||| ||||| || ||| ||| | || || Sbjct 14764443 GAAATCACGGTGTAATCCCTCATCTCTTGAAATCAATTCATTGGAATGTGTCAATCCTGG 14764384 Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754 ||| | ||||| || || ||||||||||| | || || || ||||||||||| || || Sbjct 14764383 CATCAAACCACGTTTCTTCAGCCAAAATATGGAAGCAAATGAACCAGAAAAGAAGATACC 14764324 Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCA 46811 ||| ||||| || || || | || || ||||| || | |||| |||| | ||||| Sbjct 14764323 TTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAAAAGTAGCATTCTTATCAGCGATCCA 14764264 Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 ||| |||||||||||| ||||| | | | | || | |||| ||||||||| || Sbjct 14764263 TCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATGGAAACTCATCTAAAGCATTAAAAAG 14764204 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACT---ATACATTTC 46928 || |||| ||| | || | ||| || || || ||| | |||||| || Sbjct 14764203 TTTCATTCTTTCGTCATTGTCACGTATATAGGTTTCGAT---AAGTTTTGAATACATCTC 14764147 Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTG 46988 ||||| ||||| || || || || || || || || | | ||| || | ||| || Sbjct 14764146 ACTGTGAATATTTTCCATGGCAATTTGGAAACCATAGAAGAAACGTGCCTCGGGAATTTG 14764087 Query 46989 TACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAA 47048 || ||| || |||||| || |||||||||||| || || |||||| ||| ||||| Sbjct 14764086 AACTTCTTTAGAAAATCTCTCGACCAAATTCTCATTAACAATACCATCAGAAGCGGCAAA 14764027 Query 47049 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATT-CCAGTCAT 47107 || || || ||| || ||||||| | |||| | |||| || ||| |||||| Sbjct 14764026 GAAAGCTAAGACACGTGAAATAAAAAAACGCTCATTGTCTGTCA-TTGATTCCCAGTCTC 14763968 Query 47108 TGATATCTTTT 47118 | ||||||||| Sbjct 14763967 TCATATCTTTT 14763957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933196923200