Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=2360143 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| |||||||| ||||| ||||| ||||| | | || || || || || |||||||| Sbjct 1035888 CTCTTTTTGGATGTTGTAATCGGAAAGAGTTCTTCCATCCTCAAGTTGTTTTCCGGCGAA 1035829 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | || ||||| | || | | ||||||||| ||||| ||||| ||| Sbjct 1035828 GATCAATCTTTGTTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTTGACTTGA-CGT 1035770 Query 46522 CGCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || || || | || || || | |||||||||||||| |||| || |||| Sbjct 1035769 TGTCAATTGTATCAGAAGGCTCTACCTCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTAA 1035710 Query 46581 CAAAGATTTGCAT 46593 |||| || ||||| Sbjct 1035709 CAAAAATCTGCAT 1035697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234252563240