Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=2360143 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || || |||||||| || || || ||||| Sbjct 1036153 ATGCAGATCTTTGTCAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTAGAGCCTTCT 1036212 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| ||| || |||||||||||| | || ||| ||| Sbjct 1036213 GATACAATTGACAACGTCAAGTCAAAGATTCAAGACAAAGAGGGAATTCCACCAGACCAA 1036272 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | ||||| || || |||||| | || ||| | |||| | |||||||||| Sbjct 1036273 CAAAGATTAATCTTCGCCGGAAAACAACTTGAGGATGGAAGAACTCTTTCCGATTATAAT 1036332 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||||| || || || || ||| |||| Sbjct 1036333 ATTCAAAAGGAGTCAACCCTTCACTTGGT 1036361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425401756627473