Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=2360143 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||| || || |||||||| ||| || | | || || Sbjct 1035905 ACCAAGTGAAGGGTTGACTCTTTTTGGATGTTGTAATCGGAAAGAGTTCTTCCATCCTCA 1035846 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||||||||||||||| ||||| | |||||||| || || | ||||||||||| | Sbjct 1035845 AGTTGTTTTCCGGCGAAGATCAATCTTTGTTGGTCTGGTGGGATTCCCTCCTTGTCTTGA 1035786 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | || | ||| ||||| | || || || ||| Sbjct 1035785 ATCTTTGACTTGACGTTGTCAATTGTATCAGAAGGCTCTACCTCAAGAGTGATGGTTTTG 1035726 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||| ||||| || ||||| Sbjct 1035725 CCTGTCAAAGTCTTAACAAAAATCTGCAT 1035697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072373607327