Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq233 657 0.0 seq1 639 2e-178 >seq233 Length=3140 Score = 657 bits (728), Expect = 0.0 Identities = 1448/2170 (67%), Gaps = 86/2170 (4%) Strand=Plus/Plus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || |||||||| |||| | | | || | ||| |||| ||| |||||||| || Sbjct 839 TTTATCAACAGTAAATTTAACAGCACCAACGGCAGGTTTAGTTCTTAAGTAATACATCCC 898 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || ||||| || |||| || | |||||||||| | | | | | ||| || Sbjct 899 CGTTTTTAATCCACGTTTCCAACCGTGGAAATGCATAGAACTACAAATTGCATATGATGG 958 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 | | | ||| | |||||||||||| ||||||||||| ||||| | |||||| || Sbjct 959 TCTAGCGACATGGAGATTAAGAGATTGTGATTGATCAATAAAAGCACCACGATCAGCAGC 1018 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| || | |||| | | || | || |||||||| |||||||||| || |||||| | Sbjct 1019 CATCTCAATAATATCTTTCTGGGAGATTTCCCATACAGTTTTATAAAGTTCTTTAATA-C 1077 Query 47213 TTCTGGGAGATTAGT----ATTTTGAATAGATCCTCCgttttctataattttgtttttta 47268 | |||| || | ||| || |||||||| | |||| |||| || ||| Sbjct 1078 TATTGGGTATTTCTTTTATATTCTGGATAGATCCATTATCAGCTATTATTTCATTCATTA 1137 Query 47269 attcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTT 47328 ||| | | ||| | || ||||| |||| ||| | |||||| ||||| ||||||| Sbjct 1138 GTTCTTCAGTCCATAAGTTAAGTTCAATTAAATCTTTAAGAAGATGTGGATTTACAATTT 1197 Query 47329 GAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATT 47388 | || || ||||| || || | | | || ||||| |||||||||||| || |||| Sbjct 1198 GGAAATCACCAGAAAGGACACGTCTGGAGTAGATATTTGATGTATATGGTTCAATCGATT 1257 Query 47389 CATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTAT 47448 ||||||| |||| |||||| |||||||| || |||||||| | |||| ||| || || Sbjct 1258 CATTATTACCAAGAATTTGGGCAGTTGAGGCAGTAGGCATTGGGGCAAGTAACAAAGAAT 1317 Query 47449 TTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATG 47508 | ||||| |||| ||| || | | ||| ||||| | || || Sbjct 1318 TCCTTACACCATGTTTAGCAATATTTTCTTTCAATGTATCCCAGTCCCATAAATTGCTTG 1377 Query 47509 GAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATG 47568 | |||||||| | |||||| ||||||||||| ||| || || || || ||||| | Sbjct 1378 GCCTGACATTCCACATATCATACTGAAGAATTCCCTTAGATACTGGCGATCCTTTATAAG 1437 Query 47569 TTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATA 47628 ||| ||| || || | ||| ||| | ||||| || ||||| |||| || || | Sbjct 1438 TTTCATAGGGTCCATCGCGTTCAGCCAACTCACATGAAGCCTCCAAAGCACCATGGTAAA 1497 Query 47629 TTGTTTCAAATATTTTTATGTTTAGATTCCTT-GCTTCTGATGATTCAAAAGGATANNNN 47687 ||||||| || ||||| | || || ||| || |||| | ||| ||| ||||| Sbjct 1498 TTGTTTCGAAAATTTTCTTATTAAG-TTCTTTAGCTTGAGGTGAAGTAAATGGATACCTC 1556 Query 47688 NNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTA 47747 |||| ||||||||| ||||||||||||||||| ||||||| || | || Sbjct 1557 ATAAGCATGAATGCATCTGCCAAACCTTGAACACCAATACCTATTGGTCGGTGTCTCATA 1616 Query 47748 TTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNN 47807 ||||| | |||||| || | ||| || | || | ||| ||||| ||||||| | Sbjct 1617 TTAGATTTTTTAGCTTCCGGAACTGGGTAATAATTCACATCGATAATCTTATTTAAATTC 1676 Query 47808 NNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATC--AAACTTGTT----ATT- 47860 ||| | | || | | |||| |||| ||| ||| Sbjct 1677 CTGGTCAAAATTTTAGCAACATAGTGGAGTTGAGTGAAATTGAAAACAGGTTTACCATTC 1736 Query 47861 ----TAT-AACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTT 47915 ||| |||||| |||||||| || ||||| |||||||||||||||| || |||| | Sbjct 1737 TCTGTATCAACAAATCTATTAAGAGCAATAGACCCTAGATTACATACAGCAACTTCATCT 1796 Query 47916 GGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTT 47975 || | ||||| | || |||| ||| |||||| ||| |||||||| || | |||| Sbjct 1797 GGTGAACAATATTCAACAATCTCAGTACAGAGATTAGAACACTTGATAGTTCCAAGATTT 1856 Query 47976 TGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCT 48035 || |||||| | ||||| || || |||| ||| ||||||| || |||||| Sbjct 1857 TGTTGATTACTTTTCCGATTACAATGATCTTTATAAACCATGTAAGGTGTGCCTGTTTCT 1916 Query 48036 ATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTA 48095 ||||| ||| || || ||||| | || || || || ||| | || || Sbjct 1917 ATCTGGCTCTCACAAATCTTTTGCCAAATAACTCTTGCTTTAATTT--GCTTT--CTGTA 1972 Query 48096 ----TTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATC-CCCATACACATTAT 48150 || || | || |||||| | ||||| ||||| |||||||| ||| ||| || | Sbjct 1973 ACGTTTCTCCTCCTCATATTTAATGTATAATTTCTCGAATTCATCACCCCAACA-ATCTT 2031 Query 48151 CTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAG 48210 | | ||||||||||||| ||||||||| || ||||| | ||| || | || | Sbjct 2032 CAAGTCCAGGACATTCATGAGGACACATTAACGACCAGTAAGAATCTTTCTCAACACGTT 2091 Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCA 48269 |||| |||| ||| || | |||||| | ||| || ||||| | | |||| ||||| Sbjct 2092 TCATGAATAAATCAGGAACCCAAAG-CCCATAGAACAAATCTCGTGCTCTTTCCTCTTCT 2150 Query 48270 TTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329 || | ||| | ||||| || ||||| ||||| |||||||||||||||||||||||| Sbjct 2151 GGACCTGTGTTCTTCTTAAGGTCCAGAAATTCCATGATATCAGCATGCCATGGTTCTAAA 2210 Query 48330 TATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTG 48389 |||||||| | | | || || | ||||||||| ||||| || | ||| | || ||||| Sbjct 2211 TATATTGCAAATGCTCCGGGCCTTTTATTACCACCTTGGTCAACATAACGTGCCGTATTA 2270 Query 48390 TTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAA 48449 ||| ||||||| |||||||| | | ||||| ||| | ||||| || || |||| | Sbjct 2271 TTAAAAACTCTCAACATTGGAATTAATCCATTGGATGTCCCATTTGTCCCACCAATAAAT 2330 Query 48450 CTTCCACTAGCTCTTATATTACTA--ATTGAAATACCTATACCACCTGCCATTTTAGATA 48507 ||| |||| || ||| | | ||| || ||| ||||||||||| ||| || | Sbjct 2331 GAACCATTAGCCCTAATACAATGAACATTTAA--ACCGATACCACCTGCAGATTTCGAGA 2388 Query 48508 TTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTA 48567 | | ||| || |||| || || || ||||||||||||||| |||| | ||| ||| Sbjct 2389 TCAAAGCGCATTGTTTCAGTGTGTCGTAAATTCCTTCTATAGAATCACCGGCCATTGTTA 2448 Query 48568 ATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATG 48627 | ||||| ||||| ||| || | | |||||| | ||||||||| ||||| || | Sbjct 2449 GCAAGAAACATGAAGACAGTTGGGGTCGCCTAGTTCCCGCATTAAATAAAGTTGGGGAAG 2508 Query 48628 CATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCC 48687 | ||| ||||||| || | || | | | ||| || |||||||||||| |||||| Sbjct 2509 CGTGAGTAAACCACTTTTGAGACATATAGTCATAAGTCTCAATAACAGAACTTATATCTT 2568 Query 48688 ATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747 | || || || | | |||||||| || | || ||||||||| || ||||||| Sbjct 2569 CTCCGTGAATCCCAACCGCAACACGCATCAATAAATGTTGAGGTCTCTCGGCAATTTTCC 2628 Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAA 48807 || ||| || |||||||| || ||||| || || ||||| ||||| | || Sbjct 2629 CATCTATCTTTAAAAGATAGGAACGCTCCAAAGTCTTGAAACCGAAATAAGAAAAGTCAA 2688 Query 48808 AGTCGTTATCATTAATAATT-----GATGAATTTAT------------------------ 48838 | || | | || || |||| | | ||||||| Sbjct 2689 AATCCCTGTTATAAACAATTGCAGAGTTCAATTTATCAGCATTCTTCAGAATGATATCGT 2748 Query 48839 -TCTTTCCTTA-TGTTTAT----ATACTACATCCATTACATTTTTTGAT-ATAATTGATT 48891 | |||||||| | | || ||| | |||| || || || || | |||||| | Sbjct 2749 GTGTTTCCTTACTTATCATTGGCATATGAACTCCAGTA-ATATTGTGGTGATAATTAA-- 2805 Query 48892 CCTTGTAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAG 48951 | | ||| || | || ||| || | || ||||||| ||||| | || | Sbjct 2806 ------ATAAATCATCCATTACTTCAGAGAAACTCTTCTTTGTTTGCTTATGCATGTTTG 2859 Query 48952 ATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACTAG 49011 | || | ||||| || ||||||||||||||||| |||||||| || || ||||| ||| Sbjct 2860 AAATGGCGATTCTTGCTGCTAATATAGCATAATCAGGATGAATAGTAGT-CATGT--TAG 2916 Query 49012 AT---ATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTT 49068 | ||||||||||| | ||||||| || || | |||||| |||||| ||| | Sbjct 2917 CTGCAATTTCTGCTGCAAGATTATCTAACTCAACTGTTGATACACCATTATATAGTCCCT 2976 Query 49069 GAATAACTTT 49078 | ||||| || Sbjct 2977 GGATAACCTT 2986 >seq1 Length=5851329 Score = 639 bits (708), Expect = 2e-178 Identities = 1250/1851 (68%), Gaps = 39/1851 (2%) Strand=Plus/Minus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || ||| |||| || | ||||| || | ||| |||| |||||| ||||| || Sbjct 2655602 TTTATCAACACTAAATTTCACAGGATTTGCTGCCGGTTTAGTTCTTAAATAGTACATCCC 2655543 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || || ||||| |||| ||||| |||||||| | | || | |||| | || Sbjct 2655542 TGTTTTCAAACCATTTTTCCAACCATAAAAATGCATCGAACTACATATTCCATAAGTTGG 2655483 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 || | ||||| |||||| |||||| ||||| | ||| | ||| | |||| ||| Sbjct 2655482 TTTATTTACATGAAGATTAAGTGATTGAGATTGATCTACAAAAGGACCACGATCAATTGC 2655423 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| || | |||| | ||||||| || ||||| || ||||||| | || | |||| | Sbjct 2655422 CATTTCAATAATAGCTTTTTGTGGAATTTCCCAAACAGTTTTATGGAGTTCTCTAATATG 2655363 Query 47213 TTCTGGGAGAT----TAGTATTTTGAATAGATCCTCCgttttctataattttgtttttta 47268 | ||| | | || ||||||||||||| || ||||| || |||| || | Sbjct 2655362 TAATGGAATGTCGCATA-TATTTTGAATAGACCCATTATTTTCAATTATTTGATTAAGAA 2655304 Query 47269 attcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTT 47328 ||| | ||||| | | |||| | || ||||||| ||| ||||||| Sbjct 2655303 TTTCCTCGTTCCAAATACCAAGGCTAATTAAATCTCGTAGGAGATGAGTATTTACAATTT 2655244 Query 47329 GAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATT 47388 |||| || ||||||| || | | |||||| ||| ||||||||| || ||||||| Sbjct 2655243 GAAAATCACCAGATAAAACCCGTCTTGTATATAAATTTGATGTATATGGCTCAATAGATT 2655184 Query 47389 CATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTAT 47448 ||||| | |||| ||| |||| || || || || ||||| ||| |||||| || || Sbjct 2655183 CATTACTCCCAAGAATCTGAGATGTAGAAGCAGTGGGCATTAATGAAACTAACAATGAAT 2655124 Query 47449 TTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGAT- 47507 | | | ||| |||| || | |||||||| ||| | || || | Sbjct 2655123 TACGAATACCAAATTTAGAAATTTTCTGCTTCAAATTTTTCCAATTCCATAAAT-TGCTC 2655065 Query 47508 GGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATAT 47567 ||| ||| ||| | ||||||||||||||| || ||| || || || |||| | | Sbjct 2655064 GGAGTGACACCCCACATATCATATTGAAGAATCCCCTTAGATACAGGTGATCCATCAAAC 2655005 Query 47568 GTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATAT 47627 |||| ||| || || | | ||||| | |||| | || || | ||||| || ||| Sbjct 2655004 GTTTCATAGGGTCCATGAATCTTAGCTAATTCATAGGAAGCCTCAAGTGCACCATGATAA 2654945 Query 47628 ATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNNN 47687 || |||||||| |||||| | || |||| ||| ||||||| |||| |||| ||||| Sbjct 2654944 ATAGTTTCAAAGATTTTTCTATTAAGATCCCTAGCTTCTGGTGATGCAAATGGATATCTC 2654885 Query 47688 NNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTA 47747 ||||||||||| | |||||| || ||||| ||||| |||| ||| | || Sbjct 2654884 ATGAGTAAAAATGTATCTGCAAGTCCTTGTACTCCAATTCCAATAGGTCGATGTTTGGTA 2654825 Query 47748 TTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNN 47807 || || || |||||| | ||| || | ||| ||||| |||| ||||| | | Sbjct 2654824 TTTGATAAACGTGCTTCTTCAAGTGGGTAATAGTTAATATCAATAACCTTATTCAAATTC 2654765 Query 47808 NNNNNNNNNNNNNNNACAATTTCTCTTAATTTATT-AAAATCAAA------------CTT 47854 ||| | | | || || ||||||||| || Sbjct 2654764 TTTGTCAAAATCTTTGTAATGT-TGTGAAGGAGTTTAAAATCAAAAACAGGTTTTTTCTC 2654706 Query 47855 GTTATTTATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATT 47914 ||| | || ||||| |||||||||| ||||| ||| |||||||||||| || ||||| Sbjct 2654705 TTTAATCATGACAAAATTATTAAGTGCAATAGACCCTAAATTACATACAGCAACTTCATT 2654646 Query 47915 TGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATT 47974 ||| || | |||| | ||||||||||| ||||| ||| || || || || ||||| Sbjct 2654645 AGGAGAAGAAAATTGAACAATTTCAGCACAAAGATTTGAACACTTTATTGTTCCTAAATT 2654586 Query 47975 TTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTC 48034 ||| |||||| | ||||| |||||||||||||||| | || | || ||||| Sbjct 2654585 TTGTTGATTACTTTTACGATTACAATGGTCCTTGTAAAGCATATATGGAATACCCGTTTC 2654526 Query 48035 TATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTA--TAACAGCTCTA--G 