Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25]
167,310 sequences; 291,096,078 total letters
Query= NC_001416.1
Length=48502
Score E
Sequences producing significant alignments: (Bits) Value
seq146581 1090 0.0
>seq146581
Length=609
Score = 1090 bits (1208), Expect = 0.0
Identities = 607/609 (99%), Gaps = 0/609 (0%)
Strand=Plus/Plus
Query 416 GATCTCCAGCCAGGAACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGAC 475
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GATCTCCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGAC 60
Query 476 GCACAGGAACTGAAGAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACT 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCACAGGAACTGAAGAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACT 120
Query 536 TTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGCTCCCCCTGTCG 595
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 121 TTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCCCCCTGTCG 180
Query 596 GTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATC 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATC 240
Query 656 ATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAA 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAA 300
Query 716 TATATCGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACT 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TATATCGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACT 360
Query 776 GTTCAGGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAA 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTTCAGGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAA 420
Query 836 AGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAA 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAA 480
Query 896 TGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTA 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTA 540
Query 956 TTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCT 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCT 600
Query 1016 TATCTGGTT 1024
|||||||||
Sbjct 601 TATCTGGTT 609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154776676550080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |