Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 838 0.0
seq2 713 0.0
>seq1
Length=11693564
Score = 838 bits (928), Expect = 0.0
Identities = 1471/2123 (69%), Gaps = 27/2123 (1%)
Strand=Plus/Plus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457
|| |||||||| | || || ||||| |||||||||| || | |||| | | |||
Sbjct 6013174 GCAGGTTTTGTTCTTAAGTAATACATTCCAGTTTTTAATCCACGTTTCCAACTATGAAAA 6013233
Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517
||||| | ||| ||| || | || | ||||| ||| | ||| || |
Sbjct 6013234 TGCATTGAACTACAAATGGCATATGATGGTTTAGCAACATGAAGATTAAGCGATTGTGAT 6013293
Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577
||||| || ||||| || | |||||| ||||| | || || ||||||| ||||||
Sbjct 6013294 TGATCTATAAAAGCACCACGATCAGCAGCCATCTCAATTATATCTTTTTGAGATATTTCC 6013353
Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTA---TTTTGAATGGAT 75634
|||| |||||| ||| || ||| |||| | ||||| | | || ||||| || |||
Sbjct 6013354 CAAACAGTTTTATAAAGTTCTTTAATATTAGGTGGAATTTCTTTAATATTTTGGATAGAT 6013413
Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694
|| || || ||| || |||| | | ||| ||| |||| | || || |||||
Sbjct 6013414 CCATTATTAGCTATTATCTCATTCATTAACTCTTCACTCCATATGTTAAGATCAATTAAA 6013473
Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754
|| |||| ||||||||||| |||||||| || ||||| || | || | || |||||||
Sbjct 6013474 TCTTTAAGAAGATGAGGATTGACAATTTGGAAATCTCCTGAAAGAACACGTCTAGTGTAA 6013533
Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814
|| ||| ||||||||||| | ||||||||| ||||| | ||| || ||||||||||||
Sbjct 6013534 ATGTTAGAAGTATATGGTTCAATAGATTCATTATTTCCTAGAATCTGTGCAGTTGAAGCA 6013593
Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874
|| ||||| || || | |||||| |||||| | ||||||| || || | |||||
Sbjct 6013594 GTTGGCATTGGAGCAAGTAATAAAGAATTTCTTACACCATGTTTTGCAATGTCTGCTTTT 6013653
Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934
| | || ||||||||| | ||| |||| |||| ||| | || ||||| |||||
Sbjct 6013654 AAAGTTTCCCAATCCCATAAATCACTTGGTTTGACATTCCACATGTCATATTGAAGAATA 6013713
Query 75935 CCGTT-GCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993
|| || | || | ||||||| |||||| || |||| || || |||||||| |||
Sbjct 6013714 CCTTTTGATACTGGA-GATCCATCATATGTCTCATAAGGACCATCACGTTCAGCTACTTC 6013772
Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053
|| || || || || || | ||||||||||| |||||| ||||||||| ||||
Sbjct 6013773 ACATGAAGCTTCCAATGCTCCATGGTAAATTGTTTCAAAAATCAACTTATTAAGTTCTTT 6013832
Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113
|| || | | ||||||||| | | ||| ||||||||||| |||| ||||||||
Sbjct 6013833 AGCGGCAGGTGAAGTGAAAGGATAACGCATAAGCATAAATGCATCAGCTAAACCCTGAAC 6013892
Query 76114 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATA 76173
||||||||||| || | |||||| |||| || || ||||| || | ||| |||||
Sbjct 6013893 ACCAATACCAATTGGACGGTGTCTCATATTTGATTTTCTGGCTTCAGGGACAGGATAATA 6013952
Query 76174 ATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTA---ACCACGTCCTTTAG 76230
