Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7225 89.7 5e-13 >seq7225 Length=5421 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16456 TTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTT 16515 |||||| ||| | || || || ||||||||| || ||||||||||| |||||||| Sbjct 713 TTCCTGCTCATCTCTGATGTAGGTTTCAATCAGTTTGCTATACATTTCTGAATGTATGTT 772 Query 16516 CTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 || ||||| |||||||| ||||| ||| | ||||| || | || ||| ||||| Sbjct 773 TTCAATGGCAATCTGAAAGCCATAAAAGAAGCGAGCTTCAGGTACTTGCACTTC 826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510344840709200