Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=2360143 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || |||||||| || ||||| ||||||||||| || | || || || Sbjct 1036153 ATGCAGATCTTTGTCAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTAGAGCCTTCT 1036212 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || ||| ||| |||||||| || |||| || ||| Sbjct 1036213 GATACAATTGACAACGTCAAGTCAAAGATTCAAGACAAAGAGGGAATTCCACCAGACCAA 1036272 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | || || |||||| | || ||| | |||| | ||||||||||| Sbjct 1036273 CAAAGATTAATCTTCGCCGGAAAACAACTTGAGGATGGAAGAACTCTTTCCGATTATAAT 1036332 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| || || || || || || || | ||||| || || || Sbjct 1036333 ATTCAAAAGGAGTCAACCCTTCACTTGGTTCTTCGTCTTCGTGGAGG 1036379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421808182336312