Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 1e-11 >seq1 Length=5851329 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 37841 GTTATTAATGAAATTAAAACTAACCCTACATCACGCCGTCTAATTGTCAATGGATGGAAT 37900 |||||| || |||| |||| |||||| | ||| | | | || | || |||||| Sbjct 5221673 GTTATTGATCAAATAAAAAACAACCCTTCTTCAAGAAGAATTATCTTATCTGCTTGGAAT 5221732 Query 37901 CCACATGAAGTAGATAAGGCAGCATTGCCACCTTGTCATACA-TTGTTCCAGTTCTTTGT 37959 ||| ||| | ||||| | || || || ||||||||| |||||| | || | ||| Sbjct 5221733 CCATCTGATCTTGATAAAATGGTTTTACCTCCATGTCATACACTTGTTCAATTT-TATGT 5221791 Query 37960 AGAGAATGGAAAACTAAGCTGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGT 38019 | ||||| | |||| ||||| || |||||||| |||| |||| || || || || Sbjct 5221792 TCAAGATGGAGAGTTAAGTTGTCATTTGTATCAACGCAGTGGTGATGTCGGTTTGGGAGT 5221851 Query 38020 TCCATTTAATATTGC 38034 ||||||||| ||||| Sbjct 5221852 TCCATTTAACATTGC 5221866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248807820000571