Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=5851329 Score = 82.4 bits (90), Expect = 5e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || || || |||||||| || | | || || || |||||||| |||||||||||||| Sbjct 4933836 GCTTTCGCAGCTGTTGAGGGAATATTCTTCTCCGGTTCATTTGCTGCCATATTCTGGCTT 4933895 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || | ||||| ||||| | || || ||||| ||| ||| || || Sbjct 4933896 AAGAAGCGCGGCTTGATGCCTGGGTTAACACACTCAAATGAGTTAATTTCCCGAGATGAG 4933955 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 || |||||| |||| ||||| ||| | ||| || | ||| |||||||| Sbjct 4933956 GGGCTACACCGTGATTTTGCATGTCTTATGTACAGCTACTTGGAGAACAAACC 4934008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231051482561