Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq21 105 1e-17 >seq21 Length=626498 Score = 105 bits (116), Expect = 1e-17 Identities = 127/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 135654 AGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGC 135713 ||| ||| | | |||||| |||| || | || || || ||| |||||||| | || Sbjct 447315 AGAGCTTCGTAAATGGGCAGATGCACTTCTAATTGCTCCATTAGATGCAAATACAATGGC 447374 Query 135714 AAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATAC 135773 ||||| || ||||| || || |||||||| || || ||| |||| | |||||||||| Sbjct 447375 CAAAATGGCAAATGGGATTTGTGATAATTTGCTTACATCTCTTGTTCGTGCCTGGGATAA 447434 Query 135774 AAACAAACCACTCATTTTCTG-TCCTGCAATGAATACTCTTATGTGGGAA 135822 || |||||| | ||||| || ||| ||||||||||| |||||||||| Sbjct 447435 TAATAAACCATT-ATTTTTTGCTCCAGCAATGAATACATGTATGTGGGAA 447483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923190026043480