||| | ||| ||||||||||| | |||| | | | |||| || || | | |
Sbjct 6013953 ATTGACATCAATAATTTTATTCAAATTTTTAGTTAGAATTTTAGAAACAACATGAAGTTG 6014012
Query 76231 TTTGAGA---AAATCAAATTTTCCATCTA-----TCA-CAAACATATTAAGAGCTATAGA 76281
||||| | ||| || ||| ||||||| ||| |||| |||||||||| |||||
Sbjct 6014013 TTTGAAATTAAAAGCAGGTTTACCATCTACAACTTCAACAAATCTATTAAGAGCAATAGA 6014072
Query 76282 TGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAG 76341
| |||||||||| || || || |||| | ||||| | || || || ||||
Sbjct 6014073 TCCTAGATTACATACAGCAACTTCATCTGGTGCACAATATTCAACAATTTCAGTACATAA 6014132
Query 76342 ATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC-ATGAGTCCT 76400
||| ||| || || ||||||||||||||||| || || || |||| |||| || |
Sbjct 6014133 ATTTGAACATTTAATGGTTCCAAGATTTTGTTGATTACTTTTACGATTACAATGA-TCTT 6014191
Query 76401 TATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGA 76460
| |||| | | | || ||||| |||||||| || ||| ||| || ||| | |
Sbjct 6014192 TGTAAACCATATAAGGTGTTCCGGTTTCAATTTGACTTTCACAAATCTTTTGCCAAATAA 6014251
Query 76461 CTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATA-TTGTGTATATAACCGT 76519
|||| || |||||| | |||| || ||||| ||||||| ||||| ||||||
Sbjct 6014252 CTCTGGCCTTTATTTGTTTTCTGTAACGTTTCTCATTTTCATACTTGTG-ATATAATTCC 6014310
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| | || |||||| ||| || | ||||||||||| | || |||||||| |||
Sbjct 6014311 TCAAAAGCCTCACCCCAAGTATCCTCAAGTCCAGGACATTCGTGGGGGCACATCAAAGAC 6014370
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| | | |||| || || ||||||||||| | |||||| ||||| ||| || ||||
Sbjct 6014371 CAATAAGAGTCTTTCTCTACACGTTTCATAAATAAATCAGGAATCCAAAGACCATAAAAT 6014430
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
| ||| || | ||| ||||||| |||||||| || |||||||| | || || | |
Sbjct 6014431 AAATCACGAGCTCTTTCTTCTTCAGGGCCTGTATTTTTCTTAAGATCCAAAAATTCTAAA 6014490
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
|| |||| ||||||||||||||||||||| || | | || |||| |||||| || ||
Sbjct 6014491 ATGTCAGCATGCCATGGTTCTAGATATATAGCAAATGCTCCAGGTCTTTTATTTCCCCCT 6014550
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||| | || || || ||| |||||||||||||||| || | || ||||||
Sbjct 6014551 TGGTCAACATAGCGTGCTGTATTGTTAAAAACTCTCAACATTGGTATTAATCCATTAGAT 6014610
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
||||||||||| ||| |||| || ||| ||||||||| | || | | ||
Sbjct 6014611 GTACCATTTGTACCACCAATAAAAGAACCATTAGCACGAATACAATGAACATTCAATCCA 6014670
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || ||| || |||| ||||| |||| | || ||||| || || ||
Sbjct 6014671 ATACCGCCAGCAGATTTTGAAATTAATGCACATTGTTTAAGAGTATCATATATACCTTCA 6014730
Query 76940 ATACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|| |||||| || ||||| ||| ||||| ||||| || || | |||||
Sbjct 6014731 ATTGAATCATCAGACATTGTTAGTAAG-AAACACGAAGACAGCTGTGGACGTCTGGTTCC 6014789
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATG 77057
||||||||| ||||| ||||| |||||||| ||||| || | ||| | ||| | ||||
Sbjct 6014790 TGCATTAAATAATGTTGGAGAGGCATGAGTAAACCACTTCTGAGACATATAG-TCATATG 6014848
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
|||||||||| | | ||||| ||||||||| || || |||||||| || | ||
Sbjct 6014849 TTTCAATAACAGAATTAATATCATCCCCATGAATTCCAACTGCCACACGCATTAATAAAT 6014908
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
| || |||| ||| || || ||||||||| || | ||||| ||| | || |
Sbjct 6014909 GTTGTGGTCTTTCAGCAACTTTCCCATTTATTTTTAATAGATATGAACGTTCAAGTGTCT 6014968
Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237
|||| |||||||| | | ||| ||||| | |||| ||| | ||||| ||||| |
Sbjct 6014969 TAAATCCAAAATAAGAGAAATCAAAATCTCTGTTATAAACGATAGCAGAATTAAGTTTAT 6015028
Query 77238 CCTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATTGGAGATCGTATTCCA 77296
| || ||| | | || | ||| | | | || ||||| | ||| |||
Sbjct 6015029 CAGCATGTTTTTTGATGATGT-TGTGAGTTTCCTCACTTATCATTGGCAAATGTACTCCT 6015087
Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTT 77356
|| || || | ||||||| ||||||| ||| | || ||| ||| ||||||
Sbjct 6015088 GTTACAGAATGACGATAGTTATATAAGTCACTCATAGCTTCTGAAAAACTTTTCTTTGTT 6015147
Query 77357 TCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGT 77416
| || || | ||| || || || ||||| |||||||| || ||||| || ||||| |
Sbjct 6015148 TGTTTATGCATATTAGAAACAGCAATTCTTGCAGCTAGTATAGCATAATCTGGATGAATT 6015207
Query 77417 GTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCG 77476
|| || | || | | ||| || |||||| |||||||||| | || | || ||
Sbjct 6015208 GTCGTCATACTTGCAGAAACTTCAGCAGCTAAATTATCTAATTCAACTGTTGATACACCA 6015267
Query 77477 TTATATAGCCCTTGAATAACTTT 77499
||||| | ||||| ||||||||
Sbjct 6015268 TTATACAATCCTTGGATAACTTT 6015290
>seq2
Length=16759152
Score = 713 bits (790), Expect = 0.0
Identities = 1289/1867 (69%), Gaps = 37/1867 (2%)
Strand=Plus/Minus
Query 75395 GATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAG 75454
|| |||||||| || | || ||| ||||| || ||||||| || | ||||||| ||
Sbjct 8586477 GAAGCTGGTTTAGTTCTTAAATAATACATTCCCGTTTTTAAGCCACGTTTCCATCCATAA 8586418
Query 75455 AAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGA 75514
|||||||| | | | |||| | || | || || || | | | || |||
Sbjct 8586417 AAATGCATTGAACTACATATACCATAAGTTGGTTTACTTAGATAAAGACTAAGTGATTGA 8586358
Query 75515 CTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATT 75574
|||||| || |||| || | |||||| |||||| |||||| ||||| | ||||
Sbjct 8586357 GATTGATCAATAAAAGGCCCCCGATCAGCAGCCATTCCAATAATGTCTTTTTGTGAAATT 8586298
Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATG 75631
||||| | |||||| ||| || || ||| || | ||||| || | |||||||||||
Sbjct 8586297 TCCCATACAGTTTTATAAAGTTCTTGGATGTCTTTTGGAATATCAGGTATATTTTGAATG 8586238
Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGA----TCTCATCATTCCACAATTTTCTCTC 75687
||||| || | | |||| | || |||| || | |||||||| | ||
Sbjct 8586237 GATCC---ATTATTTTCAATTATTTTATTGAGTAATC-CTTCATTCCAAATATTAAGAGA 8586182
Query 75688 GGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCG 75747
||||| | | || ||||||| ||| |||| |||||| |||||||| || |||| |
Sbjct 8586181 AATTAAATCACGTAGAAGATGAGTATTTACAACTTGAAAATCTCCAGATAAAACTCGCCT 8586122
Query 75748 AGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGT 75807
|| || |||||| ||||||||||| | ||||||||||||||| | |||||||| ||
Sbjct 8586121 TGTATATATATTAGAAGTATATGGTTCAATAGATTCATTGTTTCCAAGAATTTGAGATGT 8586062
Query 75808 TGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTT- 75866
|| || || ||||| || || | ||||| ||| | |||||| | | ||||
Sbjct 8586061 AGATGCTGTAGGCATTGGAGCAATTAATAATGAATTGCGAAGACCAAAACGTATAATTTC 8586002
Query 75867 TATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATT 75926
| |||| | ||| | ||| ||||| | ||| ||| | ||||| ||| | ||| || |
Sbjct 8586001 TTGCTTTAAAATA-TCCCATTCCCATAAATCACTTGGAATAACATTCCACATATCATACT 8585943
Query 75927 GTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAG 75986
| |||||||| ||| || || | || ||||||| ||| || | ||| | |
Sbjct 8585942 GAAGAATTCCTTTGGATGCTGGAGAATCTTTGAATGTTTCATAACATCCATACTTCTTTG 8585883
Query 75987 CTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAA 76046
| ||| || || || | ||||| | |||||| ||||| ||||| || ||||||
Sbjct 8585882 ACAATTCACAGGAAGCTTCAAGTGCACCATGATAAATAGTTTCAAAAATTTTTATATTAA 8585823
Query 76047 GATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTC 76106
|||||| ||||| | |||||||| | ||| | ||||| ||| || ||||
Sbjct 8585822 GATCTTTAGCTTCTGGTGATGTGAAAGGATACCTCATAAGCAAAAATGTATCAGCAAGTC 8585763
Query 76107 CCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAG 76166
| ||||| ||||| ||||| || | ||| | ||| || | ||||||| | |
Sbjct 8585762 CTTGAACACCAATTCCAATTGGACGATGCTTAAGATTTGATAAACGAGCTTCTTCTAGTG 8585703
Query 76167 GGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCT 76226
| ||| |||||||||| ||||||||||| | |||||| || | ||| ||| || |
Sbjct 8585702 GATAAAAATTAATATCAATAATTTTATTTAAATTTCTTGTTACAATTTTTGTCACATCAT 8585643
Query 76227 TTAGTTTGAGAAAATCAAA---------TTTTCCATCTAT---CACAAACATATTAAGAG 76274
|| | ||| ||||| |||| | | ||| |||||||||||||| |
Sbjct 8585642 GAAGCATTTTAAAGTCAAATGTAGGTTTTTTTTCTTTTATAACAACAAACATATTAAGTG 8585583
Query 76275 CTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCG 76334
| || ||||||| ||||||||| || || || | | | |||||| || || || |
Sbjct 8585582 CAATTGATGCTAAATTACAAACAGCAACTTCGCTTGGAGAACAATATTGAATAATTTCAG 8585523
Query 76335 TGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC-AT 76393
| |||||||| ||| | || ||||| | ||||||||| || || || |||| ||
Sbjct 8585522 TACATAGATTTGAACATCTAATCGTTCCTAAATTTTGTTGATTACTTTTACGATTACAAT 8585463
Query 76394 GAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTC 76453
|| || ||||||| | | | ||| | |||||||||||||| ||||| ||| | |
Sbjct 8585462 GA-TCTTTATAAACCATATATGGAATACCAGTTTCAATCTGAGATTCACAAATTTTCTGC 8585404
Query 76454 CAGACGACTCTAGCTTTTATTATAGATTT--GTATCGCTTCTCTCTTTCATATTGTGTAT 76511
|| || | |||||||||||| | | ||| | | | || || ||||||||| |||
Sbjct 8585403 CAAACAAATCTAGCTTTTAT--TTGCTTTCGGAACCTTTTTTCATTTTCATATTTAATAT 8585346
