Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-16 >seq1 Length=5851329 Score = 102 bits (112), Expect = 2e-16 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 279304 TGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGCAATTTTGTGTAGTGCA 279363 ||| |||||| | ||| ||||| || ||||||| |||| ||||||| ||| | Sbjct 5221738 TGATCTTGATAAAATGGTTTTACCTCCATGTCATACACTTGTTCAATTTTATGTTCAAGA 5221797 Query 279364 AGGAAAACTAAGCTGTATTCTGCATCAACGCTCCGCTGATCTATTTTTAGGAGTTCCATT 279423 ||| | |||| ||| | || |||||||| | |||| | ||| ||||||||||| Sbjct 5221798 TGGAGAGTTAAGTTGTCATTTGTATCAACGCAGTGGTGATGTCGGTTTGGGAGTTCCATT 5221857 Query 279424 TAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACAAATTACTGGTTTAGATGT 279483 ||| || | |||||||| | || || ||||||||| ||||| ||| || Sbjct 5221858 TAACATTGCTTCATACTCACTTATGACCCACATGATTGCAAAAATTTGTGGAATAACAAC 5221917 Query 279484 TGGTGAATTTATTTGGAATGGTGGTGATTGTCACATTTATAAAAACCACGTTGA 279537 |||||| ||| || | | ||| ||| ||| |||||||||||||| ||||| Sbjct 5221918 TGGTGATTTTGTTCACACTATTGGCGATGCTCATATTTATAAAAACCATGTTGA 5221971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115162812867103