Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq220 95.1 3e-15 >seq220 Length=3625 Score = 95.1 bits (104), Expect = 3e-15 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 15467 CCAGAACGGGTAAGCGGGGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTCTTGCGCCA 15526 ||||||||| ||||| ||| | | | || || |||||||| || || | ||||| Sbjct 2999 CCAGAACGGATAAGCACTGTGGGTCAGGCTGGATGGCGTGGAAAAATAGGTTTGTCGCCA 2940 Query 15527 CTTCTTATGCGTGGCCATCGCTGAGGCGACTTTGTTCAGCTCGTCAAACTTGCCGATCCA 15586 || || || | ||||| | || || |||||| ||| || | || || ||||| Sbjct 2939 TTTTTTGTGAATAGCCATACCGGAAGCCACTTTGCGCAGTTCCTGGAATTTCGGTATCCA 2880 Query 15587 GAAATACTCATCCACATACACATGGCCGTGGTAACTCTGCGCTGTTTTGCCATTGGTAGA 15646 |||||||||||||| ||||| || |||| ||| ||||| || || | ||||||| Sbjct 2879 GAAATACTCATCCAGATACAGATTGCCGGTGTAGCTCTGGGCGGTGCGGGCATTGGTGCC 2820 Query 15647 CAGGAAATGCAGCTCAGCGCCATTAGAAAGCGTCATCGGGTTGCC 15691 ||||| | ||| || || |||| |||| |||||| | ||| Sbjct 2819 GAGGAAGTAAAGCGTGGCTCCGTTAGGAAGCACCATCGGATCGCC 2775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108127246280260