Query 76512 ATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACA 76571
| | ||||||| ||| || || || ||| | ||| |||||||||| |||||||
Sbjct 8585345 AAAGTTCATCAAATTTATCACCAAAACAATTATCAAGACCTGGACATTCATAAGGACACA 8585286
Query 76572 TCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAG 76631
| |||||||| | | ||| | | ||| ||||||||||| | ||| || | ||| ||
Sbjct 8585285 TTAATGACCAATGAAGATCCTGTTCAACACGTTTCATAAATAAATCTGGAACCCAAAGTC 8585226
Query 76632 CAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGA 76691
|| ||||| ||| || | ||| |||||| ||||| || ||| | | ||||| |
Sbjct 8585225 CATAAAATAAATCACGAGCTCTTGCTTCTTCTGGACCTGTGTTTTTTCTTAAATCTAAAA 8585166
Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751
| ||||| ||||||| |||||||||||| | || || || | | || ||||||||||
Sbjct 8585165 ATTCCATTATATCAGCATGCCATGGTTCCAAGTAGATTGCAAATGCCCCAGGTCGTTTAT 8585106
Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811
|||| |||||||| | ||| | ||||| |||||||||| | |||||||| || | |
Sbjct 8585105 TACCACCCTGATCAACATAACGAGCAGTACTATTATAAACACGTAACATTGGTATTAAAC 8585046
Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAG 76871
| || |||| ||||||||||| | |||| | ||||| | |||||||| | |||
Sbjct 8585045 CATTTGATGATCCATTTGTTCCTGCAATAAATGTTCCAGAAGCACGAATTCCAGAGATAC 8584986
Query 76872 ATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGA 76931
|| || |||||||| || ||| || |||| |||||| ||||||| |||||||| |
Sbjct 8584985 TTAATCCAATTCCTCCGGCAGATTTTGAAATTATAGCACATTGTTTCAAAGTGTCATAAA 8584926
Query 76932 TGCCCTCTATACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990
| || || ||| |||||| || |||||| || |||||| || | ||| | ||
Sbjct 8584925 TTCCTTCAATAGAATCATCAGCCATTGTTAATAA-AAAACATGACGATAATTGTGCACGA 8584867
Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050
||||||||||||||| ||||| || || |||||| | |||||||||| ||| | || |
Sbjct 8584866 GAAGTTCCTGCATTAAATAATGTTGGGGAAGCATGAATAAACCATTTTTTAGACA-TATA 8584808
Query 77051 T-TGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCAT 77109
| ||||| |||||| | | | ||||| | ||||||| ||| ||| || |||||
Sbjct 8584807 TAAATATGTCTCAATAGCAGAAGCAATATCTTCTCTATGAATTGCTATAGCTACTCGCAT 8584748
Query 77110 CAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 77169
||||||| ||||||| ||| ||| | |||| ||| ||| | || || |||||| |||
Sbjct 8584747 TAACATATATTGAGGTCTTTCCACAATTTTATCATTGATTCTTAATAAATATGATCGTTC 8584688
Query 77170 CAAAGTTTTAAAACCAAAATA-GTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAAT 77228
| ||| |||| |||||||| || || |||| ||| |||| | |||||| || |
Sbjct 8584687 TAGTGTTCTAAATCCAAAATATGTAAAATTAAAA-TCTTTTTCATTTTCAATAACTGAGT 8584629
Query 77229 TTAGTTT 77235
|||||
Sbjct 8584628 CAAGTTT 8584622
Score = 239 bits (264), Expect = 6e-58
Identities = 572/851 (67%), Gaps = 28/851 (3%)
Strand=Plus/Minus
Query 46285 TAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGTG---ACATAACTCCCATTTTT 46341
|| || ||| |||| || | |||| | ||||| | || ||||||| || | |||
Sbjct 14764796 TAGAAATCGGCATCCAATGTAAAAACACGTTCTTCATCTGTAGACATAACACCGAATTTC 14764737