48090 ||||||||||||| ||| | ||||| | || || |||| | || || | Sbjct 2654525 TATCTGAGATTCACAGATCTTCTGCCAAATATATCTGGCTTTTACTTGTTTCCTATAACG 2654466 Query 48091 CTTTATTATCATGTTCGTATTTAGTATATAAC--TTCTCAAATTCATCCCCATACACATT 48148 |||| |||| ||| |||| ||| |||| || ||||| ||||| ||| | || Sbjct 2654465 CTTT----TCATTTTCATATT--GTACATAAAGTTTATCAAAATCATCACCAAAACAATC 2654412 Query 48149 ATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCT 48208 | | | || |||||||||||||||||||| || |||||||| ||| ||| || | Sbjct 2654411 ACCAAGACCCGGACATTCATTAGGACACATTAACGACCAATCTGAATCGCTTTCAACACG 2654352 Query 48209 AGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTC 48268 ||||||||| |||||| | |||||| | ||||||||| | | |||| |||||| Sbjct 2654351 TTTCATAAATAAATCTGGAACCCAAAGTCCGTAAAATAAATCACGCGCTCTTTCTTCTTC 2654292 Query 48269 ATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAA 48328 || | || |||| | |||||||| | || ||||| ||||||||||| || || Sbjct 2654291 TGGTCCTGTGTTTTTTTTTAACTCAAGAAATTGGATAATATCCGCATGCCATGGCTCCAA 2654232 Query 48329 ATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATT 48388 |||||| || | | | || |||| ||||||||| ||||| || | ||| | ||||| | Sbjct 2654231 ATATATAGCAAATGCGCCAGGTCTTTTATTACCACCTTGGTCAACATAACGAACAGTACT 2654172 Query 48389 GTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448 || ||||| | |||||| || || | |||||||||| ||||| ||||| |||||| | Sbjct 2654171 ATTGTAAACACGTAACATCGGAACCAAACCATTTGATGACCCATTAGTTCCAGAAATAAA 2654112 Query 48449 ACTTCCACTAGCTCTTATATTACT---AATTGAAATACCTATACCACCTGCCATTTTAGA 48505 | || |||| | || |||| | || ||| |||| || || ||||| || || Sbjct 2654111 AGAGCCTGTAGCACGGATTGTACTGACACTT--AAT-CCTACTCCCCCAGCCATCTTTGA 2654055 Query 48506 TATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATT 48565 || | |||||| ||||| | || ||||| |||||||| ||| |||||| |||| | Sbjct 2654054 AATAACAGCACATCGTTTTAAAGTGTCATAGATTCCTTCAATAGAATCATCGCTCATTGT 2653995 Query 48566 TAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGA 48625 ||| | ||| || | | | || || | || || | ||||||||||||||| || Sbjct 2653994 TAACAAAAAGCAGGAACAAAGCTGGGGTCGTAGGGTGCCGGCATTAAATAATGTTGGTGA 2653935 Query 48626 TGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC 48685 | |||| |||||| || | ||| | || ||||||| | |||| |||| ||||| Sbjct 2653934 TCCATGGATAAACAATCGTTTTGACATATATCTATATGTCTGAATAGCAGATGTAATATC 2653875 Query 48686 CCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTT 48745 ||| || | || | |||||||| | ||||| |||||||||||||||||||| Sbjct 2653874 TTCACCATGAATGGCAATGGCGACACGCATAAGCATATGCTGAGGTCTTTCAACAATTTT 2653815 Query 48746 GTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 | ||||||||||| | ||| ||| || ||||| || || ||||| || Sbjct 2653814 ACTGTTTATTTTCAATAAATACGATCGTTGTAATGTCTTGAATCCAAAGTA 2653764 Score = 260 bits (288), Expect = 2e-64 Identities = 547/811 (67%), Gaps = 32/811 (4%) Strand=Plus/Minus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 |||||| || | ||| |||||||| | || | || ||||||||||| ||||| || || Sbjct 4934282 CATTACACCGAATTTCTGATATTCAGATACCTTCTTCTCAAAGAAATTGGTTTTACCTTC 4934223 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776 | ||| | | |||||||||||||||| ||||| |||||| | |||| || Sbjct 4934222 AATTGAGAGATTAACCATAAAATCAAATGGGTTTTTAGTATTATAAAGCTTTT-GACAAT 4934164 Query 18777 TAA-TTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAAT 18835 ||| ||||| | || ||| || || ||| ||||| ||| | | | | | Sbjct 4934163 TAAGTTCTACCAACAGGTGATCGGCAACGTATTCGATATAATCACACATTAAACCTGAGT 4934104 Query 18836 TCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTG 18895 ||||||| || | | |||||| || ||||| |||||| |||| | || ||| | || | Sbjct 4934103 TCATTCCAATCATATCAACAGGGAGAGCATCAGTAAGATATTCCTTCTCAATACTAACGG 4934044 Query 18896 CCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTAT--------AGAAGATG 18947 | ||| || || | | | |||||| || ||| | || || || Sbjct 4934043 CATCTTTAATTATTTCTTTGATACGTTCTTCA----GATGGTTTGTTCTCCAAGTAGCTG 4933988 Query 18948 TTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATT 19007 | |||| | |||||||||||||| ||||| ||||| |||| || || ||||| Sbjct 4933987 T----ACATAAGACATGCAAAATCACGGTGTAGCCCCTCATCTCGGGAAATTAACTCATT 4933932 Query 19008 AGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGA 19067 || |||||| |||||||||| || | || || | ||||||||| | ||||||||| Sbjct 4933931 TGAGTGTGTTAACCCAGGCATCAAGCCGCGCTTCTTAAGCCAGAATATGGCAGCAAATGA 4933872 Query 19068 TCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC 19127 || || |||||||| || || || ||||| ||||||| || | ||||||| || |||| Sbjct 4933871 ACCGGAGAAGAATATTCCCTCAACAGCTGCGAAAGCAATTACGCGTTCTCCAAAAGTAGC 4933812 Query 19128 ATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGT 19187 || |||| | ||||||| | || ||||||||||| ||||| | | |||| | | Sbjct 4933811 ATTTTTATCAGCAATCCATCTTAGAGCCCAATCAGCTTTCTTCCTGATGAATGGGAATTC 4933752 Query 19188 CTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAA 19247 || | || ||| || || | | | ||||| ||| || ||| | | |||| Sbjct 4933751 ATCCAAAGCATTGAAAAGCTTATTCCTTTCATCCTGATC----ACGAATGTAAGTTTCAA 4933696 Query 19248 TAAACT----GTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAAC 19303 ||| || ||||||||| |||||||||||| || || || || || ||||| ||| Sbjct 4933695 TAAGCTTTGAGTACATTTCACTATGAATATTTTCCATGGCAATTTGGAAACCGTAGAAAA 4933636 Query 19304 ATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTA 19363 | | ||| || | | ||| ||||| | | |||||||| || ||||| || || || | Sbjct 4933635 AGCGTGCCTCAGGGACCTGAACTTCCTTTGAGAATCTTTCAACTAAATTCTCGTTGACAA 4933576 Query 19364 TTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAA---AATGTTTTTCATCTG 19420 | ||||| || |||||||| || ||||| | ||||| || | | ||||||| Sbjct 4933575 TACCATCTGATGCAGCAAAAAAGGCCAATACTCTTGAAATAAAGTAACGCTCATCATCTG 4933516 Query 19421 AGGTTAATGTATTCCAATCATTAATATCTTT 19451 | || || | ||| || || ||||| || Sbjct 4933515 ACATTGAT---TCCCAGTCTTTCATATCCTT 4933488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562104675526680