Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 2e-11 >seq1 Length=5851329 Score = 86.0 bits (94), Expect = 2e-11 Identities = 109/147 (74%), Gaps = 5/147 (3%) Strand=Plus/Minus Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759 || ||||||||||| |||| |||| |||| || || | |||||||| | || Sbjct 2650379 ATTGTCATACGAGATGGAACGGCATGAGGATTAATAATGATGTCAGGAGATAACCCTTCT 2650320 Query 309760 ATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGC 309818 ||| | |||||||||||||||| | ||||| |||| ||| ||||| || ||||| | Sbjct 2650319 TTTG---TAAAAGGCATATCTTCTTGACGGTAC-ATCATACCCATAGTACCTTTTTGTCC 2650264 Query 309819 GTGCCTGGAAGCAAACTTGTCACCAAT 309845 ||||| || ||||| || |||||||| Sbjct 2650263 ATGCCTTGAGGCAAATTTATCACCAAT 2650237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951959719322536