Query 46342 TGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 46401
|| |||||| || |||||| || ||||| ||||| || || | ||| ||||| ||
Sbjct 14764736 TGATATTCAGAAACTTTTTTCTCAAAGAAATTTGTTTTTCCCTCAATTGAAATATTAACC 14764677
Query 46402 ATAAAATCAAACGGATTAGTAACATTATAAAtttttttA-AATCCTAA-TTCTGAAATCA 46459
||||||||||| || || |||||||||||| |||| | ||| ||| ||| | ||
Sbjct 14764676 ATAAAATCAAAGGGGTTCTTAACATTATAAAGTTTTGAACAAT--TAAGTTCCACCAACA 14764619
Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCAC---AATTCATTCCTATGA 46516
|| || || |||| ||||| || || |||| || | |||||||| || |
Sbjct 14764618 AATGGTCAGCTACATATTCAATATATGTA--CA-CATTAAACGTGAGTTCATTCCAATCA 14764562
Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576
| || || ||||| || ||||| | || | ||||||| || |||| || |
Sbjct 14764561 TATCAACAGGAAGAGCATCTGTAAGGTATTCCTTTTCAATATCAACTGCATTTTTAATAA 14764502
Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTT--TAAACATTAAACATGC 46634
| | ||| ||| ||| |||| || | || || ||||||| | || ||
Sbjct 14764501 TTTCTTTTATACGTTCTTCAGATGGTT--TGTTTTCAAGGTAACTAAACATAAGGCAGGC 14764444
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
||||||| || | || |||||||| ||| ||||| || ||| ||| | || ||
Sbjct 14764443 GAAATCACGGTGTAATCCCTCATCTCTTGAAATCAATTCATTGGAATGTGTCAATCCTGG 14764384
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754
||| | ||||| || || ||||||||||| | || || || ||||||||||| || ||
Sbjct 14764383 CATCAAACCACGTTTCTTCAGCCAAAATATGGAAGCAAATGAACCAGAAAAGAAGATACC 14764324
Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCA 46811
||| ||||| || || || | || || ||||| || | |||| |||| | |||||
Sbjct 14764323 TTCAACAGCTGCAAAAGCAATAACTCGTTCTCCAAAAGTAGCATTCTTATCAGCGATCCA 14764264
Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871
||| |||||||||||| ||||| | | | | || | |||| ||||||||| ||
Sbjct 14764263 TCTTAAAGCCCAATCAGCTTTTTTTCTGATAAATGGAAACTCATCTAAAGCATTAAAAAG 14764204
Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACT---ATACATTTC 46928
|| |||| ||| | || | ||| || || || ||| | |||||| ||
Sbjct 14764203 TTTCATTCTTTCGTCATTGTCACGTATATAGGTTTCGAT---AAGTTTTGAATACATCTC 14764147
Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTG 46988
||||| ||||| || || || || || || || || | | ||| || | ||| ||
Sbjct 14764146 ACTGTGAATATTTTCCATGGCAATTTGGAAACCATAGAAGAAACGTGCCTCGGGAATTTG 14764087
Query 46989 TACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAA 47048
|| ||| || |||||| || |||||||||||| || || |||||| ||| |||||
Sbjct 14764086 AACTTCTTTAGAAAATCTCTCGACCAAATTCTCATTAACAATACCATCAGAAGCGGCAAA 14764027
Query 47049 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATT-CCAGTCAT 47107
|| || || ||| || ||||||| | |||| | |||| || ||| ||||||
Sbjct 14764026 GAAAGCTAAGACACGTGAAATAAAAAAACGCTCATTGTCTGTCA-TTGATTCCCAGTCTC 14763968
Query 47108 TGATATCTTTT 47118
| |||||||||
Sbjct 14763967 TCATATCTTTT 14763957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933196923200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |