Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq1 104 1e-17 >seq1 Length=5851329 Score = 104 bits (114), Expect = 1e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 19916 GTTATTAATGAGATTAAAACAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAAT 19975 |||||| || | || |||| ||||| | ||| ||||| | || |||| | ||||||| Sbjct 5221673 GTTATTGATCAAATAAAAAACAACCCTTCTTCAAGAAGAATTATCTTATCTGCTTGGAAT 5221732 Query 19976 CCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTCTTTGTG 20035 || |||| ||| | | | |||||| || || |||||||| ||||||| | ||| Sbjct 5221733 CCATCTGATCTTGATAAAATGGTTTTACCTCCATGTCATACACTTGTTCAATTTTATGTT 5221792 Query 20036 AAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTT 20095 ||||||| | ||| ||| || ||||||||||| |||| ||| | | || ||| Sbjct 5221793 CAAGATGGAGAGTTAAGTTGTCATTTGTATCAACGCAGTGGTGATGTCGGTTTGGGAGTT 5221852 Query 20096 CCATTTAATATTGCATCTTA 20115 |||||||| ||||| || || Sbjct 5221853 CCATTTAACATTGCTTCATA 5221872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319008917773937